RNA–Protein interactions for RNA: ENST00000549282.5

ERBB3-209, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 4

Gene ERBB3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-209ENST00000549282 NOD1Q9Y239 953 aa17.07■□□□□ 0.32
ERBB3-209ENST00000549282 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.07■□□□□ 0.32
ERBB3-209ENST00000549282 PTPRSQ13332 1948 aa17.06■□□□□ 0.32
ERBB3-209ENST00000549282 RAD50Q92878 1312 aa17.06■□□□□ 0.32
ERBB3-209ENST00000549282 CALML3P27482 149 aa17.06■□□□□ 0.32
ERBB3-209ENST00000549282 CHMP4BP1P59074 171 aa17.06■□□□□ 0.32
ERBB3-209ENST00000549282 WDR5P61964 334 aaKnown RBP17.06■□□□□ 0.32
ERBB3-209ENST00000549282 PDE4DQ08499 809 aa17.06■□□□□ 0.32
ERBB3-209ENST00000549282 GPNMBQ14956 572 aa17.06■□□□□ 0.32
ERBB3-209ENST00000549282 PPP2R5BQ15173 497 aa17.06■□□□□ 0.32
ERBB3-209ENST00000549282 PTGISQ16647 500 aa17.06■□□□□ 0.32
ERBB3-209ENST00000549282 CCDC96Q2M329 555 aa17.06■□□□□ 0.32
ERBB3-209ENST00000549282 LRRFIP1Q32MZ4 808 aaKnown RBP17.06■□□□□ 0.32
ERBB3-209ENST00000549282 BTNL9Q6UXG8 535 aa17.06■□□□□ 0.32
ERBB3-209ENST00000549282 DCAF4Q8WV16 495 aa17.06■□□□□ 0.32
ERBB3-209ENST00000549282 GPATCH3Q96I76 525 aa17.06■□□□□ 0.32
ERBB3-209ENST00000549282 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.05■□□□□ 0.32
ERBB3-209ENST00000549282 TXNP10599 105 aaKnown RBP17.05■□□□□ 0.32
ERBB3-209ENST00000549282 NOVP48745 357 aa17.05■□□□□ 0.32
ERBB3-209ENST00000549282 CTDSPL2Q05D32 466 aa17.05■□□□□ 0.32
ERBB3-209ENST00000549282 SYDE2Q5VT97 1194 aa17.05■□□□□ 0.32
ERBB3-209ENST00000549282 SLC30A10Q6XR72 485 aa17.05■□□□□ 0.32
ERBB3-209ENST00000549282 RNF207Q6ZRF8 634 aa17.05■□□□□ 0.32
ERBB3-209ENST00000549282 AFAP1L1Q8TED9 768 aa17.05■□□□□ 0.32
ERBB3-209ENST00000549282 GDPD5Q8WTR4 605 aa17.05■□□□□ 0.32
ERBB3-209ENST00000549282 SCFD2Q8WU76 684 aa17.05■□□□□ 0.32
ERBB3-209ENST00000549282 CLEC4DQ8WXI8 215 aa17.05■□□□□ 0.32
ERBB3-209ENST00000549282 SUGCTQ9HAC7 445 aa17.05■□□□□ 0.32
ERBB3-209ENST00000549282 TANC1Q9C0D5 1861 aa17.05■□□□□ 0.32
ERBB3-209ENST00000549282 RANBP6O60518 1105 aaKnown RBP17.04■□□□□ 0.32
ERBB3-209ENST00000549282 ALYREFQ86V81 257 aaKnown RBP17.04■□□□□ 0.32
ERBB3-209ENST00000549282 CCDC155Q8N6L0 562 aa17.04■□□□□ 0.32
ERBB3-209ENST00000549282 CAGE1Q8TC20 777 aa17.04■□□□□ 0.32
ERBB3-209ENST00000549282 CTAGE1Q96RT6 745 aa17.04■□□□□ 0.32
ERBB3-209ENST00000549282 MPHOSPH6Q99547 160 aaKnown RBP17.04■□□□□ 0.32
ERBB3-209ENST00000549282 MTUS1Q9ULD2 1270 aa17.04■□□□□ 0.32
ERBB3-209ENST00000549282 SELPP16109 830 aa17.03■□□□□ 0.32
ERBB3-209ENST00000549282 EDNRBP24530 442 aa17.03■□□□□ 0.32
ERBB3-209ENST00000549282 ERVK-21P61565 698 aa17.03■□□□□ 0.32
ERBB3-209ENST00000549282 RPS6P62753 249 aaKnown RBP17.03■□□□□ 0.32
ERBB3-209ENST00000549282 DEFB103AP81534 67 aa17.03■□□□□ 0.32
ERBB3-209ENST00000549282 ZMYM1Q5SVZ6 1142 aa17.03■□□□□ 0.32
ERBB3-209ENST00000549282 FAM178BQ8IXR5 827 aa17.03■□□□□ 0.32
ERBB3-209ENST00000549282 GJD3Q8N144 294 aa17.03■□□□□ 0.32
ERBB3-209ENST00000549282 DNERQ8NFT8 737 aa17.03■□□□□ 0.32
ERBB3-209ENST00000549282 TGS1Q96RS0 853 aaKnown RBP17.03■□□□□ 0.32
ERBB3-209ENST00000549282 RAD9AQ99638 391 aa17.03■□□□□ 0.32
ERBB3-209ENST00000549282 DCTPP1Q9H773 170 aa17.03■□□□□ 0.32
ERBB3-209ENST00000549282 UBE2ZQ9H832 354 aaPredicted RBP17.03■□□□□ 0.32
ERBB3-209ENST00000549282 GPCPD1Q9NPB8 672 aa17.03■□□□□ 0.32
ERBB3-209ENST00000549282 COL4A4P53420 1690 aaPredicted RBP17.02■□□□□ 0.32
ERBB3-209ENST00000549282 PRR33A8MZF0 331 aa17.02■□□□□ 0.32
ERBB3-209ENST00000549282 ARIH2O95376 493 aa17.02■□□□□ 0.32
ERBB3-209ENST00000549282 GJB5O95377 273 aa17.02■□□□□ 0.32
ERBB3-209ENST00000549282 LEXMQ3ZCV2 418 aa17.02■□□□□ 0.32
ERBB3-209ENST00000549282 GDF6Q6KF10 455 aaPredicted RBP17.02■□□□□ 0.32
ERBB3-209ENST00000549282 CNKSR3Q6P9H4 555 aa17.02■□□□□ 0.32
ERBB3-209ENST00000549282 WDFY4Q6ZS81 3184 aa17.01■□□□□ 0.31
ERBB3-209ENST00000549282 FRMPD2Q68DX3 1309 aaPredicted RBP17.01■□□□□ 0.31
ERBB3-209ENST00000549282 LINC01553A4QN01 128 aa17.01■□□□□ 0.31
ERBB3-209ENST00000549282 FOXP2O15409 715 aa17.01■□□□□ 0.31
ERBB3-209ENST00000549282 PARNO95453 639 aaKnown RBP17.01■□□□□ 0.31
ERBB3-209ENST00000549282 CXCL10P02778 98 aa17.01■□□□□ 0.31
ERBB3-209ENST00000549282 TCTN1Q2MV58 587 aa17.01■□□□□ 0.31
ERBB3-209ENST00000549282 LRRC8DQ7L1W4 858 aa17.01■□□□□ 0.31
ERBB3-209ENST00000549282 SESTD1Q86VW0 696 aa17.01■□□□□ 0.31
ERBB3-209ENST00000549282 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.01■□□□□ 0.31
ERBB3-209ENST00000549282 AFG1LQ8WV93 481 aa17.01■□□□□ 0.31
ERBB3-209ENST00000549282 DHX38Q92620 1227 aaKnown RBP17.01■□□□□ 0.31
ERBB3-209ENST00000549282 TMEM47Q9BQJ4 181 aa17.01■□□□□ 0.31
ERBB3-209ENST00000549282 ABHD14A-ACY1A0A1B0GW23 586 aa17■□□□□ 0.31
ERBB3-209ENST00000549282 B4DLN1 442 aa17■□□□□ 0.31
ERBB3-209ENST00000549282 ORC4O43929 436 aa17■□□□□ 0.31
ERBB3-209ENST00000549282 NBNO60934 754 aa17■□□□□ 0.31
ERBB3-209ENST00000549282 TOP1P11387 765 aaKnown RBP17■□□□□ 0.31
ERBB3-209ENST00000549282 KCNA5P22460 613 aa17■□□□□ 0.31
ERBB3-209ENST00000549282 MRPL12P52815 198 aaKnown RBP17■□□□□ 0.31
ERBB3-209ENST00000549282 CCDC62Q6P9F0 684 aa17■□□□□ 0.31
ERBB3-209ENST00000549282 KAT2BQ92831 832 aa17■□□□□ 0.31
ERBB3-209ENST00000549282 FSD1Q9BTV5 496 aa17■□□□□ 0.31
ERBB3-209ENST00000549282 ANAPC4Q9UJX5 808 aa17■□□□□ 0.31
ERBB3-209ENST00000549282 PNMA2Q9UL42 364 aa17■□□□□ 0.31
ERBB3-209ENST00000549282 MMP3P08254 477 aa16.99■□□□□ 0.31
ERBB3-209ENST00000549282 FGRP09769 529 aa16.99■□□□□ 0.31
ERBB3-209ENST00000549282 CKBP12277 381 aa16.99■□□□□ 0.31
ERBB3-209ENST00000549282 IL9P15248 144 aa16.99■□□□□ 0.31
ERBB3-209ENST00000549282 SSTR3P32745 418 aaPredicted RBP16.99■□□□□ 0.31
ERBB3-209ENST00000549282 RBL2Q08999 1139 aa16.99■□□□□ 0.31
ERBB3-209ENST00000549282 IKBKEQ14164 716 aa16.99■□□□□ 0.31
ERBB3-209ENST00000549282 LY6KQ17RY6 165 aa16.99■□□□□ 0.31
ERBB3-209ENST00000549282 FAM117BQ6P1L5 589 aa16.99■□□□□ 0.31
ERBB3-209ENST00000549282 TRIOO75962 3097 aa16.99■□□□□ 0.31
ERBB3-209ENST00000549282 TTC41PQ6P2S7 1318 aa16.98■□□□□ 0.31
ERBB3-209ENST00000549282 GH1P01241 217 aa16.98■□□□□ 0.31
ERBB3-209ENST00000549282 ALADP13716 330 aa16.98■□□□□ 0.31
ERBB3-209ENST00000549282 CASTP20810 708 aaKnown RBP16.98■□□□□ 0.31
ERBB3-209ENST00000549282 PTCRAQ6ISU1 281 aaPredicted RBP16.98■□□□□ 0.31
ERBB3-209ENST00000549282 SEPT14Q6ZU15 432 aa16.98■□□□□ 0.31
ERBB3-209ENST00000549282 CHST3Q7LGC8 479 aa16.98■□□□□ 0.31
ERBB3-209ENST00000549282 RGS22Q8NE09 1264 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms