RNA–Protein interactions for RNA: ENST00000549752.1

CCDC38-207, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 476 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-207ENST00000549752 CCSAPQ6IQ19 270 aaPredicted RBP12.14□□□□□ -0.47
CCDC38-207ENST00000549752 CATIPQ7Z7H3 387 aa12.14□□□□□ -0.47
CCDC38-207ENST00000549752 TMTC2Q8N394 836 aa12.14□□□□□ -0.47
CCDC38-207ENST00000549752 SAMD3Q8N6K7 520 aa12.14□□□□□ -0.47
CCDC38-207ENST00000549752 AMNQ9BXJ7 453 aa12.14□□□□□ -0.47
CCDC38-207ENST00000549752 MAP3K20Q9NYL2 800 aaKnown RBP12.14□□□□□ -0.47
CCDC38-207ENST00000549752 GNEQ9Y223 722 aaKnown RBP12.14□□□□□ -0.47
CCDC38-207ENST00000549752 RBM8AQ9Y5S9 174 aaKnown RBP12.14□□□□□ -0.47
CCDC38-207ENST00000549752 SCN10AQ9Y5Y9 1956 aa12.14□□□□□ -0.47
CCDC38-207ENST00000549752 SZT2Q5T011 3432 aa12.14□□□□□ -0.47
CCDC38-207ENST00000549752 TRIP12Q14669 1992 aaPredicted RBP12.13□□□□□ -0.47
CCDC38-207ENST00000549752 C19orf67A6NJJ6 358 aa12.13□□□□□ -0.47
CCDC38-207ENST00000549752 TTLL13PA6NNM8 815 aa12.13□□□□□ -0.47
CCDC38-207ENST00000549752 KIAA0355O15063 1070 aa12.13□□□□□ -0.47
CCDC38-207ENST00000549752 RAG1P15918 1043 aa12.13□□□□□ -0.47
CCDC38-207ENST00000549752 CPT1AP50416 773 aa12.13□□□□□ -0.47
CCDC38-207ENST00000549752 QRICH1Q2TAL8 776 aa12.13□□□□□ -0.47
CCDC38-207ENST00000549752 DUSP28Q4G0W2 176 aa12.13□□□□□ -0.47
CCDC38-207ENST00000549752 TMEM67Q5HYA8 995 aa12.13□□□□□ -0.47
CCDC38-207ENST00000549752 RNF20Q5VTR2 975 aa12.13□□□□□ -0.47
CCDC38-207ENST00000549752 TAPT1Q6NXT6 567 aa12.13□□□□□ -0.47
CCDC38-207ENST00000549752 SLC30A10Q6XR72 485 aa12.13□□□□□ -0.47
CCDC38-207ENST00000549752 CYB5R4Q7L1T6 521 aa12.13□□□□□ -0.47
CCDC38-207ENST00000549752 EEPD1Q7L9B9 569 aa12.13□□□□□ -0.47
CCDC38-207ENST00000549752 GPIHBP1Q8IV16 184 aa12.13□□□□□ -0.47
CCDC38-207ENST00000549752 FBXO16Q8IX29 292 aaPredicted RBP12.13□□□□□ -0.47
CCDC38-207ENST00000549752 NSUN6Q8TEA1 469 aaKnown RBP12.13□□□□□ -0.47
CCDC38-207ENST00000549752 SCFD2Q8WU76 684 aa12.13□□□□□ -0.47
CCDC38-207ENST00000549752 IWS1Q96ST2 819 aa12.13□□□□□ -0.47
CCDC38-207ENST00000549752 WDR11Q9BZH6 1224 aa12.13□□□□□ -0.47
CCDC38-207ENST00000549752 VAT1LQ9HCJ6 419 aa12.13□□□□□ -0.47
CCDC38-207ENST00000549752 TMEM39AQ9NV64 488 aa12.13□□□□□ -0.47
CCDC38-207ENST00000549752 LAMA3Q16787 3333 aa12.13□□□□□ -0.47
CCDC38-207ENST00000549752 ASTN1O14525 1302 aa12.12□□□□□ -0.47
CCDC38-207ENST00000549752 RBM47A0AV96 593 aaKnown RBP12.12□□□□□ -0.47
CCDC38-207ENST00000549752 PALM3A6NDB9 673 aaPredicted RBP12.12□□□□□ -0.47
CCDC38-207ENST00000549752 ARVCFO00192 962 aa12.12□□□□□ -0.47
CCDC38-207ENST00000549752 ZBTB5O15062 677 aa12.12□□□□□ -0.47
CCDC38-207ENST00000549752 DYNC1LI2O43237 492 aaPredicted RBP12.12□□□□□ -0.47
CCDC38-207ENST00000549752 ADCY6O43306 1168 aa12.12□□□□□ -0.47
CCDC38-207ENST00000549752 SMPD1P17405 629 aa12.12□□□□□ -0.47
CCDC38-207ENST00000549752 KIF5BP33176 963 aa12.12□□□□□ -0.47
CCDC38-207ENST00000549752 MCM5P33992 734 aa12.12□□□□□ -0.47
CCDC38-207ENST00000549752 GRM4Q14833 912 aa12.12□□□□□ -0.47
CCDC38-207ENST00000549752 PPP2R5BQ15173 497 aa12.12□□□□□ -0.47
CCDC38-207ENST00000549752 TMC2Q8TDI7 906 aa12.12□□□□□ -0.47
CCDC38-207ENST00000549752 MAP3K14Q99558 947 aa12.12□□□□□ -0.47
CCDC38-207ENST00000549752 ESYT1Q9BSJ8 1104 aa12.12□□□□□ -0.47
CCDC38-207ENST00000549752 JMJD4Q9H9V9 463 aa12.12□□□□□ -0.47
CCDC38-207ENST00000549752 POLR3EQ9NVU0 708 aa12.12□□□□□ -0.47
CCDC38-207ENST00000549752 MYO9BQ13459 2157 aa12.11□□□□□ -0.47
CCDC38-207ENST00000549752 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.11□□□□□ -0.47
CCDC38-207ENST00000549752 MYADML2A6NDP7 307 aa12.11□□□□□ -0.47
CCDC38-207ENST00000549752 KPNA6O60684 536 aa12.11□□□□□ -0.47
CCDC38-207ENST00000549752 EDNRBP24530 442 aa12.11□□□□□ -0.47
CCDC38-207ENST00000549752 TTLL4Q14679 1199 aa12.11□□□□□ -0.47
CCDC38-207ENST00000549752 CTCFLQ8NI51 663 aaPredicted RBP12.11□□□□□ -0.47
CCDC38-207ENST00000549752 BADQ92934 168 aa12.11□□□□□ -0.47
CCDC38-207ENST00000549752 TMEM87BQ96K49 555 aa12.11□□□□□ -0.47
CCDC38-207ENST00000549752 PURBQ96QR8 312 aaKnown RBP12.11□□□□□ -0.47
CCDC38-207ENST00000549752 CPVLQ9H3G5 476 aa12.11□□□□□ -0.47
CCDC38-207ENST00000549752 ANO2Q9NQ90 1003 aa12.11□□□□□ -0.47
CCDC38-207ENST00000549752 PDGFCQ9NRA1 345 aa12.11□□□□□ -0.47
CCDC38-207ENST00000549752 MAD2L2Q9UI95 211 aa12.11□□□□□ -0.47
CCDC38-207ENST00000549752 TRIM43BA6NCK2 446 aa12.1□□□□□ -0.47
CCDC38-207ENST00000549752 DDAH1O94760 285 aa12.1□□□□□ -0.47
CCDC38-207ENST00000549752 CALM1P0DP23 149 aa12.1□□□□□ -0.47
CCDC38-207ENST00000549752 CALM2P0DP24 149 aa12.1□□□□□ -0.47
CCDC38-207ENST00000549752 CALM3P0DP25 149 aa12.1□□□□□ -0.47
CCDC38-207ENST00000549752 GNAQP50148 359 aa12.1□□□□□ -0.47
CCDC38-207ENST00000549752 CDK7P50613 346 aa12.1□□□□□ -0.47
CCDC38-207ENST00000549752 BEX3Q00994 111 aa12.1□□□□□ -0.47
CCDC38-207ENST00000549752 FPGSQ05932 587 aa12.1□□□□□ -0.47
CCDC38-207ENST00000549752 FAAP100Q0VG06 881 aa12.1□□□□□ -0.47
CCDC38-207ENST00000549752 STXBP2Q15833 593 aa12.1□□□□□ -0.47
CCDC38-207ENST00000549752 ARHGEF16Q5VV41 709 aa12.1□□□□□ -0.47
CCDC38-207ENST00000549752 MB21D2Q8IYB1 491 aaPredicted RBP12.1□□□□□ -0.47
CCDC38-207ENST00000549752 STAG2Q8N3U4 1231 aa12.1□□□□□ -0.47
CCDC38-207ENST00000549752 OR6J1Q8NGC5 347 aa12.1□□□□□ -0.47
CCDC38-207ENST00000549752 SYTL5Q8TDW5 730 aaPredicted RBP12.1□□□□□ -0.47
CCDC38-207ENST00000549752 TRIM43Q96BQ3 446 aaPredicted RBP12.1□□□□□ -0.47
CCDC38-207ENST00000549752 MTMR8Q96EF0 704 aa12.1□□□□□ -0.47
CCDC38-207ENST00000549752 CCDC136Q96JN2 1154 aa12.1□□□□□ -0.47
CCDC38-207ENST00000549752 RMDN3Q96TC7 470 aa12.1□□□□□ -0.47
CCDC38-207ENST00000549752 LZTS2Q9BRK4 669 aa12.1□□□□□ -0.47
CCDC38-207ENST00000549752 RIOX1Q9H6W3 641 aa12.1□□□□□ -0.47
CCDC38-207ENST00000549752 PCDHA1Q9Y5I3 950 aa12.1□□□□□ -0.47
CCDC38-207ENST00000549752 DOCK5Q9H7D0 1870 aa12.09□□□□□ -0.47
CCDC38-207ENST00000549752 PNMA6FA0A0J9YX94 578 aa12.09□□□□□ -0.47
CCDC38-207ENST00000549752 CCDC69A6NI79 296 aa12.09□□□□□ -0.47
CCDC38-207ENST00000549752 CTAGE5O15320 804 aa12.09□□□□□ -0.47
CCDC38-207ENST00000549752 CFBP00751 764 aa12.09□□□□□ -0.47
CCDC38-207ENST00000549752 TIMP1P01033 207 aa12.09□□□□□ -0.47
CCDC38-207ENST00000549752 NEFLP07196 543 aa12.09□□□□□ -0.47
CCDC38-207ENST00000549752 TXNP10599 105 aaKnown RBP12.09□□□□□ -0.47
CCDC38-207ENST00000549752 SMARCA1P28370 1054 aa12.09□□□□□ -0.47
CCDC38-207ENST00000549752 TROAPQ12815 778 aa12.09□□□□□ -0.47
CCDC38-207ENST00000549752 ITGA7Q13683 1181 aa12.09□□□□□ -0.47
CCDC38-207ENST00000549752 KCNV1Q6PIU1 500 aa12.09□□□□□ -0.47
CCDC38-207ENST00000549752 CXCL17Q6UXB2 119 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms