RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 LAMA4Q16363 1823 aa15.57■□□□□ 0.08
CPSF6-204ENST00000547486 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.56■□□□□ 0.08
CPSF6-204ENST00000547486 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.56■□□□□ 0.08
CPSF6-204ENST00000547486 A6NJR5 290 aa15.56■□□□□ 0.08
CPSF6-204ENST00000547486 E7EWF7 191 aa15.56■□□□□ 0.08
CPSF6-204ENST00000547486 TXNP10599 105 aaKnown RBP15.56■□□□□ 0.08
CPSF6-204ENST00000547486 CPT1AP50416 773 aa15.56■□□□□ 0.08
CPSF6-204ENST00000547486 CCL23P55773 120 aa15.56■□□□□ 0.08
CPSF6-204ENST00000547486 PPP2R5BQ15173 497 aa15.56■□□□□ 0.08
CPSF6-204ENST00000547486 CCDC62Q6P9F0 684 aa15.56■□□□□ 0.08
CPSF6-204ENST00000547486 MCF2L2Q86YR7 1114 aa15.56■□□□□ 0.08
CPSF6-204ENST00000547486 NSUN6Q8TEA1 469 aaKnown RBP15.56■□□□□ 0.08
CPSF6-204ENST00000547486 VWCEQ96DN2 955 aa15.56■□□□□ 0.08
CPSF6-204ENST00000547486 RMDN3Q96TC7 470 aa15.56■□□□□ 0.08
CPSF6-204ENST00000547486 MPHOSPH6Q99547 160 aaKnown RBP15.56■□□□□ 0.08
CPSF6-204ENST00000547486 SEZ6LQ9BYH1 1024 aa15.56■□□□□ 0.08
CPSF6-204ENST00000547486 MAF1Q9H063 256 aa15.56■□□□□ 0.08
CPSF6-204ENST00000547486 TRMT13Q9NUP7 481 aaKnown RBP15.56■□□□□ 0.08
CPSF6-204ENST00000547486 POLR3EQ9NVU0 708 aa15.56■□□□□ 0.08
CPSF6-204ENST00000547486 MRPL11Q9Y3B7 192 aaKnown RBP15.56■□□□□ 0.08
CPSF6-204ENST00000547486 U3KPZ7 1027 aaPredicted RBP15.56■□□□□ 0.08
CPSF6-204ENST00000547486 EYSQ5T1H1 3165 aa15.55■□□□□ 0.08
CPSF6-204ENST00000547486 GRXCR1A8MXD5 290 aa15.55■□□□□ 0.08
CPSF6-204ENST00000547486 B4DLN1 442 aa15.55■□□□□ 0.08
CPSF6-204ENST00000547486 IFIT3O14879 490 aaKnown RBP15.55■□□□□ 0.08
CPSF6-204ENST00000547486 NKRFO15226 690 aaKnown RBP eCLIP15.55■□□□□ 0.08
CPSF6-204ENST00000547486 MRPL12P52815 198 aaKnown RBP15.55■□□□□ 0.08
CPSF6-204ENST00000547486 TRDNQ13061 729 aa15.55■□□□□ 0.08
CPSF6-204ENST00000547486 LY6KQ17RY6 165 aa15.55■□□□□ 0.08
CPSF6-204ENST00000547486 SEPT14Q6ZU15 432 aa15.55■□□□□ 0.08
CPSF6-204ENST00000547486 MAP4K1Q92918 833 aa15.55■□□□□ 0.08
CPSF6-204ENST00000547486 MTG1Q9BT17 334 aaPredicted RBP15.55■□□□□ 0.08
CPSF6-204ENST00000547486 AMNQ9BXJ7 453 aa15.55■□□□□ 0.08
CPSF6-204ENST00000547486 WNT8AQ9H1J5 351 aa15.55■□□□□ 0.08
CPSF6-204ENST00000547486 IL23AQ9NPF7 189 aa15.55■□□□□ 0.08
CPSF6-204ENST00000547486 CDH23Q9H251 3354 aa15.55■□□□□ 0.08
CPSF6-204ENST00000547486 DLL1O00548 723 aa15.54■□□□□ 0.08
CPSF6-204ENST00000547486 CFBP00751 764 aa15.54■□□□□ 0.08
CPSF6-204ENST00000547486 CYP2C9P11712 490 aa15.54■□□□□ 0.08
CPSF6-204ENST00000547486 PBX2P40425 430 aa15.54■□□□□ 0.08
CPSF6-204ENST00000547486 TTLL4Q14679 1199 aa15.54■□□□□ 0.08
CPSF6-204ENST00000547486 GRM4Q14833 912 aa15.54■□□□□ 0.08
CPSF6-204ENST00000547486 NBPF20Q3BBV1 942 aa15.54■□□□□ 0.08
CPSF6-204ENST00000547486 MYLIPQ8WY64 445 aa15.54■□□□□ 0.08
CPSF6-204ENST00000547486 IWS1Q96ST2 819 aa15.54■□□□□ 0.08
CPSF6-204ENST00000547486 GPHNQ9NQX3 736 aaPredicted RBP15.54■□□□□ 0.08
CPSF6-204ENST00000547486 CXXC1Q9P0U4 656 aaPredicted RBP15.54■□□□□ 0.08
CPSF6-204ENST00000547486 ZBTB5O15062 677 aa15.53■□□□□ 0.08
CPSF6-204ENST00000547486 CYTH3O43739 400 aa15.53■□□□□ 0.08
CPSF6-204ENST00000547486 FGBP02675 491 aa15.53■□□□□ 0.08
CPSF6-204ENST00000547486 EIF2AK2P19525 551 aaKnown RBP15.53■□□□□ 0.08
CPSF6-204ENST00000547486 DNAJB2P25686 324 aa15.53■□□□□ 0.08
CPSF6-204ENST00000547486 HSD17B4P51659 736 aa15.53■□□□□ 0.08
CPSF6-204ENST00000547486 ANTXR2P58335 489 aa15.53■□□□□ 0.08
CPSF6-204ENST00000547486 GHRHRQ02643 423 aa15.53■□□□□ 0.08
CPSF6-204ENST00000547486 TROAPQ12815 778 aa15.53■□□□□ 0.08
CPSF6-204ENST00000547486 GRIN2CQ14957 1233 aa15.53■□□□□ 0.08
CPSF6-204ENST00000547486 STXBP2Q15833 593 aa15.53■□□□□ 0.08
CPSF6-204ENST00000547486 ARHGEF16Q5VV41 709 aa15.53■□□□□ 0.08
CPSF6-204ENST00000547486 NCOA7Q8NI08 942 aa15.53■□□□□ 0.08
CPSF6-204ENST00000547486 IGDCC4Q8TDY8 1250 aa15.53■□□□□ 0.08
CPSF6-204ENST00000547486 AFG1LQ8WV93 481 aa15.53■□□□□ 0.08
CPSF6-204ENST00000547486 HERVK_113Q902F9 699 aa15.53■□□□□ 0.08
CPSF6-204ENST00000547486 SCLYQ96I15 445 aa15.53■□□□□ 0.08
CPSF6-204ENST00000547486 PIGSQ96S52 555 aa15.53■□□□□ 0.08
CPSF6-204ENST00000547486 RIOX1Q9H6W3 641 aa15.53■□□□□ 0.08
CPSF6-204ENST00000547486 PXMP2Q9NR77 195 aa15.53■□□□□ 0.08
CPSF6-204ENST00000547486 PCDHA1Q9Y5I3 950 aa15.53■□□□□ 0.08
CPSF6-204ENST00000547486 UNC80Q8N2C7 3258 aa15.52■□□□□ 0.08
CPSF6-204ENST00000547486 KPNA6O60684 536 aa15.52■□□□□ 0.08
CPSF6-204ENST00000547486 EIF3JO75822 258 aaKnown RBP15.52■□□□□ 0.08
CPSF6-204ENST00000547486 NR3C2P08235 984 aa15.52■□□□□ 0.08
CPSF6-204ENST00000547486 ARHGAP1Q07960 439 aa15.52■□□□□ 0.08
CPSF6-204ENST00000547486 COL9A3Q14050 684 aaPredicted RBP15.52■□□□□ 0.08
CPSF6-204ENST00000547486 WTAPQ15007 396 aa15.52■□□□□ 0.08
CPSF6-204ENST00000547486 BRDTQ58F21 947 aaPredicted RBP15.52■□□□□ 0.08
CPSF6-204ENST00000547486 PSRC1Q6PGN9 363 aaPredicted RBP15.52■□□□□ 0.08
CPSF6-204ENST00000547486 OTOP2Q7RTS6 562 aa15.52■□□□□ 0.08
CPSF6-204ENST00000547486 SKAP1Q86WV1 359 aa15.52■□□□□ 0.08
CPSF6-204ENST00000547486 MB21D2Q8IYB1 491 aaPredicted RBP15.52■□□□□ 0.08
CPSF6-204ENST00000547486 PBX4Q9BYU1 374 aa15.52■□□□□ 0.08
CPSF6-204ENST00000547486 DDX41Q9UJV9 622 aaKnown RBP15.52■□□□□ 0.08
CPSF6-204ENST00000547486 RBM8AQ9Y5S9 174 aaKnown RBP15.52■□□□□ 0.08
CPSF6-204ENST00000547486 RGS20O76081 388 aa15.51■□□□□ 0.07
CPSF6-204ENST00000547486 SUPT20HL2P0C7V6 817 aa15.51■□□□□ 0.07
CPSF6-204ENST00000547486 HOXA13P31271 388 aaPredicted RBP15.51■□□□□ 0.07
CPSF6-204ENST00000547486 FAM47CQ5HY64 1035 aa15.51■□□□□ 0.07
CPSF6-204ENST00000547486 NFRKBQ6P4R8 1299 aa15.51■□□□□ 0.07
CPSF6-204ENST00000547486 RALYLQ86SE5 291 aaKnown RBP15.51■□□□□ 0.07
CPSF6-204ENST00000547486 HOMER1Q86YM7 354 aa15.51■□□□□ 0.07
CPSF6-204ENST00000547486 TIFAQ96CG3 184 aa15.51■□□□□ 0.07
CPSF6-204ENST00000547486 ZNF576Q9H609 170 aa15.51■□□□□ 0.07
CPSF6-204ENST00000547486 TMEM265A0A087WTH1 108 aa15.5■□□□□ 0.07
CPSF6-204ENST00000547486 ERICH2A1L162 156 aa15.5■□□□□ 0.07
CPSF6-204ENST00000547486 GH1P01241 217 aa15.5■□□□□ 0.07
CPSF6-204ENST00000547486 MMP3P08254 477 aa15.5■□□□□ 0.07
CPSF6-204ENST00000547486 CHMP4BP1P59074 171 aa15.5■□□□□ 0.07
CPSF6-204ENST00000547486 TMEM67Q5HYA8 995 aa15.5■□□□□ 0.07
CPSF6-204ENST00000547486 IL31RAQ8NI17 732 aa15.5■□□□□ 0.07
CPSF6-204ENST00000547486 KAT2BQ92831 832 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms