RNA–Protein interactions for RNA: ENST00000551176.1

ERBB3-218, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 277 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-218ENST00000551176 C1orf53Q5VUE5 145 aa8.83□□□□□ -1
ERBB3-218ENST00000551176 CCDC62Q6P9F0 684 aa8.83□□□□□ -1
ERBB3-218ENST00000551176 NOL8Q76FK4 1167 aaKnown RBP8.83□□□□□ -1
ERBB3-218ENST00000551176 SH3RF1Q7Z6J0 888 aa8.83□□□□□ -1
ERBB3-218ENST00000551176 CCDC82Q8N4S0 544 aa8.83□□□□□ -1
ERBB3-218ENST00000551176 IL31RAQ8NI17 732 aa8.83□□□□□ -1
ERBB3-218ENST00000551176 NSUN6Q8TEA1 469 aaKnown RBP8.83□□□□□ -1
ERBB3-218ENST00000551176 COPS5Q92905 334 aa8.83□□□□□ -1
ERBB3-218ENST00000551176 RRP36Q96EU6 259 aaKnown RBP8.83□□□□□ -1
ERBB3-218ENST00000551176 RMDN3Q96TC7 470 aa8.83□□□□□ -1
ERBB3-218ENST00000551176 GDF15Q99988 308 aa8.83□□□□□ -1
ERBB3-218ENST00000551176 WDR11Q9BZH6 1224 aa8.83□□□□□ -1
ERBB3-218ENST00000551176 MAF1Q9H063 256 aa8.83□□□□□ -1
ERBB3-218ENST00000551176 PXMP2Q9NR77 195 aa8.83□□□□□ -1
ERBB3-218ENST00000551176 ATP11BQ9Y2G3 1177 aa8.83□□□□□ -1
ERBB3-218ENST00000551176 ALPK3Q96L96 1907 aa8.83□□□□□ -1
ERBB3-218ENST00000551176 ZNFX1Q9P2E3 1918 aaKnown RBP8.83□□□□□ -1
ERBB3-218ENST00000551176 GRIN2DO15399 1336 aa8.82□□□□□ -1
ERBB3-218ENST00000551176 SMCHD1A6NHR9 2005 aa8.82□□□□□ -1
ERBB3-218ENST00000551176 KLF18A0A0U1RQI7 1052 aa8.82□□□□□ -1
ERBB3-218ENST00000551176 TRIM43BA6NCK2 446 aa8.82□□□□□ -1
ERBB3-218ENST00000551176 MOXD2PA6NHM9 499 aa8.82□□□□□ -1
ERBB3-218ENST00000551176 ZBTB43O43298 467 aa8.82□□□□□ -1
ERBB3-218ENST00000551176 RGS20O76081 388 aa8.82□□□□□ -1
ERBB3-218ENST00000551176 HMGB1P09429 215 aaKnown RBP8.82□□□□□ -1
ERBB3-218ENST00000551176 RPS6KB1P23443 525 aa8.82□□□□□ -1
ERBB3-218ENST00000551176 ITGB8P26012 769 aa8.82□□□□□ -1
ERBB3-218ENST00000551176 CDC27P30260 824 aa8.82□□□□□ -1
ERBB3-218ENST00000551176 MAGEA10P43363 369 aaPredicted RBP8.82□□□□□ -1
ERBB3-218ENST00000551176 GNAQP50148 359 aa8.82□□□□□ -1
ERBB3-218ENST00000551176 TLE2Q04725 743 aa8.82□□□□□ -1
ERBB3-218ENST00000551176 APOBRQ0VD83 1088 aa8.82□□□□□ -1
ERBB3-218ENST00000551176 FSCN1Q16658 493 aaKnown RBP8.82□□□□□ -1
ERBB3-218ENST00000551176 ARHGEF16Q5VV41 709 aa8.82□□□□□ -1
ERBB3-218ENST00000551176 CXCL17Q6UXB2 119 aa8.82□□□□□ -1
ERBB3-218ENST00000551176 Q6ZUG5 572 aa8.82□□□□□ -1
ERBB3-218ENST00000551176 TRIM43Q96BQ3 446 aaPredicted RBP8.82□□□□□ -1
ERBB3-218ENST00000551176 ZFP91Q96JP5 570 aaPredicted RBP8.82□□□□□ -1
ERBB3-218ENST00000551176 LZTS2Q9BRK4 669 aa8.82□□□□□ -1
ERBB3-218ENST00000551176 PDCD2LQ9BRP1 358 aa8.82□□□□□ -1
ERBB3-218ENST00000551176 Q9Y3F1 56 aa8.82□□□□□ -1
ERBB3-218ENST00000551176 CNTNAP5Q8WYK1 1306 aa8.81□□□□□ -1
ERBB3-218ENST00000551176 GCOM1H8Y6P7 765 aaPredicted RBP8.81□□□□□ -1
ERBB3-218ENST00000551176 MEIS2O14770 477 aa8.81□□□□□ -1
ERBB3-218ENST00000551176 PQBP1O60828 265 aaKnown RBP8.81□□□□□ -1
ERBB3-218ENST00000551176 NR3C2P08235 984 aa8.81□□□□□ -1
ERBB3-218ENST00000551176 POLR2MP0CAP2 368 aa8.81□□□□□ -1
ERBB3-218ENST00000551176 TXNP10599 105 aaKnown RBP8.81□□□□□ -1
ERBB3-218ENST00000551176 CASTP20810 708 aaKnown RBP8.81□□□□□ -1
ERBB3-218ENST00000551176 CDK7P50613 346 aa8.81□□□□□ -1
ERBB3-218ENST00000551176 PGM5Q15124 567 aa8.81□□□□□ -1
ERBB3-218ENST00000551176 RTN1Q16799 776 aa8.81□□□□□ -1
ERBB3-218ENST00000551176 LY6KQ17RY6 165 aa8.81□□□□□ -1
ERBB3-218ENST00000551176 TYW1BQ6NUM6 668 aa8.81□□□□□ -1
ERBB3-218ENST00000551176 USP17L6PQ6QN14 398 aa8.81□□□□□ -1
ERBB3-218ENST00000551176 BLOC1S2Q6QNY1 142 aa8.81□□□□□ -1
ERBB3-218ENST00000551176 SEPT14Q6ZU15 432 aa8.81□□□□□ -1
ERBB3-218ENST00000551176 ANKRD33Q7Z3H0 272 aa8.81□□□□□ -1
ERBB3-218ENST00000551176 FCHSD1Q86WN1 690 aa8.81□□□□□ -1
ERBB3-218ENST00000551176 FBXL16Q8N461 479 aa8.81□□□□□ -1
ERBB3-218ENST00000551176 PCSK9Q8NBP7 692 aaKnown RBP8.81□□□□□ -1
ERBB3-218ENST00000551176 SCFD2Q8WU76 684 aa8.81□□□□□ -1
ERBB3-218ENST00000551176 GPKOWQ92917 476 aaPredicted RBP eCLIP8.81□□□□□ -1
ERBB3-218ENST00000551176 BRF1Q92994 677 aa8.81□□□□□ -1
ERBB3-218ENST00000551176 IWS1Q96ST2 819 aa8.81□□□□□ -1
ERBB3-218ENST00000551176 AGXT2Q9BYV1 514 aa8.81□□□□□ -1
ERBB3-218ENST00000551176 AP5M1Q9H0R1 490 aa8.81□□□□□ -1
ERBB3-218ENST00000551176 SPC25Q9HBM1 224 aa8.81□□□□□ -1
ERBB3-218ENST00000551176 ZSWIM6Q9HCJ5 1215 aa8.81□□□□□ -1
ERBB3-218ENST00000551176 STARD7Q9NQZ5 370 aa8.81□□□□□ -1
ERBB3-218ENST00000551176 PDLIM7Q9NR12 457 aa8.81□□□□□ -1
ERBB3-218ENST00000551176 ELP1O95163 1332 aa8.8□□□□□ -1
ERBB3-218ENST00000551176 FRMPD4Q14CM0 1322 aa8.8□□□□□ -1
ERBB3-218ENST00000551176 LAMA3Q16787 3333 aa8.8□□□□□ -1
ERBB3-218ENST00000551176 PDE4DIPQ5VU43 2346 aa8.8□□□□□ -1
ERBB3-218ENST00000551176 GOLGA8AA7E2F4 631 aa8.8□□□□□ -1
ERBB3-218ENST00000551176 GOLGA8BA8MQT2 603 aa8.8□□□□□ -1
ERBB3-218ENST00000551176 PIK3CDO00329 1044 aa8.8□□□□□ -1
ERBB3-218ENST00000551176 ADAMTS3O15072 1205 aa8.8□□□□□ -1
ERBB3-218ENST00000551176 EPB41L2O43491 1005 aaKnown RBP8.8□□□□□ -1
ERBB3-218ENST00000551176 EIF3JO75822 258 aaKnown RBP8.8□□□□□ -1
ERBB3-218ENST00000551176 SEC24BO95487 1268 aa8.8□□□□□ -1
ERBB3-218ENST00000551176 MYCLP12524 364 aaPredicted RBP8.8□□□□□ -1
ERBB3-218ENST00000551176 ADD1P35611 737 aaKnown RBP8.8□□□□□ -1
ERBB3-218ENST00000551176 FXR1P51114 621 aaKnown RBP eCLIP8.8□□□□□ -1
ERBB3-218ENST00000551176 PSMC6P62333 389 aa8.8□□□□□ -1
ERBB3-218ENST00000551176 MRPS9P82933 396 aaKnown RBP8.8□□□□□ -1
ERBB3-218ENST00000551176 MDM2Q00987 491 aaPredicted RBP8.8□□□□□ -1
ERBB3-218ENST00000551176 ARHGAP1Q07960 439 aa8.8□□□□□ -1
ERBB3-218ENST00000551176 FAAP100Q0VG06 881 aa8.8□□□□□ -1
ERBB3-218ENST00000551176 TRAF1Q13077 416 aa8.8□□□□□ -1
ERBB3-218ENST00000551176 TOB2Q14106 344 aaPredicted RBP8.8□□□□□ -1
ERBB3-218ENST00000551176 PPP2R5BQ15173 497 aa8.8□□□□□ -1
ERBB3-218ENST00000551176 STXBP2Q15833 593 aa8.8□□□□□ -1
ERBB3-218ENST00000551176 WWC2Q6AWC2 1192 aa8.8□□□□□ -1
ERBB3-218ENST00000551176 SYNE3Q6ZMZ3 975 aa8.8□□□□□ -1
ERBB3-218ENST00000551176 RUFY3Q7L099 469 aa8.8□□□□□ -1
ERBB3-218ENST00000551176 HEATR3Q7Z4Q2 680 aa8.8□□□□□ -1
ERBB3-218ENST00000551176 VSIG10LQ86VR7 867 aa8.8□□□□□ -1
ERBB3-218ENST00000551176 SAMD3Q8N6K7 520 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms