RNA–Protein interactions for RNA: ENST00000550069.1

PFDN5-209, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-209ENST00000550069 TMEM265A0A087WTH1 108 aa7.09□□□□□ -1.27
PFDN5-209ENST00000550069 TCF3P15923 654 aa7.09□□□□□ -1.27
PFDN5-209ENST00000550069 IL13P35225 146 aa7.09□□□□□ -1.27
PFDN5-209ENST00000550069 ZNF165P49910 485 aa7.09□□□□□ -1.27
PFDN5-209ENST00000550069 EIF4A2Q14240 407 aaKnown RBP7.09□□□□□ -1.27
PFDN5-209ENST00000550069 NBPF6Q5VWK0 638 aa7.09□□□□□ -1.27
PFDN5-209ENST00000550069 TP53INP2Q8IXH6 220 aa7.09□□□□□ -1.27
PFDN5-209ENST00000550069 IFNL2Q8IZJ0 200 aa7.09□□□□□ -1.27
PFDN5-209ENST00000550069 NGEFQ8N5V2 710 aa7.09□□□□□ -1.27
PFDN5-209ENST00000550069 TMEM40Q8WWA1 233 aa7.09□□□□□ -1.27
PFDN5-209ENST00000550069 SMARCC1Q92922 1105 aaPredicted RBP7.09□□□□□ -1.27
PFDN5-209ENST00000550069 VWCEQ96DN2 955 aa7.09□□□□□ -1.27
PFDN5-209ENST00000550069 CCDC74BQ96LY2 380 aa7.09□□□□□ -1.27
PFDN5-209ENST00000550069 NBPF4Q96M43 638 aa7.09□□□□□ -1.27
PFDN5-209ENST00000550069 SLC9A7Q96T83 725 aa7.09□□□□□ -1.27
PFDN5-209ENST00000550069 ZNRF3Q9ULT6 936 aa7.09□□□□□ -1.27
PFDN5-209ENST00000550069 EFR3BQ9Y2G0 817 aa7.09□□□□□ -1.27
PFDN5-209ENST00000550069 SHANK3Q9BYB0 1731 aa7.09□□□□□ -1.27
PFDN5-209ENST00000550069 QSER1Q2KHR3 1735 aa7.08□□□□□ -1.28
PFDN5-209ENST00000550069 SHISA3A0PJX4 238 aa7.08□□□□□ -1.28
PFDN5-209ENST00000550069 MEIS3P2A8K0S8 358 aa7.08□□□□□ -1.28
PFDN5-209ENST00000550069 FAM155AB1AL88 458 aaPredicted RBP7.08□□□□□ -1.28
PFDN5-209ENST00000550069 ERVV-2B6SEH9 535 aa7.08□□□□□ -1.28
PFDN5-209ENST00000550069 RGS13O14921 159 aa7.08□□□□□ -1.28
PFDN5-209ENST00000550069 PPM1GO15355 546 aaPredicted RBP7.08□□□□□ -1.28
PFDN5-209ENST00000550069 HTATSF1O43719 755 aaKnown RBP7.08□□□□□ -1.28
PFDN5-209ENST00000550069 NME1P15531 152 aaKnown RBP7.08□□□□□ -1.28
PFDN5-209ENST00000550069 RAG1P15918 1043 aa7.08□□□□□ -1.28
PFDN5-209ENST00000550069 ZYXQ15942 572 aaKnown RBP7.08□□□□□ -1.28
PFDN5-209ENST00000550069 CDCP2Q5VXM1 449 aa7.08□□□□□ -1.28
PFDN5-209ENST00000550069 NLRC3Q7RTR2 1065 aa7.08□□□□□ -1.28
PFDN5-209ENST00000550069 TMEM192Q8IY95 271 aa7.08□□□□□ -1.28
PFDN5-209ENST00000550069 DTWD2Q8NBA8 298 aa7.08□□□□□ -1.28
PFDN5-209ENST00000550069 GPRASP2Q96D09 838 aa7.08□□□□□ -1.28
PFDN5-209ENST00000550069 IGSF5Q9NSI5 407 aa7.08□□□□□ -1.28
PFDN5-209ENST00000550069 USP35Q9P2H5 1018 aa7.08□□□□□ -1.28
PFDN5-209ENST00000550069 ADGRE2Q9UHX3 823 aa7.08□□□□□ -1.28
PFDN5-209ENST00000550069 VAV3Q9UKW4 847 aa7.08□□□□□ -1.28
PFDN5-209ENST00000550069 ITGB4P16144 1822 aa7.08□□□□□ -1.28
PFDN5-209ENST00000550069 VIRMAQ69YN4 1812 aaKnown RBP7.08□□□□□ -1.28
PFDN5-209ENST00000550069 SCN11AQ9UI33 1791 aa7.08□□□□□ -1.28
PFDN5-209ENST00000550069 RREB1Q92766 1687 aa7.07□□□□□ -1.28
PFDN5-209ENST00000550069 ADAMTS7Q9UKP4 1686 aa7.07□□□□□ -1.28
PFDN5-209ENST00000550069 COL3A1P02461 1466 aaPredicted RBP7.07□□□□□ -1.28
PFDN5-209ENST00000550069 PPP2R1AP30153 589 aa7.07□□□□□ -1.28
PFDN5-209ENST00000550069 ETV3P41162 512 aa7.07□□□□□ -1.28
PFDN5-209ENST00000550069 GJA8P48165 433 aa7.07□□□□□ -1.28
PFDN5-209ENST00000550069 SNW1Q13573 536 aaKnown RBP7.07□□□□□ -1.28
PFDN5-209ENST00000550069 CC2D1BQ5T0F9 858 aaKnown RBP7.07□□□□□ -1.28
PFDN5-209ENST00000550069 TGIF2Q9GZN2 237 aa7.07□□□□□ -1.28
PFDN5-209ENST00000550069 MBNL3Q9NUK0 354 aaKnown RBP7.07□□□□□ -1.28
PFDN5-209ENST00000550069 CICQ96RK0 1608 aaPredicted RBP7.07□□□□□ -1.28
PFDN5-209ENST00000550069 LY75O60449 1722 aa7.07□□□□□ -1.28
PFDN5-209ENST00000550069 FUT4P22083 530 aa7.06□□□□□ -1.28
PFDN5-209ENST00000550069 CLCN7P51798 805 aa7.06□□□□□ -1.28
PFDN5-209ENST00000550069 IKZF1Q13422 519 aa7.06□□□□□ -1.28
PFDN5-209ENST00000550069 C1orf141Q5JVX7 400 aa7.06□□□□□ -1.28
PFDN5-209ENST00000550069 FBXW10Q5XX13 1052 aa7.06□□□□□ -1.28
PFDN5-209ENST00000550069 ZNF746Q6NUN9 644 aaPredicted RBP7.06□□□□□ -1.28
PFDN5-209ENST00000550069 LSRQ86X29 649 aaPredicted RBP7.06□□□□□ -1.28
PFDN5-209ENST00000550069 MARCH10Q8NA82 808 aaPredicted RBP7.06□□□□□ -1.28
PFDN5-209ENST00000550069 RNF141Q8WVD5 230 aa7.06□□□□□ -1.28
PFDN5-209ENST00000550069 UBE2FQ969M7 185 aa7.06□□□□□ -1.28
PFDN5-209ENST00000550069 DUSP15Q9H1R2 295 aaPredicted RBP7.06□□□□□ -1.28
PFDN5-209ENST00000550069 ZSWIM5Q9P217 1185 aa7.06□□□□□ -1.28
PFDN5-209ENST00000550069 SNX11Q9Y5W9 270 aa7.06□□□□□ -1.28
PFDN5-209ENST00000550069 MEGF6O75095 1541 aa7.06□□□□□ -1.28
PFDN5-209ENST00000550069 BTAF1O14981 1849 aa7.06□□□□□ -1.28
PFDN5-209ENST00000550069 RNASE1P07998 156 aaKnown RBP7.05□□□□□ -1.28
PFDN5-209ENST00000550069 ERCC5P28715 1186 aaPredicted RBP7.05□□□□□ -1.28
PFDN5-209ENST00000550069 GBP1P32455 592 aa7.05□□□□□ -1.28
PFDN5-209ENST00000550069 SOX9P48436 509 aa7.05□□□□□ -1.28
PFDN5-209ENST00000550069 NASPP49321 788 aaPredicted RBP7.05□□□□□ -1.28
PFDN5-209ENST00000550069 LMOD3Q0VAK6 560 aa7.05□□□□□ -1.28
PFDN5-209ENST00000550069 DDX10Q13206 875 aaKnown RBP7.05□□□□□ -1.28
PFDN5-209ENST00000550069 PLCL1Q15111 1095 aa7.05□□□□□ -1.28
PFDN5-209ENST00000550069 ZNF792Q3KQV3 632 aa7.05□□□□□ -1.28
PFDN5-209ENST00000550069 RASGRP4Q8TDF6 673 aa7.05□□□□□ -1.28
PFDN5-209ENST00000550069 MISP3Q96FF7 219 aa7.05□□□□□ -1.28
PFDN5-209ENST00000550069 LTV1Q96GA3 475 aaPredicted RBP7.05□□□□□ -1.28
PFDN5-209ENST00000550069 FBXL18Q96ME1 805 aa7.05□□□□□ -1.28
PFDN5-209ENST00000550069 YTHDC1Q96MU7 727 aaKnown RBP7.05□□□□□ -1.28
PFDN5-209ENST00000550069 FERD3LQ96RJ6 166 aa7.05□□□□□ -1.28
PFDN5-209ENST00000550069 CHMP4AQ9BY43 222 aa7.05□□□□□ -1.28
PFDN5-209ENST00000550069 CCSER2Q9H7U1 834 aa7.05□□□□□ -1.28
PFDN5-209ENST00000550069 PRKRIP1Q9H875 184 aaPredicted RBP7.05□□□□□ -1.28
PFDN5-209ENST00000550069 BABAM1Q9NWV8 329 aa7.05□□□□□ -1.28
PFDN5-209ENST00000550069 MINPP1Q9UNW1 487 aa7.05□□□□□ -1.28
PFDN5-209ENST00000550069 DOT1LQ8TEK3 1739 aa7.04□□□□□ -1.28
PFDN5-209ENST00000550069 TNFRSF10CO14798 259 aa7.04□□□□□ -1.28
PFDN5-209ENST00000550069 ANP32CO43423 234 aa7.04□□□□□ -1.28
PFDN5-209ENST00000550069 PHKG2P15735 406 aa7.04□□□□□ -1.28
PFDN5-209ENST00000550069 DEKP35659 375 aaKnown RBP7.04□□□□□ -1.28
PFDN5-209ENST00000550069 KIR3DL1P43629 444 aa7.04□□□□□ -1.28
PFDN5-209ENST00000550069 TNNT2P45379 298 aaPredicted RBP7.04□□□□□ -1.28
PFDN5-209ENST00000550069 SULT6B1Q6IMI4 303 aa7.04□□□□□ -1.28
PFDN5-209ENST00000550069 CBLL1Q75N03 491 aa7.04□□□□□ -1.28
PFDN5-209ENST00000550069 STK11IPQ8N1F8 1099 aa7.04□□□□□ -1.28
PFDN5-209ENST00000550069 FLAD1Q8NFF5 587 aa7.04□□□□□ -1.28
PFDN5-209ENST00000550069 SLC6A18Q96N87 628 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms