RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 TDO2P48775 406 aa14.44□□□□□ -0.1
DDX54-206ENST00000549271 CPT1AP50416 773 aa14.44□□□□□ -0.1
DDX54-206ENST00000549271 PTPN11Q06124 597 aaPredicted RBP14.44□□□□□ -0.1
DDX54-206ENST00000549271 FAM47CQ5HY64 1035 aa14.44□□□□□ -0.1
DDX54-206ENST00000549271 KIAA1211Q6ZU35 1233 aa14.44□□□□□ -0.1
DDX54-206ENST00000549271 IFNL3Q8IZI9 196 aa14.44□□□□□ -0.1
DDX54-206ENST00000549271 PRSS33Q8NF86 280 aa14.44□□□□□ -0.1
DDX54-206ENST00000549271 NEDD1Q8NHV4 660 aa14.44□□□□□ -0.1
DDX54-206ENST00000549271 H3BQ06 376 aaPredicted RBP14.43□□□□□ -0.1
DDX54-206ENST00000549271 M0R2C6 588 aa14.43□□□□□ -0.1
DDX54-206ENST00000549271 TTLL1O95922 423 aa14.43□□□□□ -0.1
DDX54-206ENST00000549271 IGHDP01880 384 aa14.43□□□□□ -0.1
DDX54-206ENST00000549271 MYL3P08590 195 aa14.43□□□□□ -0.1
DDX54-206ENST00000549271 COL19A1Q14993 1142 aa14.43□□□□□ -0.1
DDX54-206ENST00000549271 TKFCQ3LXA3 575 aa14.43□□□□□ -0.1
DDX54-206ENST00000549271 PPP1R13LQ8WUF5 828 aa14.43□□□□□ -0.1
DDX54-206ENST00000549271 CEP95Q96GE4 821 aa14.43□□□□□ -0.1
DDX54-206ENST00000549271 NACAP1Q9BZK3 213 aa14.43□□□□□ -0.1
DDX54-206ENST00000549271 CYP39A1Q9NYL5 469 aa14.43□□□□□ -0.1
DDX54-206ENST00000549271 RBM47A0AV96 593 aaKnown RBP14.42□□□□□ -0.1
DDX54-206ENST00000549271 MX1P20591 662 aa14.42□□□□□ -0.1
DDX54-206ENST00000549271 FOXK2Q01167 660 aa14.42□□□□□ -0.1
DDX54-206ENST00000549271 ADHFE1Q8IWW8 467 aa14.42□□□□□ -0.1
DDX54-206ENST00000549271 SMC5Q8IY18 1101 aa14.42□□□□□ -0.1
DDX54-206ENST00000549271 STK11IPQ8N1F8 1099 aa14.42□□□□□ -0.1
DDX54-206ENST00000549271 AFAP1L1Q8TED9 768 aa14.42□□□□□ -0.1
DDX54-206ENST00000549271 MRPL38Q96DV4 380 aaKnown RBP14.42□□□□□ -0.1
DDX54-206ENST00000549271 TRERF1Q96PN7 1200 aa14.42□□□□□ -0.1
DDX54-206ENST00000549271 CTAGE1Q96RT6 745 aa14.42□□□□□ -0.1
DDX54-206ENST00000549271 GPHNQ9NQX3 736 aaPredicted RBP14.42□□□□□ -0.1
DDX54-206ENST00000549271 ATG2AQ2TAZ0 1938 aa14.41□□□□□ -0.1
DDX54-206ENST00000549271 MICAL3Q7RTP6 2002 aa14.41□□□□□ -0.1
DDX54-206ENST00000549271 PRDM1O75626 825 aa14.41□□□□□ -0.1
DDX54-206ENST00000549271 CXCL10P02778 98 aa14.41□□□□□ -0.1
DDX54-206ENST00000549271 APPP05067 770 aa14.41□□□□□ -0.1
DDX54-206ENST00000549271 BMP3P12645 472 aa14.41□□□□□ -0.1
DDX54-206ENST00000549271 IRS1P35568 1242 aa14.41□□□□□ -0.1
DDX54-206ENST00000549271 PDE4BQ07343 736 aa14.41□□□□□ -0.1
DDX54-206ENST00000549271 TCTN1Q2MV58 587 aa14.41□□□□□ -0.1
DDX54-206ENST00000549271 MUM1L1Q5H9M0 696 aa14.41□□□□□ -0.1
DDX54-206ENST00000549271 PPP4R3BQ5MIZ7 849 aa14.41□□□□□ -0.1
DDX54-206ENST00000549271 ZMYM1Q5SVZ6 1142 aa14.41□□□□□ -0.1
DDX54-206ENST00000549271 CNKSR3Q6P9H4 555 aa14.41□□□□□ -0.1
DDX54-206ENST00000549271 CAGE1Q8TC20 777 aa14.41□□□□□ -0.1
DDX54-206ENST00000549271 PABPC5Q96DU9 382 aaKnown RBP14.41□□□□□ -0.1
DDX54-206ENST00000549271 GMCL1Q96IK5 515 aa14.41□□□□□ -0.1
DDX54-206ENST00000549271 PURBQ96QR8 312 aaKnown RBP14.41□□□□□ -0.1
DDX54-206ENST00000549271 WDR11Q9BZH6 1224 aa14.41□□□□□ -0.1
DDX54-206ENST00000549271 FAM50BQ9Y247 325 aa14.41□□□□□ -0.1
DDX54-206ENST00000549271 KMT2EQ8IZD2 1858 aa14.41□□□□□ -0.1
DDX54-206ENST00000549271 ZFHX2Q9C0A1 2572 aaPredicted RBP14.41□□□□□ -0.1
DDX54-206ENST00000549271 NLRC5Q86WI3 1866 aa14.4□□□□□ -0.1
DDX54-206ENST00000549271 A6NJR5 290 aa14.4□□□□□ -0.1
DDX54-206ENST00000549271 TMEM232C9JQI7 657 aa14.4□□□□□ -0.1
DDX54-206ENST00000549271 KPNA6O60684 536 aa14.4□□□□□ -0.1
DDX54-206ENST00000549271 PLA2G6O60733 806 aa14.4□□□□□ -0.1
DDX54-206ENST00000549271 SLC3A2P08195 630 aaKnown RBP14.4□□□□□ -0.1
DDX54-206ENST00000549271 TSPY3P0CV98 308 aa14.4□□□□□ -0.1
DDX54-206ENST00000549271 TSPY8P0CW00 308 aa14.4□□□□□ -0.1
DDX54-206ENST00000549271 ALAS1P13196 640 aa14.4□□□□□ -0.1
DDX54-206ENST00000549271 STAT2P52630 851 aa14.4□□□□□ -0.1
DDX54-206ENST00000549271 PDE1AP54750 535 aa14.4□□□□□ -0.1
DDX54-206ENST00000549271 PTPN5P54829 565 aa14.4□□□□□ -0.1
DDX54-206ENST00000549271 HERC4Q5GLZ8 1057 aaPredicted RBP14.4□□□□□ -0.1
DDX54-206ENST00000549271 SLFN13Q68D06 897 aa14.4□□□□□ -0.1
DDX54-206ENST00000549271 BMP8AQ7Z5Y6 402 aa14.4□□□□□ -0.1
DDX54-206ENST00000549271 FBXO22Q8NEZ5 403 aa14.4□□□□□ -0.1
DDX54-206ENST00000549271 OR6J1Q8NGC5 347 aa14.4□□□□□ -0.1
DDX54-206ENST00000549271 C17orf80Q9BSJ5 609 aa14.4□□□□□ -0.1
DDX54-206ENST00000549271 UPF3BQ9BZI7 483 aaKnown RBP14.4□□□□□ -0.1
DDX54-206ENST00000549271 RWDD1Q9H446 243 aaPredicted RBP14.4□□□□□ -0.1
DDX54-206ENST00000549271 CTNNA3Q9UI47 895 aa14.4□□□□□ -0.1
DDX54-206ENST00000549271 LOC102724159A0A0B4J2E5 919 aa14.39□□□□□ -0.11
DDX54-206ENST00000549271 ABHD14A-ACY1A0A1B0GW23 586 aa14.39□□□□□ -0.11
DDX54-206ENST00000549271 NBNO60934 754 aa14.39□□□□□ -0.11
DDX54-206ENST00000549271 PARNO95453 639 aaKnown RBP14.39□□□□□ -0.11
DDX54-206ENST00000549271 SELPP16109 830 aa14.39□□□□□ -0.11
DDX54-206ENST00000549271 TFAP4Q01664 338 aa14.39□□□□□ -0.11
DDX54-206ENST00000549271 PPARAQ07869 468 aa14.39□□□□□ -0.11
DDX54-206ENST00000549271 RBL2Q08999 1139 aa14.39□□□□□ -0.11
DDX54-206ENST00000549271 PWP2Q15269 919 aaKnown RBP14.39□□□□□ -0.11
DDX54-206ENST00000549271 IER5LQ5T953 404 aa14.39□□□□□ -0.11
DDX54-206ENST00000549271 LRRC8DQ7L1W4 858 aa14.39□□□□□ -0.11
DDX54-206ENST00000549271 FAM160B2Q86V87 743 aa14.39□□□□□ -0.11
DDX54-206ENST00000549271 LRRC47Q8N1G4 583 aaKnown RBP14.39□□□□□ -0.11
DDX54-206ENST00000549271 CCDC155Q8N6L0 562 aa14.39□□□□□ -0.11
DDX54-206ENST00000549271 CHURC1Q8WUH1 139 aa14.39□□□□□ -0.11
DDX54-206ENST00000549271 SEC62Q99442 399 aaKnown RBP14.39□□□□□ -0.11
DDX54-206ENST00000549271 NAPBQ9H115 298 aa14.39□□□□□ -0.11
DDX54-206ENST00000549271 NOD1Q9Y239 953 aa14.39□□□□□ -0.11
DDX54-206ENST00000549271 MYO7AQ13402 2215 aa14.39□□□□□ -0.11
DDX54-206ENST00000549271 CACNA1HO95180 2353 aa14.39□□□□□ -0.11
DDX54-206ENST00000549271 EFCAB14O75071 495 aa14.38□□□□□ -0.11
DDX54-206ENST00000549271 NOVP48745 357 aa14.38□□□□□ -0.11
DDX54-206ENST00000549271 PTGISQ16647 500 aa14.38□□□□□ -0.11
DDX54-206ENST00000549271 PTPROQ16827 1216 aa14.38□□□□□ -0.11
DDX54-206ENST00000549271 TIGD5Q53EQ6 642 aa14.38□□□□□ -0.11
DDX54-206ENST00000549271 BRDTQ58F21 947 aaPredicted RBP14.38□□□□□ -0.11
DDX54-206ENST00000549271 BANK1Q8NDB2 785 aa14.38□□□□□ -0.11
DDX54-206ENST00000549271 STAG1Q8WVM7 1258 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms