RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 APOA5Q6Q788 366 aa11.34□□□□□ -0.59
HDAC7-229ENST00000549883 SEPT14Q6ZU15 432 aa11.34□□□□□ -0.59
HDAC7-229ENST00000549883 FCHSD1Q86WN1 690 aa11.34□□□□□ -0.59
HDAC7-229ENST00000549883 MCF2L2Q86YR7 1114 aa11.34□□□□□ -0.59
HDAC7-229ENST00000549883 FANCBQ8NB91 859 aa11.34□□□□□ -0.59
HDAC7-229ENST00000549883 DNERQ8NFT8 737 aa11.34□□□□□ -0.59
HDAC7-229ENST00000549883 MAP3K14Q99558 947 aa11.34□□□□□ -0.59
HDAC7-229ENST00000549883 TSEN34Q9BSV6 310 aaKnown RBP11.34□□□□□ -0.59
HDAC7-229ENST00000549883 SPZ1Q9BXG8 430 aa11.34□□□□□ -0.59
HDAC7-229ENST00000549883 STARD7Q9NQZ5 370 aa11.34□□□□□ -0.59
HDAC7-229ENST00000549883 PDLIM7Q9NR12 457 aa11.34□□□□□ -0.59
HDAC7-229ENST00000549883 PXMP2Q9NR77 195 aa11.34□□□□□ -0.59
HDAC7-229ENST00000549883 FAM217BQ9NTX9 383 aaPredicted RBP11.34□□□□□ -0.59
HDAC7-229ENST00000549883 SLC12A7Q9Y666 1083 aa11.34□□□□□ -0.59
HDAC7-229ENST00000549883 GRIN2DO15399 1336 aa11.34□□□□□ -0.59
HDAC7-229ENST00000549883 SOX1O00570 391 aaPredicted RBP11.33□□□□□ -0.6
HDAC7-229ENST00000549883 RGS20O76081 388 aa11.33□□□□□ -0.6
HDAC7-229ENST00000549883 CDC27P30260 824 aa11.33□□□□□ -0.6
HDAC7-229ENST00000549883 PSMC6P62333 389 aa11.33□□□□□ -0.6
HDAC7-229ENST00000549883 APOBRQ0VD83 1088 aa11.33□□□□□ -0.6
HDAC7-229ENST00000549883 FUT2Q10981 343 aa11.33□□□□□ -0.6
HDAC7-229ENST00000549883 ARHGEF16Q5VV41 709 aa11.33□□□□□ -0.6
HDAC7-229ENST00000549883 ERICH6BQ5W0A0 696 aa11.33□□□□□ -0.6
HDAC7-229ENST00000549883 CCDC62Q6P9F0 684 aa11.33□□□□□ -0.6
HDAC7-229ENST00000549883 Q6ZUG5 572 aa11.33□□□□□ -0.6
HDAC7-229ENST00000549883 TMTC3Q6ZXV5 915 aa11.33□□□□□ -0.6
HDAC7-229ENST00000549883 TMTC2Q8N394 836 aa11.33□□□□□ -0.6
HDAC7-229ENST00000549883 NSUN6Q8TEA1 469 aaKnown RBP11.33□□□□□ -0.6
HDAC7-229ENST00000549883 RRP36Q96EU6 259 aaKnown RBP11.33□□□□□ -0.6
HDAC7-229ENST00000549883 USP26Q9BXU7 913 aa11.33□□□□□ -0.6
HDAC7-229ENST00000549883 AP5M1Q9H0R1 490 aa11.33□□□□□ -0.6
HDAC7-229ENST00000549883 PRDM5Q9NQX1 630 aaPredicted RBP11.33□□□□□ -0.6
HDAC7-229ENST00000549883 SCN10AQ9Y5Y9 1956 aa11.32□□□□□ -0.6
HDAC7-229ENST00000549883 LOC102724159A0A0B4J2E5 919 aa11.32□□□□□ -0.6
HDAC7-229ENST00000549883 KLF18A0A0U1RQI7 1052 aa11.32□□□□□ -0.6
HDAC7-229ENST00000549883 MOXD2PA6NHM9 499 aa11.32□□□□□ -0.6
HDAC7-229ENST00000549883 SORBS3O60504 671 aa11.32□□□□□ -0.6
HDAC7-229ENST00000549883 NR3C2P08235 984 aa11.32□□□□□ -0.6
HDAC7-229ENST00000549883 TXNP10599 105 aaKnown RBP11.32□□□□□ -0.6
HDAC7-229ENST00000549883 MYCLP12524 364 aaPredicted RBP11.32□□□□□ -0.6
HDAC7-229ENST00000549883 KIF5BP33176 963 aa11.32□□□□□ -0.6
HDAC7-229ENST00000549883 CDK7P50613 346 aa11.32□□□□□ -0.6
HDAC7-229ENST00000549883 FAAP100Q0VG06 881 aa11.32□□□□□ -0.6
HDAC7-229ENST00000549883 KRT32Q14532 448 aa11.32□□□□□ -0.6
HDAC7-229ENST00000549883 PWP2Q15269 919 aaKnown RBP11.32□□□□□ -0.6
HDAC7-229ENST00000549883 LY6KQ17RY6 165 aa11.32□□□□□ -0.6
HDAC7-229ENST00000549883 C1orf53Q5VUE5 145 aa11.32□□□□□ -0.6
HDAC7-229ENST00000549883 USP17L6PQ6QN14 398 aa11.32□□□□□ -0.6
HDAC7-229ENST00000549883 PCSK9Q8NBP7 692 aaKnown RBP11.32□□□□□ -0.6
HDAC7-229ENST00000549883 GPKOWQ92917 476 aaPredicted RBP eCLIP11.32□□□□□ -0.6
HDAC7-229ENST00000549883 VTI1AQ96AJ9 217 aa11.32□□□□□ -0.6
HDAC7-229ENST00000549883 PDCD2LQ9BRP1 358 aa11.32□□□□□ -0.6
HDAC7-229ENST00000549883 LARP6Q9BRS8 491 aaKnown RBP11.32□□□□□ -0.6
HDAC7-229ENST00000549883 BCAS3Q9H6U6 928 aa11.32□□□□□ -0.6
HDAC7-229ENST00000549883 CNTNAP5Q8WYK1 1306 aa11.32□□□□□ -0.6
HDAC7-229ENST00000549883 GCOM1H8Y6P7 765 aaPredicted RBP11.31□□□□□ -0.6
HDAC7-229ENST00000549883 ADAMTS3O15072 1205 aa11.31□□□□□ -0.6
HDAC7-229ENST00000549883 PPFIA3O75145 1194 aa11.31□□□□□ -0.6
HDAC7-229ENST00000549883 REC8O95072 547 aa11.31□□□□□ -0.6
HDAC7-229ENST00000549883 POLR2MP0CAP2 368 aa11.31□□□□□ -0.6
HDAC7-229ENST00000549883 CALM1P0DP23 149 aa11.31□□□□□ -0.6
HDAC7-229ENST00000549883 CALM2P0DP24 149 aa11.31□□□□□ -0.6
HDAC7-229ENST00000549883 CALM3P0DP25 149 aa11.31□□□□□ -0.6
HDAC7-229ENST00000549883 RPS6KB1P23443 525 aa11.31□□□□□ -0.6
HDAC7-229ENST00000549883 SMARCA1P28370 1054 aa11.31□□□□□ -0.6
HDAC7-229ENST00000549883 PGM5Q15124 567 aa11.31□□□□□ -0.6
HDAC7-229ENST00000549883 PPP2R5BQ15173 497 aa11.31□□□□□ -0.6
HDAC7-229ENST00000549883 STXBP2Q15833 593 aa11.31□□□□□ -0.6
HDAC7-229ENST00000549883 TYW1BQ6NUM6 668 aa11.31□□□□□ -0.6
HDAC7-229ENST00000549883 BLOC1S2Q6QNY1 142 aa11.31□□□□□ -0.6
HDAC7-229ENST00000549883 OR6J1Q8NGC5 347 aa11.31□□□□□ -0.6
HDAC7-229ENST00000549883 SCFD2Q8WU76 684 aa11.31□□□□□ -0.6
HDAC7-229ENST00000549883 BADQ92934 168 aa11.31□□□□□ -0.6
HDAC7-229ENST00000549883 BRF1Q92994 677 aa11.31□□□□□ -0.6
HDAC7-229ENST00000549883 GLT1D1Q96MS3 346 aa11.31□□□□□ -0.6
HDAC7-229ENST00000549883 LZTS2Q9BRK4 669 aa11.31□□□□□ -0.6
HDAC7-229ENST00000549883 UBE2OQ9C0C9 1292 aaKnown RBP11.31□□□□□ -0.6
HDAC7-229ENST00000549883 SPC25Q9HBM1 224 aa11.31□□□□□ -0.6
HDAC7-229ENST00000549883 NAP1L2Q9ULW6 460 aaPredicted RBP11.31□□□□□ -0.6
HDAC7-229ENST00000549883 Q9Y3F1 56 aa11.31□□□□□ -0.6
HDAC7-229ENST00000549883 ELP1O95163 1332 aa11.31□□□□□ -0.6
HDAC7-229ENST00000549883 A0A0U1RQG5 324 aaPredicted RBP11.3□□□□□ -0.6
HDAC7-229ENST00000549883 GOLGA8AA7E2F4 631 aa11.3□□□□□ -0.6
HDAC7-229ENST00000549883 GOLGA8BA8MQT2 603 aa11.3□□□□□ -0.6
HDAC7-229ENST00000549883 ARVCFO00192 962 aa11.3□□□□□ -0.6
HDAC7-229ENST00000549883 MEIS2O14770 477 aa11.3□□□□□ -0.6
HDAC7-229ENST00000549883 ZBTB43O43298 467 aa11.3□□□□□ -0.6
HDAC7-229ENST00000549883 MYL3P08590 195 aa11.3□□□□□ -0.6
HDAC7-229ENST00000549883 CLTBP09497 229 aa11.3□□□□□ -0.6
HDAC7-229ENST00000549883 CASTP20810 708 aaKnown RBP11.3□□□□□ -0.6
HDAC7-229ENST00000549883 BMP8BP34820 402 aa11.3□□□□□ -0.6
HDAC7-229ENST00000549883 ADD1P35611 737 aaKnown RBP11.3□□□□□ -0.6
HDAC7-229ENST00000549883 GNAQP50148 359 aa11.3□□□□□ -0.6
HDAC7-229ENST00000549883 EPHB4P54760 987 aa11.3□□□□□ -0.6
HDAC7-229ENST00000549883 MRPS9P82933 396 aaKnown RBP11.3□□□□□ -0.6
HDAC7-229ENST00000549883 SP2Q02086 613 aa11.3□□□□□ -0.6
HDAC7-229ENST00000549883 ARHGAP1Q07960 439 aa11.3□□□□□ -0.6
HDAC7-229ENST00000549883 ITGA7Q13683 1181 aa11.3□□□□□ -0.6
HDAC7-229ENST00000549883 UBE2SQ16763 222 aa11.3□□□□□ -0.6
HDAC7-229ENST00000549883 RTN1Q16799 776 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms