RNA–Protein interactions for RNA: ENST00000549915.5

RAB5B-207, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 494 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-207ENST00000549915 FBF1Q8TES7 1133 aa4.33□□□□□ -1.72
RAB5B-207ENST00000549915 PPM1EQ8WY54 764 aa4.33□□□□□ -1.72
RAB5B-207ENST00000549915 KLHDC7BQ96G42 594 aa4.33□□□□□ -1.72
RAB5B-207ENST00000549915 FAM46AQ96IP4 442 aaKnown RBP4.33□□□□□ -1.72
RAB5B-207ENST00000549915 MYRFLQ96LU7 910 aa4.33□□□□□ -1.72
RAB5B-207ENST00000549915 NEK1Q96PY6 1258 aa4.33□□□□□ -1.72
RAB5B-207ENST00000549915 SLC26A8Q96RN1 970 aa4.33□□□□□ -1.72
RAB5B-207ENST00000549915 CSRNP1Q96S65 589 aa4.33□□□□□ -1.72
RAB5B-207ENST00000549915 KRTAP4-6Q9BYQ5 205 aa4.33□□□□□ -1.72
RAB5B-207ENST00000549915 AGXT2Q9BYV1 514 aa4.33□□□□□ -1.72
RAB5B-207ENST00000549915 XPO4Q9C0E2 1151 aaKnown RBP4.33□□□□□ -1.72
RAB5B-207ENST00000549915 TMX1Q9H3N1 280 aa4.33□□□□□ -1.72
RAB5B-207ENST00000549915 MED4Q9NPJ6 270 aa4.33□□□□□ -1.72
RAB5B-207ENST00000549915 ST7Q9NRC1 585 aa4.33□□□□□ -1.72
RAB5B-207ENST00000549915 ATG3Q9NT62 314 aa4.33□□□□□ -1.72
RAB5B-207ENST00000549915 RTEL1Q9NZ71 1219 aa4.33□□□□□ -1.72
RAB5B-207ENST00000549915 IFNKQ9P0W0 207 aa4.33□□□□□ -1.72
RAB5B-207ENST00000549915 STOML1Q9UBI4 398 aa4.33□□□□□ -1.72
RAB5B-207ENST00000549915 RSPH14Q9UHP6 348 aa4.33□□□□□ -1.72
RAB5B-207ENST00000549915 RNF112Q9ULX5 631 aa4.33□□□□□ -1.72
RAB5B-207ENST00000549915 RRP15Q9Y3B9 282 aaKnown RBP4.33□□□□□ -1.72
RAB5B-207ENST00000549915 MRFAP1Q9Y605 127 aa4.33□□□□□ -1.72
RAB5B-207ENST00000549915 LMO7Q8WWI1 1683 aa4.32□□□□□ -1.72
RAB5B-207ENST00000549915 SH3TC1Q8TE82 1336 aa4.32□□□□□ -1.72
RAB5B-207ENST00000549915 SYNGAP1Q96PV0 1343 aa4.32□□□□□ -1.72
RAB5B-207ENST00000549915 PRR36Q9H6K5 1346 aa4.32□□□□□ -1.72
RAB5B-207ENST00000549915 FAM237AA0A1B0GTK4 181 aa4.32□□□□□ -1.72
RAB5B-207ENST00000549915 EIF1AYO14602 144 aaKnown RBP4.32□□□□□ -1.72
RAB5B-207ENST00000549915 GIPC1O14908 333 aa4.32□□□□□ -1.72
RAB5B-207ENST00000549915 POLR3GO15318 223 aaPredicted RBP4.32□□□□□ -1.72
RAB5B-207ENST00000549915 DHX16O60231 1041 aaKnown RBP4.32□□□□□ -1.72
RAB5B-207ENST00000549915 STX10O60499 249 aa4.32□□□□□ -1.72
RAB5B-207ENST00000549915 TAF5LO75529 589 aa4.32□□□□□ -1.72
RAB5B-207ENST00000549915 URI1O94763 535 aaPredicted RBP4.32□□□□□ -1.72
RAB5B-207ENST00000549915 MAP4K4O95819 1239 aaPredicted RBP4.32□□□□□ -1.72
RAB5B-207ENST00000549915 SLC3A2P08195 630 aaKnown RBP4.32□□□□□ -1.72
RAB5B-207ENST00000549915 ACPPP15309 386 aa4.32□□□□□ -1.72
RAB5B-207ENST00000549915 FSTP19883 344 aa4.32□□□□□ -1.72
RAB5B-207ENST00000549915 FBLN1P23142 703 aa4.32□□□□□ -1.72
RAB5B-207ENST00000549915 ITPKAP23677 461 aa4.32□□□□□ -1.72
RAB5B-207ENST00000549915 GUCY2CP25092 1073 aa4.32□□□□□ -1.72
RAB5B-207ENST00000549915 MCM3P25205 808 aa4.32□□□□□ -1.72
RAB5B-207ENST00000549915 MAPK1P28482 360 aa4.32□□□□□ -1.72
RAB5B-207ENST00000549915 GRIK1P39086 918 aa4.32□□□□□ -1.72
RAB5B-207ENST00000549915 USP8P40818 1118 aa4.32□□□□□ -1.72
RAB5B-207ENST00000549915 ME1P48163 572 aa4.32□□□□□ -1.72
RAB5B-207ENST00000549915 GTF2A1P52655 376 aaPredicted RBP4.32□□□□□ -1.72
RAB5B-207ENST00000549915 FANCCQ00597 558 aa4.32□□□□□ -1.72
RAB5B-207ENST00000549915 ATP2B2Q01814 1243 aa4.32□□□□□ -1.72
RAB5B-207ENST00000549915 MYL5Q02045 173 aa4.32□□□□□ -1.72
RAB5B-207ENST00000549915 PCDH1Q08174 1060 aa4.32□□□□□ -1.72
RAB5B-207ENST00000549915 LRP8Q14114 963 aa4.32□□□□□ -1.72
RAB5B-207ENST00000549915 ECM1Q16610 540 aa4.32□□□□□ -1.72
RAB5B-207ENST00000549915 CT47A1Q5JQC4 288 aaPredicted RBP4.32□□□□□ -1.72
RAB5B-207ENST00000549915 AXDND1Q5T1B0 1012 aaPredicted RBP4.32□□□□□ -1.72
RAB5B-207ENST00000549915 FAM173BQ6P4H8 233 aa4.32□□□□□ -1.72
RAB5B-207ENST00000549915 HDXQ7Z353 690 aa4.32□□□□□ -1.72
RAB5B-207ENST00000549915 RPAINQ86UA6 219 aa4.32□□□□□ -1.72
RAB5B-207ENST00000549915 AACSQ86V21 672 aa4.32□□□□□ -1.72
RAB5B-207ENST00000549915 CLEC10AQ8IUN9 316 aa4.32□□□□□ -1.72
RAB5B-207ENST00000549915 VSTM4Q8IW00 320 aa4.32□□□□□ -1.72
RAB5B-207ENST00000549915 REXO1L1PQ8IX06 675 aa4.32□□□□□ -1.72
RAB5B-207ENST00000549915 EFCAB13Q8IY85 973 aa4.32□□□□□ -1.72
RAB5B-207ENST00000549915 JMYQ8N9B5 988 aa4.32□□□□□ -1.72
RAB5B-207ENST00000549915 MSANTD4Q8NCY6 345 aa4.32□□□□□ -1.72
RAB5B-207ENST00000549915 SMG8Q8ND04 991 aaKnown RBP4.32□□□□□ -1.72
RAB5B-207ENST00000549915 NSUN7Q8NE18 718 aaKnown RBP4.32□□□□□ -1.72
RAB5B-207ENST00000549915 CTCFLQ8NI51 663 aaPredicted RBP4.32□□□□□ -1.72
RAB5B-207ENST00000549915 FAM71BQ8TC56 605 aa4.32□□□□□ -1.72
RAB5B-207ENST00000549915 ANKRD24Q8TF21 1146 aa4.32□□□□□ -1.72
RAB5B-207ENST00000549915 ERCC4Q92889 916 aaPredicted RBP4.32□□□□□ -1.72
RAB5B-207ENST00000549915 SMARCE1Q969G3 411 aa4.32□□□□□ -1.72
RAB5B-207ENST00000549915 ZNF274Q96GC6 653 aaPredicted RBP4.32□□□□□ -1.72
RAB5B-207ENST00000549915 USP28Q96RU2 1077 aa4.32□□□□□ -1.72
RAB5B-207ENST00000549915 MYCBPQ99417 103 aaPredicted RBP4.32□□□□□ -1.72
RAB5B-207ENST00000549915 NCAPGQ9BPX3 1015 aa4.32□□□□□ -1.72
RAB5B-207ENST00000549915 SDF4Q9BRK5 362 aa4.32□□□□□ -1.72
RAB5B-207ENST00000549915 TACO1Q9BSH4 297 aaKnown RBP4.32□□□□□ -1.72
RAB5B-207ENST00000549915 FSD1Q9BTV5 496 aa4.32□□□□□ -1.72
RAB5B-207ENST00000549915 CARD6Q9BX69 1037 aa4.32□□□□□ -1.72
RAB5B-207ENST00000549915 FUT8Q9BYC5 575 aa4.32□□□□□ -1.72
RAB5B-207ENST00000549915 GOLPH3LQ9H4A5 285 aa4.32□□□□□ -1.72
RAB5B-207ENST00000549915 VIPAS39Q9H9C1 493 aa4.32□□□□□ -1.72
RAB5B-207ENST00000549915 TUBE1Q9UJT0 475 aa4.32□□□□□ -1.72
RAB5B-207ENST00000549915 RAB21Q9UL25 225 aa4.32□□□□□ -1.72
RAB5B-207ENST00000549915 SPEF2Q9C093 1822 aa4.32□□□□□ -1.72
RAB5B-207ENST00000549915 PHRF1Q9P1Y6 1649 aaKnown RBP4.32□□□□□ -1.72
RAB5B-207ENST00000549915 DIP2BQ9P265 1576 aa4.31□□□□□ -1.72
RAB5B-207ENST00000549915 KDM6AO15550 1401 aaPredicted RBP4.31□□□□□ -1.72
RAB5B-207ENST00000549915 METP08581 1390 aa4.31□□□□□ -1.72
RAB5B-207ENST00000549915 CARMIL3Q8ND23 1372 aa4.31□□□□□ -1.72
RAB5B-207ENST00000549915 PALLDQ8WX93 1383 aa4.31□□□□□ -1.72
RAB5B-207ENST00000549915 NEDD4P46934 1319 aa4.31□□□□□ -1.72
RAB5B-207ENST00000549915 ATXN2Q99700 1313 aaKnown RBP4.31□□□□□ -1.72
RAB5B-207ENST00000549915 A0A0D9SFI3 127 aa4.31□□□□□ -1.72
RAB5B-207ENST00000549915 PTPDC1A2A3K4 754 aa4.31□□□□□ -1.72
RAB5B-207ENST00000549915 VWA3AA6NCI4 1184 aa4.31□□□□□ -1.72
RAB5B-207ENST00000549915 SOX1O00570 391 aaPredicted RBP4.31□□□□□ -1.72
RAB5B-207ENST00000549915 TM4SF5O14894 197 aa4.31□□□□□ -1.72
RAB5B-207ENST00000549915 JAK2O60674 1132 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms