RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 B4E1Z4 1266 aa5.81□□□□□ -1.48
PTCH1-216ENST00000548379 PPP1R11O60927 126 aaPredicted RBP5.81□□□□□ -1.48
PTCH1-216ENST00000548379 CKMP06732 381 aa5.81□□□□□ -1.48
PTCH1-216ENST00000548379 RBM10P98175 930 aaKnown RBP5.81□□□□□ -1.48
PTCH1-216ENST00000548379 LAPTM5Q13571 262 aa5.81□□□□□ -1.48
PTCH1-216ENST00000548379 KIZQ2M2Z5 673 aa5.81□□□□□ -1.48
PTCH1-216ENST00000548379 RALGPS1Q5JS13 557 aa5.81□□□□□ -1.48
PTCH1-216ENST00000548379 ZCCHC8Q6NZY4 707 aaKnown RBP5.81□□□□□ -1.48
PTCH1-216ENST00000548379 NLRP10Q86W26 655 aa5.81□□□□□ -1.48
PTCH1-216ENST00000548379 AFAP1L2Q8N4X5 818 aa5.81□□□□□ -1.48
PTCH1-216ENST00000548379 NAT16Q8N8M0 369 aa5.81□□□□□ -1.48
PTCH1-216ENST00000548379 JMJD8Q96S16 334 aa5.81□□□□□ -1.48
PTCH1-216ENST00000548379 FAM126AQ9BYI3 521 aaPredicted RBP5.81□□□□□ -1.48
PTCH1-216ENST00000548379 SP110Q9HB58 689 aa5.81□□□□□ -1.48
PTCH1-216ENST00000548379 ADGRE2Q9UHX3 823 aa5.81□□□□□ -1.48
PTCH1-216ENST00000548379 TMEM59LQ9UK28 342 aa5.81□□□□□ -1.48
PTCH1-216ENST00000548379 PCDHA8Q9Y5H6 950 aa5.81□□□□□ -1.48
PTCH1-216ENST00000548379 TIMM13Q9Y5L4 95 aaPredicted RBP5.81□□□□□ -1.48
PTCH1-216ENST00000548379 hCG_2014768A0A024R1R8 64 aa5.8□□□□□ -1.48
PTCH1-216ENST00000548379 OPA1O60313 960 aa5.8□□□□□ -1.48
PTCH1-216ENST00000548379 IBSPP21815 317 aaPredicted RBP5.8□□□□□ -1.48
PTCH1-216ENST00000548379 SOX5P35711 763 aa5.8□□□□□ -1.48
PTCH1-216ENST00000548379 GTF2A2P52657 109 aa5.8□□□□□ -1.48
PTCH1-216ENST00000548379 CORO7P57737 925 aa5.8□□□□□ -1.48
PTCH1-216ENST00000548379 RPL11P62913 178 aaKnown RBP5.8□□□□□ -1.48
PTCH1-216ENST00000548379 IGBP1P78318 339 aa5.8□□□□□ -1.48
PTCH1-216ENST00000548379 DUSP4Q13115 394 aa5.8□□□□□ -1.48
PTCH1-216ENST00000548379 LSAMPQ13449 338 aa5.8□□□□□ -1.48
PTCH1-216ENST00000548379 PCBP1Q15365 356 aaKnown RBP eCLIP5.8□□□□□ -1.48
PTCH1-216ENST00000548379 NR0B2Q15466 257 aa5.8□□□□□ -1.48
PTCH1-216ENST00000548379 CNNM4Q6P4Q7 775 aa5.8□□□□□ -1.48
PTCH1-216ENST00000548379 SLC23A3Q6PIS1 610 aa5.8□□□□□ -1.48
PTCH1-216ENST00000548379 MTDHQ86UE4 582 aaKnown RBP5.8□□□□□ -1.48
PTCH1-216ENST00000548379 AHI1Q8N157 1196 aa5.8□□□□□ -1.48
PTCH1-216ENST00000548379 ANKS4BQ8N8V4 417 aa5.8□□□□□ -1.48
PTCH1-216ENST00000548379 ASIC4Q96FT7 647 aa5.8□□□□□ -1.48
PTCH1-216ENST00000548379 MTA3Q9BTC8 594 aa5.8□□□□□ -1.48
PTCH1-216ENST00000548379 C19orf73Q9NVV2 129 aa5.8□□□□□ -1.48
PTCH1-216ENST00000548379 SLAMF8Q9P0V8 285 aa5.8□□□□□ -1.48
PTCH1-216ENST00000548379 PCDHA2Q9Y5H9 948 aa5.8□□□□□ -1.48
PTCH1-216ENST00000548379 PPM1GO15355 546 aaPredicted RBP5.79□□□□□ -1.48
PTCH1-216ENST00000548379 NPHS1O60500 1241 aa5.79□□□□□ -1.48
PTCH1-216ENST00000548379 EYA4O95677 639 aa5.79□□□□□ -1.48
PTCH1-216ENST00000548379 HMGB1P09429 215 aaKnown RBP5.79□□□□□ -1.48
PTCH1-216ENST00000548379 BCL6P41182 706 aa5.79□□□□□ -1.48
PTCH1-216ENST00000548379 PAK1Q13153 545 aa5.79□□□□□ -1.48
PTCH1-216ENST00000548379 SEPT7Q16181 437 aaKnown RBP5.79□□□□□ -1.48
PTCH1-216ENST00000548379 CDCA2Q69YH5 1023 aaPredicted RBP5.79□□□□□ -1.48
PTCH1-216ENST00000548379 KIF18BQ86Y91 864 aa5.79□□□□□ -1.48
PTCH1-216ENST00000548379 PDZD8Q8NEN9 1154 aa5.79□□□□□ -1.48
PTCH1-216ENST00000548379 PLEKHO2Q8TD55 490 aa5.79□□□□□ -1.48
PTCH1-216ENST00000548379 CELF4Q9BZC1 486 aaKnown RBP5.79□□□□□ -1.48
PTCH1-216ENST00000548379 PPARGC1AQ9UBK2 798 aaKnown RBP5.79□□□□□ -1.48
PTCH1-216ENST00000548379 H7BY64 318 aa5.78□□□□□ -1.48
PTCH1-216ENST00000548379 MYO1BO43795 1136 aa5.78□□□□□ -1.48
PTCH1-216ENST00000548379 NRDCO43847 1150 aa5.78□□□□□ -1.48
PTCH1-216ENST00000548379 ADAM23O75077 832 aa5.78□□□□□ -1.48
PTCH1-216ENST00000548379 ADAMTS4O75173 837 aa5.78□□□□□ -1.48
PTCH1-216ENST00000548379 EFEMP2O95967 443 aa5.78□□□□□ -1.48
PTCH1-216ENST00000548379 SOD2P04179 222 aa5.78□□□□□ -1.48
PTCH1-216ENST00000548379 JMJD7P0C870 316 aa5.78□□□□□ -1.48
PTCH1-216ENST00000548379 SSTR4P31391 388 aa5.78□□□□□ -1.48
PTCH1-216ENST00000548379 FLT3P36888 993 aa5.78□□□□□ -1.48
PTCH1-216ENST00000548379 MECP2P51608 486 aaKnown RBP5.78□□□□□ -1.48
PTCH1-216ENST00000548379 CHRNEQ04844 493 aa5.78□□□□□ -1.48
PTCH1-216ENST00000548379 DHCR24Q15392 516 aa5.78□□□□□ -1.48
PTCH1-216ENST00000548379 HSF5Q4G112 596 aaPredicted RBP5.78□□□□□ -1.48
PTCH1-216ENST00000548379 HABP4Q5JVS0 413 aaKnown RBP5.78□□□□□ -1.48
PTCH1-216ENST00000548379 PKN3Q6P5Z2 889 aa5.78□□□□□ -1.48
PTCH1-216ENST00000548379 STRA8Q7Z7C7 330 aa5.78□□□□□ -1.48
PTCH1-216ENST00000548379 JAMLQ86YT9 394 aa5.78□□□□□ -1.48
PTCH1-216ENST00000548379 UBR7Q8N806 425 aa5.78□□□□□ -1.48
PTCH1-216ENST00000548379 CCDC120Q96HB5 630 aa5.78□□□□□ -1.48
PTCH1-216ENST00000548379 ALG1Q9BT22 464 aa5.78□□□□□ -1.48
PTCH1-216ENST00000548379 IPPKQ9H8X2 491 aa5.78□□□□□ -1.48
PTCH1-216ENST00000548379 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.78□□□□□ -1.48
PTCH1-216ENST00000548379 ADAMTS6Q9UKP5 1117 aa5.78□□□□□ -1.48
PTCH1-216ENST00000548379 ACSL6Q9UKU0 697 aa5.78□□□□□ -1.48
PTCH1-216ENST00000548379 ATP8A1Q9Y2Q0 1164 aa5.78□□□□□ -1.48
PTCH1-216ENST00000548379 X6R8D5 127 aa5.78□□□□□ -1.48
PTCH1-216ENST00000548379 WTIPA6NIX2 430 aaPredicted RBP5.77□□□□□ -1.49
PTCH1-216ENST00000548379 FAM47E-STBD1D6RA91 191 aa5.77□□□□□ -1.49
PTCH1-216ENST00000548379 CBX4O00257 560 aa5.77□□□□□ -1.49
PTCH1-216ENST00000548379 USP2O75604 605 aaPredicted RBP5.77□□□□□ -1.49
PTCH1-216ENST00000548379 GLRX3O76003 335 aaKnown RBP5.77□□□□□ -1.49
PTCH1-216ENST00000548379 HPXP02790 462 aa5.77□□□□□ -1.49
PTCH1-216ENST00000548379 GRK2P25098 689 aa5.77□□□□□ -1.49
PTCH1-216ENST00000548379 GRK3P35626 688 aa5.77□□□□□ -1.49
PTCH1-216ENST00000548379 RTP1P59025 263 aa5.77□□□□□ -1.49
PTCH1-216ENST00000548379 MVKQ03426 396 aa5.77□□□□□ -1.49
PTCH1-216ENST00000548379 CFAP100Q494V2 611 aa5.77□□□□□ -1.49
PTCH1-216ENST00000548379 UBE2R2Q712K3 238 aaPredicted RBP5.77□□□□□ -1.49
PTCH1-216ENST00000548379 C16orf59Q7L2K0 433 aa5.77□□□□□ -1.49
PTCH1-216ENST00000548379 OVCH1Q7RTY7 1134 aa5.77□□□□□ -1.49
PTCH1-216ENST00000548379 DDX53Q86TM3 631 aaKnown RBP5.77□□□□□ -1.49
PTCH1-216ENST00000548379 FLCNQ8NFG4 579 aa5.77□□□□□ -1.49
PTCH1-216ENST00000548379 SYTL4Q96C24 671 aaPredicted RBP5.77□□□□□ -1.49
PTCH1-216ENST00000548379 PRDM7Q9NQW5 492 aa5.77□□□□□ -1.49
PTCH1-216ENST00000548379 MBNL3Q9NUK0 354 aaKnown RBP5.77□□□□□ -1.49
PTCH1-216ENST00000548379 SAMD15Q9P1V8 674 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms