RNA–Protein interactions for RNA: ENST00000548032.6

SEC23A-204, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2 BASIC

Gene SEC23A, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-204ENST00000548032 MICU3Q86XE3 530 aa16.79■□□□□ 0.28
SEC23A-204ENST00000548032 CMTR1Q8N1G2 835 aaKnown RBP16.79■□□□□ 0.28
SEC23A-204ENST00000548032 RRP36Q96EU6 259 aaKnown RBP16.79■□□□□ 0.28
SEC23A-204ENST00000548032 LBHD1Q9BQE6 289 aaPredicted RBP16.79■□□□□ 0.28
SEC23A-204ENST00000548032 MAF1Q9H063 256 aa16.79■□□□□ 0.28
SEC23A-204ENST00000548032 LRRC37A2A6NM11 1700 aa16.79■□□□□ 0.28
SEC23A-204ENST00000548032 ZEB2O60315 1214 aa16.78■□□□□ 0.28
SEC23A-204ENST00000548032 REC8O95072 547 aa16.78■□□□□ 0.28
SEC23A-204ENST00000548032 HSD17B4P51659 736 aa16.78■□□□□ 0.28
SEC23A-204ENST00000548032 PPP2R5BQ15173 497 aa16.78■□□□□ 0.28
SEC23A-204ENST00000548032 TSGA10IPQ3SY00 556 aa16.78■□□□□ 0.28
SEC23A-204ENST00000548032 DUSP28Q4G0W2 176 aa16.78■□□□□ 0.28
SEC23A-204ENST00000548032 C1orf53Q5VUE5 145 aa16.78■□□□□ 0.28
SEC23A-204ENST00000548032 CXCL17Q6UXB2 119 aa16.78■□□□□ 0.28
SEC23A-204ENST00000548032 SRBD1Q8N5C6 995 aaKnown RBP16.78■□□□□ 0.28
SEC23A-204ENST00000548032 OR6J1Q8NGC5 347 aa16.78■□□□□ 0.28
SEC23A-204ENST00000548032 LZTS2Q9BRK4 669 aa16.78■□□□□ 0.28
SEC23A-204ENST00000548032 SPZ1Q9BXG8 430 aa16.78■□□□□ 0.28
SEC23A-204ENST00000548032 UBE2OQ9C0C9 1292 aaKnown RBP16.78■□□□□ 0.28
SEC23A-204ENST00000548032 SEC63Q9UGP8 760 aaKnown RBP16.78■□□□□ 0.28
SEC23A-204ENST00000548032 RBM47A0AV96 593 aaKnown RBP16.77■□□□□ 0.28
SEC23A-204ENST00000548032 GCOM1H8Y6P7 765 aaPredicted RBP16.77■□□□□ 0.28
SEC23A-204ENST00000548032 POLR2MP0CAP2 368 aa16.77■□□□□ 0.28
SEC23A-204ENST00000548032 NKX3-2P78367 333 aa16.77■□□□□ 0.28
SEC23A-204ENST00000548032 FGD1P98174 961 aa16.77■□□□□ 0.28
SEC23A-204ENST00000548032 EXOSC10Q01780 885 aaKnown RBP16.77■□□□□ 0.28
SEC23A-204ENST00000548032 SEPT14Q6ZU15 432 aa16.77■□□□□ 0.28
SEC23A-204ENST00000548032 SH3RF1Q7Z6J0 888 aa16.77■□□□□ 0.28
SEC23A-204ENST00000548032 SGMS1Q86VZ5 419 aa16.77■□□□□ 0.28
SEC23A-204ENST00000548032 FCHSD1Q86WN1 690 aa16.77■□□□□ 0.28
SEC23A-204ENST00000548032 CCDC82Q8N4S0 544 aa16.77■□□□□ 0.28
SEC23A-204ENST00000548032 SCFD2Q8WU76 684 aa16.77■□□□□ 0.28
SEC23A-204ENST00000548032 JAKMIP1Q96N16 626 aaKnown RBP16.77■□□□□ 0.28
SEC23A-204ENST00000548032 PDLIM7Q9NR12 457 aa16.77■□□□□ 0.28
SEC23A-204ENST00000548032 PXMP2Q9NR77 195 aa16.77■□□□□ 0.28
SEC23A-204ENST00000548032 NAP1L2Q9ULW6 460 aaPredicted RBP16.77■□□□□ 0.28
SEC23A-204ENST00000548032 Q9Y3F1 56 aa16.77■□□□□ 0.28
SEC23A-204ENST00000548032 ELP1O95163 1332 aa16.76■□□□□ 0.27
SEC23A-204ENST00000548032 hCG_1642624A0A1W2PR95 340 aa16.76■□□□□ 0.27
SEC23A-204ENST00000548032 HMGB1P09429 215 aaKnown RBP16.76■□□□□ 0.27
SEC23A-204ENST00000548032 CLTBP09497 229 aa16.76■□□□□ 0.27
SEC23A-204ENST00000548032 TXNP10599 105 aaKnown RBP16.76■□□□□ 0.27
SEC23A-204ENST00000548032 CPA1P15085 419 aa16.76■□□□□ 0.27
SEC23A-204ENST00000548032 HSPA4P34932 840 aa16.76■□□□□ 0.27
SEC23A-204ENST00000548032 TTLL4Q14679 1199 aa16.76■□□□□ 0.27
SEC23A-204ENST00000548032 STXBP2Q15833 593 aa16.76■□□□□ 0.27
SEC23A-204ENST00000548032 FANCBQ8NB91 859 aa16.76■□□□□ 0.27
SEC23A-204ENST00000548032 COPS5Q92905 334 aa16.76■□□□□ 0.27
SEC23A-204ENST00000548032 IWS1Q96ST2 819 aa16.76■□□□□ 0.27
SEC23A-204ENST00000548032 SNX14Q9Y5W7 946 aa16.76■□□□□ 0.27
SEC23A-204ENST00000548032 A0A0U1RQG5 324 aaPredicted RBP16.75■□□□□ 0.27
SEC23A-204ENST00000548032 TRIM43BA6NCK2 446 aa16.75■□□□□ 0.27
SEC23A-204ENST00000548032 DCDC2CA8MYV0 355 aa16.75■□□□□ 0.27
SEC23A-204ENST00000548032 NR3C2P08235 984 aa16.75■□□□□ 0.27
SEC23A-204ENST00000548032 MYL3P08590 195 aa16.75■□□□□ 0.27
SEC23A-204ENST00000548032 MYCLP12524 364 aaPredicted RBP16.75■□□□□ 0.27
SEC23A-204ENST00000548032 SMARCA1P28370 1054 aa16.75■□□□□ 0.27
SEC23A-204ENST00000548032 GHRHRQ02643 423 aa16.75■□□□□ 0.27
SEC23A-204ENST00000548032 APOA5Q6Q788 366 aa16.75■□□□□ 0.27
SEC23A-204ENST00000548032 TMTC3Q6ZXV5 915 aa16.75■□□□□ 0.27
SEC23A-204ENST00000548032 KCNB2Q92953 911 aa16.75■□□□□ 0.27
SEC23A-204ENST00000548032 TRIM43Q96BQ3 446 aaPredicted RBP16.75■□□□□ 0.27
SEC23A-204ENST00000548032 TMEM39AQ9NV64 488 aa16.75■□□□□ 0.27
SEC23A-204ENST00000548032 MAP3K20Q9NYL2 800 aaKnown RBP16.75■□□□□ 0.27
SEC23A-204ENST00000548032 BRPF3Q9ULD4 1205 aa16.75■□□□□ 0.27
SEC23A-204ENST00000548032 KLF18A0A0U1RQI7 1052 aa16.74■□□□□ 0.27
SEC23A-204ENST00000548032 ARVCFO00192 962 aa16.74■□□□□ 0.27
SEC23A-204ENST00000548032 NKRFO15226 690 aaKnown RBP eCLIP16.74■□□□□ 0.275e-14■□□□□ 8.7
SEC23A-204ENST00000548032 ZBTB43O43298 467 aa16.74■□□□□ 0.27
SEC23A-204ENST00000548032 ARIH2O95376 493 aa16.74■□□□□ 0.27
SEC23A-204ENST00000548032 CPT1AP50416 773 aa16.74■□□□□ 0.27
SEC23A-204ENST00000548032 PSMC6P62333 389 aa16.74■□□□□ 0.27
SEC23A-204ENST00000548032 RTN1Q16799 776 aa16.74■□□□□ 0.27
SEC23A-204ENST00000548032 LRIT3Q3SXY7 679 aa16.74■□□□□ 0.27
SEC23A-204ENST00000548032 BLOC1S2Q6QNY1 142 aa16.74■□□□□ 0.27
SEC23A-204ENST00000548032 TDHQ8IZJ6 230 aa16.74■□□□□ 0.27
SEC23A-204ENST00000548032 SAMD3Q8N6K7 520 aa16.74■□□□□ 0.27
SEC23A-204ENST00000548032 BADQ92934 168 aa16.74■□□□□ 0.27
SEC23A-204ENST00000548032 PDCD2LQ9BRP1 358 aa16.74■□□□□ 0.27
SEC23A-204ENST00000548032 MYH6P13533 1939 aa16.73■□□□□ 0.27
SEC23A-204ENST00000548032 GOLGA8AA7E2F4 631 aa16.73■□□□□ 0.27
SEC23A-204ENST00000548032 GOLGA8BA8MQT2 603 aa16.73■□□□□ 0.27
SEC23A-204ENST00000548032 EIF3JO75822 258 aaKnown RBP16.73■□□□□ 0.27
SEC23A-204ENST00000548032 CABYRO75952 493 aa16.73■□□□□ 0.27
SEC23A-204ENST00000548032 FAAP100Q0VG06 881 aa16.73■□□□□ 0.27
SEC23A-204ENST00000548032 LY6KQ17RY6 165 aa16.73■□□□□ 0.27
SEC23A-204ENST00000548032 BRDTQ58F21 947 aaPredicted RBP16.73■□□□□ 0.27
SEC23A-204ENST00000548032 GPR153Q6NV75 609 aa16.73■□□□□ 0.27
SEC23A-204ENST00000548032 ANKRD33Q7Z3H0 272 aa16.73■□□□□ 0.27
SEC23A-204ENST00000548032 SLC17A8Q8NDX2 589 aa16.73■□□□□ 0.27
SEC23A-204ENST00000548032 IL31RAQ8NI17 732 aa16.73■□□□□ 0.27
SEC23A-204ENST00000548032 CUL5Q93034 780 aa16.73■□□□□ 0.27
SEC23A-204ENST00000548032 ZFP91Q96JP5 570 aaPredicted RBP16.73■□□□□ 0.27
SEC23A-204ENST00000548032 TOX2Q96NM4 488 aa16.73■□□□□ 0.27
SEC23A-204ENST00000548032 RBM28Q9NW13 759 aaKnown RBP16.73■□□□□ 0.27
SEC23A-204ENST00000548032 DNAH12Q6ZR08 3092 aa16.73■□□□□ 0.27
SEC23A-204ENST00000548032 BAZ2BQ9UIF8 2168 aaKnown RBP16.72■□□□□ 0.27
SEC23A-204ENST00000548032 MROH7Q68CQ1 1323 aa16.72■□□□□ 0.27
SEC23A-204ENST00000548032 RAG1P15918 1043 aa16.72■□□□□ 0.27
SEC23A-204ENST00000548032 CDK7P50613 346 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms