RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 TOGARAM1Q9Y4F4 1720 aa25.61■■□□□ 1.69
NPAS3-206ENST00000548645 ZNF233A6NK53 670 aa25.6■■□□□ 1.69
NPAS3-206ENST00000548645 CABP7Q86V35 215 aa25.6■■□□□ 1.69
NPAS3-206ENST00000548645 LRRC15Q8TF66 581 aa25.6■■□□□ 1.69
NPAS3-206ENST00000548645 GPKOWQ92917 476 aaPredicted RBP eCLIP25.6■■□□□ 1.69
NPAS3-206ENST00000548645 AK8Q96MA6 479 aa25.6■■□□□ 1.69
NPAS3-206ENST00000548645 NDST4Q9H3R1 872 aa25.6■■□□□ 1.69
NPAS3-206ENST00000548645 MMRN2Q9H8L6 949 aa25.6■■□□□ 1.69
NPAS3-206ENST00000548645 BAZ2AQ9UIF9 1905 aaKnown RBP25.6■■□□□ 1.69
NPAS3-206ENST00000548645 CARSP49589 748 aaKnown RBP25.6■■□□□ 1.69
NPAS3-206ENST00000548645 CNNM4Q6P4Q7 775 aa25.6■■□□□ 1.69
NPAS3-206ENST00000548645 COL5A2P05997 1499 aaPredicted RBP25.6■■□□□ 1.69
NPAS3-206ENST00000548645 PPP1R37O75864 691 aa25.6■■□□□ 1.69
NPAS3-206ENST00000548645 GLI1P08151 1106 aa25.6■■□□□ 1.69
NPAS3-206ENST00000548645 NR1D1P20393 614 aa25.6■■□□□ 1.69
NPAS3-206ENST00000548645 AMPD3Q01432 767 aa25.6■■□□□ 1.69
NPAS3-206ENST00000548645 DDR1Q08345 913 aa25.6■■□□□ 1.69
NPAS3-206ENST00000548645 COBLL1Q53SF7 1204 aa25.6■■□□□ 1.69
NPAS3-206ENST00000548645 KLHDC7AQ5VTJ3 777 aa25.6■■□□□ 1.69
NPAS3-206ENST00000548645 C1orf131Q8NDD1 294 aaKnown RBP25.6■■□□□ 1.69
NPAS3-206ENST00000548645 EPB41L5Q9HCM4 733 aa25.6■■□□□ 1.69
NPAS3-206ENST00000548645 MYO1FO00160 1098 aa25.59■■□□□ 1.69
NPAS3-206ENST00000548645 FCER1AP12319 257 aa25.59■■□□□ 1.69
NPAS3-206ENST00000548645 CCDC152Q4G0S7 254 aa25.59■■□□□ 1.69
NPAS3-206ENST00000548645 FAM47AQ5JRC9 791 aa25.59■■□□□ 1.69
NPAS3-206ENST00000548645 RRAGAQ7L523 313 aa25.59■■□□□ 1.69
NPAS3-206ENST00000548645 M0R2N6 131 aa25.59■■□□□ 1.69
NPAS3-206ENST00000548645 EPHB6O15197 1021 aa25.59■■□□□ 1.69
NPAS3-206ENST00000548645 HEXIM1O94992 359 aaKnown RBP25.59■■□□□ 1.69
NPAS3-206ENST00000548645 GUCY1A3Q02108 690 aa25.59■■□□□ 1.69
NPAS3-206ENST00000548645 CHRNDQ07001 517 aa25.59■■□□□ 1.69
NPAS3-206ENST00000548645 INF2Q27J81 1249 aa25.59■■□□□ 1.69
NPAS3-206ENST00000548645 IFT81Q8WYA0 676 aa25.59■■□□□ 1.69
NPAS3-206ENST00000548645 A1CFQ9NQ94 594 aaKnown RBP25.59■■□□□ 1.69
NPAS3-206ENST00000548645 SALL4Q9UJQ4 1053 aa25.59■■□□□ 1.69
NPAS3-206ENST00000548645 LRRC53A6NM62 1247 aa25.58■■□□□ 1.69
NPAS3-206ENST00000548645 PTGISQ16647 500 aa25.58■■□□□ 1.69
NPAS3-206ENST00000548645 ANKRD13CQ8N6S4 541 aa25.58■■□□□ 1.69
NPAS3-206ENST00000548645 ZNF473Q8WTR7 871 aaKnown RBP25.58■■□□□ 1.69
NPAS3-206ENST00000548645 PCDHA6Q9UN73 950 aa25.58■■□□□ 1.69
NPAS3-206ENST00000548645 PCDHA8Q9Y5H6 950 aa25.58■■□□□ 1.69
NPAS3-206ENST00000548645 GUCY2DQ02846 1103 aa25.58■■□□□ 1.69
NPAS3-206ENST00000548645 MAN2A1Q16706 1144 aa25.58■■□□□ 1.69
NPAS3-206ENST00000548645 RREB1Q92766 1687 aa25.58■■□□□ 1.68
NPAS3-206ENST00000548645 NKRFO15226 690 aaKnown RBP eCLIP25.57■■□□□ 1.68
NPAS3-206ENST00000548645 FAM153BP0C7A2 387 aa25.57■■□□□ 1.68
NPAS3-206ENST00000548645 FAM153CQ494X1 144 aa25.57■■□□□ 1.68
NPAS3-206ENST00000548645 CENPPQ6IPU0 288 aa25.57■■□□□ 1.68
NPAS3-206ENST00000548645 CADPS2Q86UW7 1296 aa25.57■■□□□ 1.68
NPAS3-206ENST00000548645 MTMR8Q96EF0 704 aa25.57■■□□□ 1.68
NPAS3-206ENST00000548645 MS4A14Q96JA4 679 aa25.57■■□□□ 1.68
NPAS3-206ENST00000548645 CXorf56Q9H5V9 222 aa25.57■■□□□ 1.68
NPAS3-206ENST00000548645 FAM153AQ9UHL3 310 aa25.57■■□□□ 1.68
NPAS3-206ENST00000548645 GGA2Q9UJY4 613 aa25.57■■□□□ 1.68
NPAS3-206ENST00000548645 FLT1P17948 1338 aa25.57■■□□□ 1.68
NPAS3-206ENST00000548645 RASSF7Q02833 373 aa25.57■■□□□ 1.68
NPAS3-206ENST00000548645 SUSD4Q5VX71 490 aa25.57■■□□□ 1.68
NPAS3-206ENST00000548645 GALNT17Q6IS24 598 aa25.57■■□□□ 1.68
NPAS3-206ENST00000548645 WHAMMQ8TF30 809 aa25.57■■□□□ 1.68
NPAS3-206ENST00000548645 ATP6V1G3Q96LB4 118 aa25.57■■□□□ 1.68
NPAS3-206ENST00000548645 SEMA6BQ9H3T3 888 aa25.57■■□□□ 1.68
NPAS3-206ENST00000548645 ZNF804BA4D1E1 1349 aa25.57■■□□□ 1.68
NPAS3-206ENST00000548645 SRRM3A6NNA2 597 aaPredicted RBP25.57■■□□□ 1.68
NPAS3-206ENST00000548645 HMGB1P1B2RPK0 211 aaPredicted RBP25.57■■□□□ 1.68
NPAS3-206ENST00000548645 ABCB11O95342 1321 aa25.57■■□□□ 1.68
NPAS3-206ENST00000548645 FGFR1OPO95684 399 aaKnown RBP25.57■■□□□ 1.68
NPAS3-206ENST00000548645 RPAINQ86UA6 219 aa25.57■■□□□ 1.68
NPAS3-206ENST00000548645 CICQ96RK0 1608 aaPredicted RBP25.57■■□□□ 1.68
NPAS3-206ENST00000548645 SSU72P8A0A1W2PR75 194 aa25.56■■□□□ 1.68
NPAS3-206ENST00000548645 ATP6V1AP38606 617 aa25.56■■□□□ 1.68
NPAS3-206ENST00000548645 MDH1P40925 334 aaKnown RBP25.56■■□□□ 1.68
NPAS3-206ENST00000548645 DAGLBQ8NCG7 672 aa25.56■■□□□ 1.68
NPAS3-206ENST00000548645 DCCP43146 1447 aa25.56■■□□□ 1.68
NPAS3-206ENST00000548645 TSPY2A6NKD2 308 aa25.56■■□□□ 1.68
NPAS3-206ENST00000548645 BUB1O43683 1085 aa25.56■■□□□ 1.68
NPAS3-206ENST00000548645 IL6STP40189 918 aaPredicted RBP25.56■■□□□ 1.68
NPAS3-206ENST00000548645 NLRP14Q86W24 1093 aa25.56■■□□□ 1.68
NPAS3-206ENST00000548645 CCT8L2Q96SF2 557 aa25.56■■□□□ 1.68
NPAS3-206ENST00000548645 TXNRD1Q16881 649 aa25.55■■□□□ 1.68
NPAS3-206ENST00000548645 ASTE1Q2TB18 679 aaPredicted RBP25.55■■□□□ 1.68
NPAS3-206ENST00000548645 KIAA0895Q8NCT3 520 aa25.55■■□□□ 1.68
NPAS3-206ENST00000548645 PIK3R5Q8WYR1 880 aa25.55■■□□□ 1.68
NPAS3-206ENST00000548645 EDEM3Q9BZQ6 932 aa25.55■■□□□ 1.68
NPAS3-206ENST00000548645 GRID2IPA4D2P6 1211 aa25.55■■□□□ 1.68
NPAS3-206ENST00000548645 GFPT1Q06210 699 aaPredicted RBP25.55■■□□□ 1.68
NPAS3-206ENST00000548645 RNF187Q5TA31 235 aaPredicted RBP25.55■■□□□ 1.68
NPAS3-206ENST00000548645 BAP1Q92560 729 aa25.55■■□□□ 1.68
NPAS3-206ENST00000548645 ESYT3A0FGR9 886 aa25.54■■□□□ 1.68
NPAS3-206ENST00000548645 PDXDC1Q6P996 788 aa25.54■■□□□ 1.68
NPAS3-206ENST00000548645 CACNA2D4Q7Z3S7 1137 aa25.54■■□□□ 1.68
NPAS3-206ENST00000548645 MYCBPAPQ8TBZ2 947 aa25.54■■□□□ 1.68
NPAS3-206ENST00000548645 LUC7LQ9NQ29 371 aaKnown RBP25.54■■□□□ 1.68
NPAS3-206ENST00000548645 STRCQ7RTU9 1775 aa25.54■■□□□ 1.68
NPAS3-206ENST00000548645 SLC1A4P43007 532 aa25.54■■□□□ 1.68
NPAS3-206ENST00000548645 GUCY2FP51841 1108 aa25.54■■□□□ 1.68
NPAS3-206ENST00000548645 PLCB4Q15147 1175 aa25.54■■□□□ 1.68
NPAS3-206ENST00000548645 SLC4A9Q96Q91 983 aa25.54■■□□□ 1.68
NPAS3-206ENST00000548645 CACNA1SQ13698 1873 aa25.54■■□□□ 1.68
NPAS3-206ENST00000548645 OR52Z1P0C646 297 aa25.53■■□□□ 1.68
NPAS3-206ENST00000548645 GYG1P46976 350 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms