RNA–Protein interactions for RNA: ENST00000550659.1

PRDM4-206, Transcript of PR/SET domain 4, humanhuman

TSL 3

Gene PRDM4, Length 837 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-206ENST00000550659 KRT28Q7Z3Y7 464 aa7.53□□□□□ -1.2
PRDM4-206ENST00000550659 LRRTM3Q86VH5 581 aa7.53□□□□□ -1.2
PRDM4-206ENST00000550659 DDX42Q86XP3 938 aaKnown RBP eCLIP7.53□□□□□ -1.2
PRDM4-206ENST00000550659 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.53□□□□□ -1.2
PRDM4-206ENST00000550659 WHAMMQ8TF30 809 aa7.53□□□□□ -1.2
PRDM4-206ENST00000550659 RNF141Q8WVD5 230 aa7.53□□□□□ -1.2
PRDM4-206ENST00000550659 CEP89Q96ST8 783 aa7.53□□□□□ -1.2
PRDM4-206ENST00000550659 IER2Q9BTL4 223 aa7.53□□□□□ -1.2
PRDM4-206ENST00000550659 TARS2Q9BW92 718 aaKnown RBP7.53□□□□□ -1.2
PRDM4-206ENST00000550659 LGR4Q9BXB1 951 aa7.53□□□□□ -1.2
PRDM4-206ENST00000550659 PRR13Q9NZ81 148 aa7.53□□□□□ -1.2
PRDM4-206ENST00000550659 SFMBT1Q9UHJ3 866 aa7.53□□□□□ -1.2
PRDM4-206ENST00000550659 PCDHB12Q9Y5F1 795 aa7.53□□□□□ -1.2
PRDM4-206ENST00000550659 KIF20BQ96Q89 1820 aa7.52□□□□□ -1.2
PRDM4-206ENST00000550659 MED1Q15648 1581 aaPredicted RBP7.52□□□□□ -1.21
PRDM4-206ENST00000550659 NINLQ9Y2I6 1382 aa7.52□□□□□ -1.21
PRDM4-206ENST00000550659 ALG1L2C9J202 215 aa7.52□□□□□ -1.21
PRDM4-206ENST00000550659 GNB5O14775 395 aa7.52□□□□□ -1.21
PRDM4-206ENST00000550659 TOM1O60784 492 aa7.52□□□□□ -1.21
PRDM4-206ENST00000550659 C6orf222P0C671 652 aaPredicted RBP7.52□□□□□ -1.21
PRDM4-206ENST00000550659 SDSP20132 328 aa7.52□□□□□ -1.21
PRDM4-206ENST00000550659 ETV3P41162 512 aa7.52□□□□□ -1.21
PRDM4-206ENST00000550659 EXOSC10Q01780 885 aaKnown RBP7.52□□□□□ -1.21
PRDM4-206ENST00000550659 MIPEPQ99797 713 aa7.52□□□□□ -1.21
PRDM4-206ENST00000550659 CHPF2Q9P2E5 772 aa7.52□□□□□ -1.21
PRDM4-206ENST00000550659 CGGBP1Q9UFW8 167 aaPredicted RBP7.52□□□□□ -1.21
PRDM4-206ENST00000550659 FHOD1Q9Y613 1164 aa7.52□□□□□ -1.21
PRDM4-206ENST00000550659 EDC4Q6P2E9 1401 aaKnown RBP7.52□□□□□ -1.21
PRDM4-206ENST00000550659 FYB1O15117 783 aa7.51□□□□□ -1.21
PRDM4-206ENST00000550659 EFCAB14O75071 495 aa7.51□□□□□ -1.21
PRDM4-206ENST00000550659 HSPA1LP34931 641 aa7.51□□□□□ -1.21
PRDM4-206ENST00000550659 PREPP48147 710 aa7.51□□□□□ -1.21
PRDM4-206ENST00000550659 ZNF445P59923 1031 aa7.51□□□□□ -1.21
PRDM4-206ENST00000550659 GABREP78334 506 aa7.51□□□□□ -1.21
PRDM4-206ENST00000550659 NBPF9Q3BBW0 867 aa7.51□□□□□ -1.21
PRDM4-206ENST00000550659 Q6ZS46 218 aa7.51□□□□□ -1.21
PRDM4-206ENST00000550659 AGGF1Q8N302 714 aaeCLIP7.51□□□□□ -1.21
PRDM4-206ENST00000550659 PPM1KQ8N3J5 372 aa7.51□□□□□ -1.21
PRDM4-206ENST00000550659 AFAP1L2Q8N4X5 818 aa7.51□□□□□ -1.21
PRDM4-206ENST00000550659 GSTCDQ8NEC7 633 aa7.51□□□□□ -1.21
PRDM4-206ENST00000550659 ADCY4Q8NFM4 1077 aa7.51□□□□□ -1.21
PRDM4-206ENST00000550659 SYTL5Q8TDW5 730 aaPredicted RBP7.51□□□□□ -1.21
PRDM4-206ENST00000550659 BTN2A2Q8WVV5 523 aa7.51□□□□□ -1.21
PRDM4-206ENST00000550659 TRIM39Q9HCM9 518 aa7.51□□□□□ -1.21
PRDM4-206ENST00000550659 G3BP2Q9UN86 482 aaKnown RBP7.51□□□□□ -1.21
PRDM4-206ENST00000550659 DIS3Q9Y2L1 958 aaKnown RBP7.51□□□□□ -1.21
PRDM4-206ENST00000550659 ABCA3Q99758 1704 aa7.51□□□□□ -1.21
PRDM4-206ENST00000550659 SPATA31A3Q5VYP0 1347 aa7.51□□□□□ -1.21
PRDM4-206ENST00000550659 USP54Q70EL1 1684 aa7.51□□□□□ -1.21
PRDM4-206ENST00000550659 ANKRD26Q9UPS8 1709 aa7.5□□□□□ -1.21
PRDM4-206ENST00000550659 FAM229AH3BQW9 127 aa7.5□□□□□ -1.21
PRDM4-206ENST00000550659 DLX3O60479 287 aa7.5□□□□□ -1.21
PRDM4-206ENST00000550659 DNAJC8O75937 253 aaPredicted RBP7.5□□□□□ -1.21
PRDM4-206ENST00000550659 SLITRK5O94991 958 aa7.5□□□□□ -1.21
PRDM4-206ENST00000550659 RAB6AP20340 208 aa7.5□□□□□ -1.21
PRDM4-206ENST00000550659 GMPRP36959 345 aa7.5□□□□□ -1.21
PRDM4-206ENST00000550659 MAP4K2Q12851 820 aa7.5□□□□□ -1.21
PRDM4-206ENST00000550659 GRB10Q13322 594 aa7.5□□□□□ -1.21
PRDM4-206ENST00000550659 PRRT3Q5FWE3 981 aa7.5□□□□□ -1.21
PRDM4-206ENST00000550659 ODR4Q5SWX8 454 aa7.5□□□□□ -1.21
PRDM4-206ENST00000550659 NOL9Q5SY16 702 aaKnown RBP7.5□□□□□ -1.21
PRDM4-206ENST00000550659 CC2D1BQ5T0F9 858 aaKnown RBP7.5□□□□□ -1.21
PRDM4-206ENST00000550659 ZNF385CQ66K41 422 aaPredicted RBP7.5□□□□□ -1.21
PRDM4-206ENST00000550659 WWC2Q6AWC2 1192 aa7.5□□□□□ -1.21
PRDM4-206ENST00000550659 HDGFL2Q7Z4V5 671 aaPredicted RBP7.5□□□□□ -1.21
PRDM4-206ENST00000550659 CDH24Q86UP0 819 aa7.5□□□□□ -1.21
PRDM4-206ENST00000550659 UBR7Q8N806 425 aa7.5□□□□□ -1.21
PRDM4-206ENST00000550659 SLC7A14Q8TBB6 771 aa7.5□□□□□ -1.21
PRDM4-206ENST00000550659 DDX1Q92499 740 aaKnown RBP7.5□□□□□ -1.21
PRDM4-206ENST00000550659 CCDC140Q96MF4 163 aa7.5□□□□□ -1.21
PRDM4-206ENST00000550659 PSMG3-AS1Q96PY0 264 aa7.5□□□□□ -1.21
PRDM4-206ENST00000550659 YIPF2Q9BWQ6 316 aa7.5□□□□□ -1.21
PRDM4-206ENST00000550659 CEP41Q9BYV8 373 aa7.5□□□□□ -1.21
PRDM4-206ENST00000550659 TERF2IPQ9NYB0 399 aa7.5□□□□□ -1.21
PRDM4-206ENST00000550659 FBXL21Q9UKT6 434 aa7.5□□□□□ -1.21
PRDM4-206ENST00000550659 OVOS2A0A0J9YW53 1432 aa7.5□□□□□ -1.21
PRDM4-206ENST00000550659 TNS3Q68CZ2 1445 aa7.5□□□□□ -1.21
PRDM4-206ENST00000550659 OVOS2Q6IE36 1432 aa7.5□□□□□ -1.21
PRDM4-206ENST00000550659 NPHP3Q7Z494 1330 aa7.5□□□□□ -1.21
PRDM4-206ENST00000550659 PHRF1Q9P1Y6 1649 aaKnown RBP7.49□□□□□ -1.21
PRDM4-206ENST00000550659 SBNO1A3KN83 1393 aa7.49□□□□□ -1.21
PRDM4-206ENST00000550659 FAM83GA6ND36 823 aa7.49□□□□□ -1.21
PRDM4-206ENST00000550659 SART1O43290 800 aaKnown RBP7.49□□□□□ -1.21
PRDM4-206ENST00000550659 GAS2O43903 313 aaKnown RBP7.49□□□□□ -1.21
PRDM4-206ENST00000550659 CPEP16870 476 aa7.49□□□□□ -1.21
PRDM4-206ENST00000550659 POU3F2P20265 443 aaPredicted RBP7.49□□□□□ -1.21
PRDM4-206ENST00000550659 USP11P51784 963 aa7.49□□□□□ -1.21
PRDM4-206ENST00000550659 GFRA1P56159 465 aa7.49□□□□□ -1.21
PRDM4-206ENST00000550659 EVA1CP58658 441 aa7.49□□□□□ -1.21
PRDM4-206ENST00000550659 SNRPNP63162 240 aaKnown RBP7.49□□□□□ -1.21
PRDM4-206ENST00000550659 BRDTQ58F21 947 aaPredicted RBP7.49□□□□□ -1.21
PRDM4-206ENST00000550659 HSP90AB2PQ58FF8 381 aa7.49□□□□□ -1.21
PRDM4-206ENST00000550659 GTF2IRD2BQ6EKJ0 949 aa7.49□□□□□ -1.21
PRDM4-206ENST00000550659 CNNM4Q6P4Q7 775 aa7.49□□□□□ -1.21
PRDM4-206ENST00000550659 GTF2IRD2Q86UP8 949 aa7.49□□□□□ -1.21
PRDM4-206ENST00000550659 AHI1Q8N157 1196 aa7.49□□□□□ -1.21
PRDM4-206ENST00000550659 RIN3Q8TB24 985 aa7.49□□□□□ -1.21
PRDM4-206ENST00000550659 JDP2Q8WYK2 163 aa7.49□□□□□ -1.21
PRDM4-206ENST00000550659 KCTD13Q8WZ19 329 aa7.49□□□□□ -1.21
PRDM4-206ENST00000550659 EZH1Q92800 747 aaPredicted RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms