RNA–Protein interactions for RNA: ENST00000549131.1

LINC00661-203, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-203ENST00000549131 RMDN3Q96TC7 470 aa17.05■□□□□ 0.32
LINC00661-203ENST00000549131 MTA3Q9BTC8 594 aa17.05■□□□□ 0.32
LINC00661-203ENST00000549131 SCN10AQ9Y5Y9 1956 aa17.05■□□□□ 0.32
LINC00661-203ENST00000549131 LAMA2P24043 3122 aaKnown RBP17.04■□□□□ 0.32
LINC00661-203ENST00000549131 RBM47A0AV96 593 aaKnown RBP17.04■□□□□ 0.32
LINC00661-203ENST00000549131 ARVCFO00192 962 aa17.04■□□□□ 0.32
LINC00661-203ENST00000549131 OPLAHO14841 1288 aa17.04■□□□□ 0.32
LINC00661-203ENST00000549131 KIAA0355O15063 1070 aa17.04■□□□□ 0.32
LINC00661-203ENST00000549131 CYTH3O43739 400 aa17.04■□□□□ 0.32
LINC00661-203ENST00000549131 CABYRO75952 493 aa17.04■□□□□ 0.32
LINC00661-203ENST00000549131 EIF2AK2P19525 551 aaKnown RBP17.04■□□□□ 0.32
LINC00661-203ENST00000549131 KIF5BP33176 963 aa17.04■□□□□ 0.32
LINC00661-203ENST00000549131 CPT1AP50416 773 aa17.04■□□□□ 0.32
LINC00661-203ENST00000549131 FAAP100Q0VG06 881 aa17.04■□□□□ 0.32
LINC00661-203ENST00000549131 COL9A3Q14050 684 aaPredicted RBP17.04■□□□□ 0.32
LINC00661-203ENST00000549131 ARHGEF16Q5VV41 709 aa17.04■□□□□ 0.32
LINC00661-203ENST00000549131 LRRC2Q9BYS8 371 aa17.04■□□□□ 0.32
LINC00661-203ENST00000549131 RIOX1Q9H6W3 641 aa17.04■□□□□ 0.32
LINC00661-203ENST00000549131 DOCK5Q9H7D0 1870 aa17.03■□□□□ 0.32
LINC00661-203ENST00000549131 PNMA6FA0A0J9YX94 578 aa17.03■□□□□ 0.32
LINC00661-203ENST00000549131 NKRFO15226 690 aaKnown RBP eCLIP17.03■□□□□ 0.32
LINC00661-203ENST00000549131 TLR3O15455 904 aaKnown RBP17.03■□□□□ 0.32
LINC00661-203ENST00000549131 TXNP10599 105 aaKnown RBP17.03■□□□□ 0.32
LINC00661-203ENST00000549131 ITGB8P26012 769 aa17.03■□□□□ 0.32
LINC00661-203ENST00000549131 HOXA13P31271 388 aaPredicted RBP17.03■□□□□ 0.32
LINC00661-203ENST00000549131 HSD17B4P51659 736 aa17.03■□□□□ 0.32
LINC00661-203ENST00000549131 TRAF1Q13077 416 aa17.03■□□□□ 0.32
LINC00661-203ENST00000549131 TTLL4Q14679 1199 aa17.03■□□□□ 0.32
LINC00661-203ENST00000549131 LRIT3Q3SXY7 679 aa17.03■□□□□ 0.32
LINC00661-203ENST00000549131 SEPT14Q6ZU15 432 aa17.03■□□□□ 0.32
LINC00661-203ENST00000549131 FAM126BQ8IXS8 530 aa17.03■□□□□ 0.32
LINC00661-203ENST00000549131 PXMP2Q9NR77 195 aa17.03■□□□□ 0.32
LINC00661-203ENST00000549131 TANC1Q9C0D5 1861 aa17.03■□□□□ 0.32
LINC00661-203ENST00000549131 MYL3P08590 195 aa17.02■□□□□ 0.32
LINC00661-203ENST00000549131 RXRAP19793 462 aa17.02■□□□□ 0.32
LINC00661-203ENST00000549131 CDK7P50613 346 aa17.02■□□□□ 0.32
LINC00661-203ENST00000549131 PSMC6P62333 389 aa17.02■□□□□ 0.32
LINC00661-203ENST00000549131 STXBP2Q15833 593 aa17.02■□□□□ 0.32
LINC00661-203ENST00000549131 BRDTQ58F21 947 aaPredicted RBP17.02■□□□□ 0.32
LINC00661-203ENST00000549131 RAB11FIP4Q86YS3 637 aa17.02■□□□□ 0.32
LINC00661-203ENST00000549131 COPS5Q92905 334 aa17.02■□□□□ 0.32
LINC00661-203ENST00000549131 IWS1Q96ST2 819 aa17.02■□□□□ 0.32
LINC00661-203ENST00000549131 MAP3K14Q99558 947 aa17.02■□□□□ 0.32
LINC00661-203ENST00000549131 POLR3EQ9NVU0 708 aa17.02■□□□□ 0.32
LINC00661-203ENST00000549131 SEC63Q9UGP8 760 aaKnown RBP17.02■□□□□ 0.32
LINC00661-203ENST00000549131 TBX21Q9UL17 535 aa17.02■□□□□ 0.32
LINC00661-203ENST00000549131 ARIH2O95376 493 aa17.01■□□□□ 0.31
LINC00661-203ENST00000549131 CALM1P0DP23 149 aa17.01■□□□□ 0.31
LINC00661-203ENST00000549131 CALM2P0DP24 149 aa17.01■□□□□ 0.31
LINC00661-203ENST00000549131 CALM3P0DP25 149 aa17.01■□□□□ 0.31
LINC00661-203ENST00000549131 LIFRP42702 1097 aa17.01■□□□□ 0.31
LINC00661-203ENST00000549131 GHRHRQ02643 423 aa17.01■□□□□ 0.31
LINC00661-203ENST00000549131 FPGSQ05932 587 aa17.01■□□□□ 0.31
LINC00661-203ENST00000549131 ITGA7Q13683 1181 aa17.01■□□□□ 0.31
LINC00661-203ENST00000549131 C9orf50Q5SZB4 431 aa17.01■□□□□ 0.31
LINC00661-203ENST00000549131 MICU3Q86XE3 530 aa17.01■□□□□ 0.31
LINC00661-203ENST00000549131 TMTC2Q8N394 836 aa17.01■□□□□ 0.31
LINC00661-203ENST00000549131 RRP36Q96EU6 259 aaKnown RBP17.01■□□□□ 0.31
LINC00661-203ENST00000549131 SPZ1Q9BXG8 430 aa17.01■□□□□ 0.31
LINC00661-203ENST00000549131 SLC12A7Q9Y666 1083 aa17.01■□□□□ 0.31
LINC00661-203ENST00000549131 GCOM1H8Y6P7 765 aaPredicted RBP17■□□□□ 0.31
LINC00661-203ENST00000549131 PLEKHA8P1O95397 391 aa17■□□□□ 0.31
LINC00661-203ENST00000549131 NR3C2P08235 984 aa17■□□□□ 0.31
LINC00661-203ENST00000549131 POLR2MP0CAP2 368 aa17■□□□□ 0.31
LINC00661-203ENST00000549131 MYCLP12524 364 aaPredicted RBP17■□□□□ 0.31
LINC00661-203ENST00000549131 PURAQ00577 322 aaKnown RBP17■□□□□ 0.31
LINC00661-203ENST00000549131 SHHQ15465 462 aa17■□□□□ 0.31
LINC00661-203ENST00000549131 FCHSD1Q86WN1 690 aa17■□□□□ 0.31
LINC00661-203ENST00000549131 NEK1Q96PY6 1258 aa17■□□□□ 0.31
LINC00661-203ENST00000549131 PPP1R12CQ9BZL4 782 aa17■□□□□ 0.31
LINC00661-203ENST00000549131 MAP3K20Q9NYL2 800 aaKnown RBP17■□□□□ 0.31
LINC00661-203ENST00000549131 TIMP1P01033 207 aa16.99■□□□□ 0.31
LINC00661-203ENST00000549131 GNAQP50148 359 aa16.99■□□□□ 0.31
LINC00661-203ENST00000549131 LY6KQ17RY6 165 aa16.99■□□□□ 0.31
LINC00661-203ENST00000549131 SAMD3Q8N6K7 520 aa16.99■□□□□ 0.31
LINC00661-203ENST00000549131 TCEANC2Q96MN5 208 aa16.99■□□□□ 0.31
LINC00661-203ENST00000549131 LZTS2Q9BRK4 669 aa16.99■□□□□ 0.31
LINC00661-203ENST00000549131 PDCD2LQ9BRP1 358 aa16.99■□□□□ 0.31
LINC00661-203ENST00000549131 MRVI1Q9Y6F6 885 aa16.99■□□□□ 0.31
LINC00661-203ENST00000549131 GRIN2DO15399 1336 aa16.98■□□□□ 0.31
LINC00661-203ENST00000549131 SCN5AQ14524 2016 aa16.98■□□□□ 0.31
LINC00661-203ENST00000549131 EIF3JO75822 258 aaKnown RBP16.98■□□□□ 0.31
LINC00661-203ENST00000549131 GH1P01241 217 aa16.98■□□□□ 0.31
LINC00661-203ENST00000549131 CD4P01730 458 aa16.98■□□□□ 0.31
LINC00661-203ENST00000549131 KRT32Q14532 448 aa16.98■□□□□ 0.31
LINC00661-203ENST00000549131 PGM5Q15124 567 aa16.98■□□□□ 0.31
LINC00661-203ENST00000549131 FAM47CQ5HY64 1035 aa16.98■□□□□ 0.31
LINC00661-203ENST00000549131 CCDC62Q6P9F0 684 aa16.98■□□□□ 0.31
LINC00661-203ENST00000549131 RASEFQ8IZ41 740 aa16.98■□□□□ 0.31
LINC00661-203ENST00000549131 CMTR1Q8N1G2 835 aaKnown RBP16.98■□□□□ 0.31
LINC00661-203ENST00000549131 SLC43A3Q8NBI5 491 aa16.98■□□□□ 0.31
LINC00661-203ENST00000549131 IL31RAQ8NI17 732 aa16.98■□□□□ 0.31
LINC00661-203ENST00000549131 RNPC3Q96LT9 517 aaKnown RBP16.98■□□□□ 0.31
LINC00661-203ENST00000549131 MTG1Q9BT17 334 aaPredicted RBP16.98■□□□□ 0.31
LINC00661-203ENST00000549131 SEZ6LQ9BYH1 1024 aa16.98■□□□□ 0.31
LINC00661-203ENST00000549131 GBF1Q92538 1859 aa16.98■□□□□ 0.31
LINC00661-203ENST00000549131 A6NJR5 290 aa16.97■□□□□ 0.31
LINC00661-203ENST00000549131 B4GALT4O60513 344 aa16.97■□□□□ 0.31
LINC00661-203ENST00000549131 CCND2P30279 289 aa16.97■□□□□ 0.31
LINC00661-203ENST00000549131 EPHB4P54760 987 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms