RNA–Protein interactions for RNA: ENST00000549362.1

USP25-210, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 2

Gene USP25, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-210ENST00000549362 CDH24Q86UP0 819 aa5.31□□□□□ -1.56
USP25-210ENST00000549362 DHX37Q8IY37 1157 aaKnown RBP5.31□□□□□ -1.56
USP25-210ENST00000549362 PANK1Q8TE04 598 aa5.31□□□□□ -1.56
USP25-210ENST00000549362 DHRS4Q9BTZ2 278 aa5.31□□□□□ -1.56
USP25-210ENST00000549362 C22orf23Q9BZE7 217 aa5.31□□□□□ -1.56
USP25-210ENST00000549362 TERF2IPQ9NYB0 399 aa5.31□□□□□ -1.56
USP25-210ENST00000549362 PLAAQ9Y263 795 aa5.31□□□□□ -1.56
USP25-210ENST00000549362 ZC3H13Q5T200 1668 aaKnown RBP5.31□□□□□ -1.56
USP25-210ENST00000549362 PPLO60437 1756 aa5.3□□□□□ -1.56
USP25-210ENST00000549362 TRBV23-1A0A0A0MS06 115 aa5.3□□□□□ -1.56
USP25-210ENST00000549362 KRTAP9-7A8MTY7 169 aa5.3□□□□□ -1.56
USP25-210ENST00000549362 GOLGA6L22H0YM25 854 aa5.3□□□□□ -1.56
USP25-210ENST00000549362 ADCY3O60266 1144 aa5.3□□□□□ -1.56
USP25-210ENST00000549362 ITGAVP06756 1048 aa5.3□□□□□ -1.56
USP25-210ENST00000549362 ITGA4P13612 1032 aa5.3□□□□□ -1.56
USP25-210ENST00000549362 CD247P20963 164 aa5.3□□□□□ -1.56
USP25-210ENST00000549362 PREPP48147 710 aa5.3□□□□□ -1.56
USP25-210ENST00000549362 MTHFSP49914 203 aa5.3□□□□□ -1.56
USP25-210ENST00000549362 PPP2R2AP63151 447 aa5.3□□□□□ -1.56
USP25-210ENST00000549362 AUHQ13825 339 aaKnown RBP5.3□□□□□ -1.56
USP25-210ENST00000549362 MAP7Q14244 749 aa5.3□□□□□ -1.56
USP25-210ENST00000549362 SKOR2Q2VWA4 1001 aaPredicted RBP5.3□□□□□ -1.56
USP25-210ENST00000549362 ALDH1L2Q3SY69 923 aa5.3□□□□□ -1.56
USP25-210ENST00000549362 DALRD3Q5D0E6 543 aaKnown RBP5.3□□□□□ -1.56
USP25-210ENST00000549362 CT47A1Q5JQC4 288 aaPredicted RBP5.3□□□□□ -1.56
USP25-210ENST00000549362 FAM209AQ5JX71 171 aa5.3□□□□□ -1.56
USP25-210ENST00000549362 NBPF12Q5TAG4 269 aaPredicted RBP5.3□□□□□ -1.56
USP25-210ENST00000549362 RNF43Q68DV7 783 aa5.3□□□□□ -1.56
USP25-210ENST00000549362 POMZP3Q6PJE2 187 aa5.3□□□□□ -1.56
USP25-210ENST00000549362 Q6ZS46 218 aa5.3□□□□□ -1.56
USP25-210ENST00000549362 HDGFL2Q7Z4V5 671 aaPredicted RBP5.3□□□□□ -1.56
USP25-210ENST00000549362 NIM1KQ8IY84 436 aa5.3□□□□□ -1.56
USP25-210ENST00000549362 C7orf61Q8IZ16 206 aa5.3□□□□□ -1.56
USP25-210ENST00000549362 CRACR2BQ8N4Y2 399 aaPredicted RBP5.3□□□□□ -1.56
USP25-210ENST00000549362 BVESQ8NE79 360 aa5.3□□□□□ -1.56
USP25-210ENST00000549362 ADCY4Q8NFM4 1077 aa5.3□□□□□ -1.56
USP25-210ENST00000549362 FBLIM1Q8WUP2 373 aa5.3□□□□□ -1.56
USP25-210ENST00000549362 KREMEN1Q96MU8 473 aa5.3□□□□□ -1.56
USP25-210ENST00000549362 GBP4Q96PP9 640 aa5.3□□□□□ -1.56
USP25-210ENST00000549362 KLHL25Q9H0H3 589 aa5.3□□□□□ -1.56
USP25-210ENST00000549362 GSX1Q9H4S2 264 aaPredicted RBP5.3□□□□□ -1.56
USP25-210ENST00000549362 SMC4Q9NTJ3 1288 aa5.3□□□□□ -1.56
USP25-210ENST00000549362 TPX2Q9ULW0 747 aaKnown RBP5.3□□□□□ -1.56
USP25-210ENST00000549362 AKT3Q9Y243 479 aa5.3□□□□□ -1.56
USP25-210ENST00000549362 SHPRHQ149N8 1683 aa5.3□□□□□ -1.56
USP25-210ENST00000549362 MROH1Q8NDA8 1641 aa5.3□□□□□ -1.56
USP25-210ENST00000549362 USP19O94966 1318 aa5.29□□□□□ -1.56
USP25-210ENST00000549362 PPRC1Q5VV67 1664 aaKnown RBP5.29□□□□□ -1.56
USP25-210ENST00000549362 MED14O60244 1454 aa5.29□□□□□ -1.56
USP25-210ENST00000549362 MLH3Q9UHC1 1453 aa5.29□□□□□ -1.56
USP25-210ENST00000549362 PRR19A6NJB7 356 aa5.29□□□□□ -1.56
USP25-210ENST00000549362 IRS4O14654 1257 aaPredicted RBP5.29□□□□□ -1.56
USP25-210ENST00000549362 PRODHO43272 600 aa5.29□□□□□ -1.56
USP25-210ENST00000549362 PARNO95453 639 aaKnown RBP5.29□□□□□ -1.56
USP25-210ENST00000549362 APPP05067 770 aa5.29□□□□□ -1.56
USP25-210ENST00000549362 NFICP08651 508 aa5.29□□□□□ -1.56
USP25-210ENST00000549362 MYCLP1P12525 358 aaPredicted RBP5.29□□□□□ -1.56
USP25-210ENST00000549362 ITGB5P18084 799 aa5.29□□□□□ -1.56
USP25-210ENST00000549362 CYP7A1P22680 504 aa5.29□□□□□ -1.56
USP25-210ENST00000549362 MRE11P49959 708 aa5.29□□□□□ -1.56
USP25-210ENST00000549362 AMPD3Q01432 767 aa5.29□□□□□ -1.56
USP25-210ENST00000549362 PABPC4Q13310 644 aaKnown RBP eCLIP5.29□□□□□ -1.56
USP25-210ENST00000549362 GLIPR1L2Q4G1C9 344 aa5.29□□□□□ -1.56
USP25-210ENST00000549362 ANKRD39Q53RE8 183 aa5.29□□□□□ -1.56
USP25-210ENST00000549362 ATF7IPQ6VMQ6 1270 aa5.29□□□□□ -1.56
USP25-210ENST00000549362 NSMFQ6X4W1 530 aa5.29□□□□□ -1.56
USP25-210ENST00000549362 SKAP1Q86WV1 359 aa5.29□□□□□ -1.56
USP25-210ENST00000549362 SCUBE1Q8IWY4 988 aa5.29□□□□□ -1.56
USP25-210ENST00000549362 GIMAP7Q8NHV1 300 aa5.29□□□□□ -1.56
USP25-210ENST00000549362 STAG1Q8WVM7 1258 aa5.29□□□□□ -1.56
USP25-210ENST00000549362 ANP32BQ92688 251 aaKnown RBP5.29□□□□□ -1.56
USP25-210ENST00000549362 NINJ1Q92982 152 aa5.29□□□□□ -1.56
USP25-210ENST00000549362 SNX21Q969T3 373 aa5.29□□□□□ -1.56
USP25-210ENST00000549362 GCC1Q96CN9 775 aa5.29□□□□□ -1.56
USP25-210ENST00000549362 MFSD3Q96ES6 412 aa5.29□□□□□ -1.56
USP25-210ENST00000549362 SLC12A5Q9H2X9 1139 aa5.29□□□□□ -1.56
USP25-210ENST00000549362 ACSS3Q9H6R3 686 aa5.29□□□□□ -1.56
USP25-210ENST00000549362 SLC52A1Q9NWF4 448 aa5.29□□□□□ -1.56
USP25-210ENST00000549362 WHRNQ9P202 907 aa5.29□□□□□ -1.56
USP25-210ENST00000549362 APEX2Q9UBZ4 518 aa5.29□□□□□ -1.56
USP25-210ENST00000549362 SUSD2Q9UGT4 822 aa5.29□□□□□ -1.56
USP25-210ENST00000549362 MRPS23Q9Y3D9 190 aaKnown RBP5.29□□□□□ -1.56
USP25-210ENST00000549362 ZNF451Q9Y4E5 1061 aa5.29□□□□□ -1.56
USP25-210ENST00000549362 PCDHB12Q9Y5F1 795 aa5.29□□□□□ -1.56
USP25-210ENST00000549362 ZFYVE9O95405 1425 aa5.29□□□□□ -1.56
USP25-210ENST00000549362 ADGRB2O60241 1585 aa5.29□□□□□ -1.56
USP25-210ENST00000549362 ERCC6L2Q5T890 1561 aa5.29□□□□□ -1.56
USP25-210ENST00000549362 REREQ9P2R6 1566 aa5.29□□□□□ -1.56
USP25-210ENST00000549362 MROH2AA6NES4 1674 aa5.28□□□□□ -1.56
USP25-210ENST00000549362 PRRG2O14669 202 aa5.28□□□□□ -1.56
USP25-210ENST00000549362 PLD2O14939 933 aa5.28□□□□□ -1.56
USP25-210ENST00000549362 CBFA2T2O43439 604 aa5.28□□□□□ -1.56
USP25-210ENST00000549362 RAPGEF3O95398 923 aa5.28□□□□□ -1.56
USP25-210ENST00000549362 LMOD3Q0VAK6 560 aa5.28□□□□□ -1.56
USP25-210ENST00000549362 PPP2R5DQ14738 602 aa5.28□□□□□ -1.56
USP25-210ENST00000549362 CBX2Q14781 532 aaPredicted RBP5.28□□□□□ -1.56
USP25-210ENST00000549362 UVSSAQ2YD98 709 aa5.28□□□□□ -1.56
USP25-210ENST00000549362 PLEKHG6Q3KR16 790 aa5.28□□□□□ -1.56
USP25-210ENST00000549362 YOD1Q5VVQ6 348 aaPredicted RBP5.28□□□□□ -1.56
USP25-210ENST00000549362 FOXB2Q5VYV0 432 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms