RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 SRGNP10124 158 aa11.85□□□□□ -0.51
NPAS3-205ENST00000547068 KLK7P49862 253 aa11.85□□□□□ -0.51
NPAS3-205ENST00000547068 ZKSCAN8Q15776 578 aaPredicted RBP11.85□□□□□ -0.51
NPAS3-205ENST00000547068 C11orf91Q3C1V1 193 aa11.85□□□□□ -0.51
NPAS3-205ENST00000547068 PDXDC2PQ6P474 469 aa11.85□□□□□ -0.51
NPAS3-205ENST00000547068 RGPD4Q7Z3J3 1758 aa11.85□□□□□ -0.51
NPAS3-205ENST00000547068 DEFB132Q7Z7B7 95 aa11.85□□□□□ -0.51
NPAS3-205ENST00000547068 RETREG2Q8NC44 543 aa11.85□□□□□ -0.51
NPAS3-205ENST00000547068 RSRC1Q96IZ7 334 aaKnown RBP11.85□□□□□ -0.51
NPAS3-205ENST00000547068 CWC25Q9NXE8 425 aaPredicted RBP11.85□□□□□ -0.51
NPAS3-205ENST00000547068 TFCP2L1Q9NZI6 479 aa11.85□□□□□ -0.51
NPAS3-205ENST00000547068 BCCIPQ9P287 314 aaKnown RBP eCLIP11.85□□□□□ -0.51
NPAS3-205ENST00000547068 MYH13Q9UKX3 1938 aa11.84□□□□□ -0.51
NPAS3-205ENST00000547068 ZSCAN5CA6NGD5 496 aaPredicted RBP11.84□□□□□ -0.51
NPAS3-205ENST00000547068 ZPR1O75312 459 aa11.84□□□□□ -0.51
NPAS3-205ENST00000547068 XBP1P17861 261 aa11.84□□□□□ -0.51
NPAS3-205ENST00000547068 RFC4P35249 363 aa11.84□□□□□ -0.51
NPAS3-205ENST00000547068 SCTRP47872 440 aa11.84□□□□□ -0.51
NPAS3-205ENST00000547068 SARNPP82979 210 aaKnown RBP11.84□□□□□ -0.51
NPAS3-205ENST00000547068 CTDSPL2Q05D32 466 aa11.84□□□□□ -0.51
NPAS3-205ENST00000547068 C3orf20Q8ND61 904 aa11.84□□□□□ -0.51
NPAS3-205ENST00000547068 NUP133Q8WUM0 1156 aa11.84□□□□□ -0.51
NPAS3-205ENST00000547068 TRIM47Q96LD4 638 aa11.84□□□□□ -0.51
NPAS3-205ENST00000547068 ZKSCAN3Q9BRR0 538 aa11.84□□□□□ -0.51
NPAS3-205ENST00000547068 THAP9Q9H5L6 903 aa11.84□□□□□ -0.51
NPAS3-205ENST00000547068 RBM28Q9NW13 759 aaKnown RBP11.84□□□□□ -0.51
NPAS3-205ENST00000547068 PCDHA13Q9Y5I0 950 aa11.84□□□□□ -0.51
NPAS3-205ENST00000547068 NID2Q14112 1375 aa11.84□□□□□ -0.51
NPAS3-205ENST00000547068 WNT7AO00755 349 aa11.84□□□□□ -0.51
NPAS3-205ENST00000547068 OPLAHO14841 1288 aa11.84□□□□□ -0.51
NPAS3-205ENST00000547068 NCK2O43639 380 aa11.84□□□□□ -0.51
NPAS3-205ENST00000547068 ATP2C2O75185 946 aa11.84□□□□□ -0.51
NPAS3-205ENST00000547068 ADRA2BP18089 450 aa11.84□□□□□ -0.51
NPAS3-205ENST00000547068 KRT2P35908 639 aa11.84□□□□□ -0.51
NPAS3-205ENST00000547068 PMS1P54277 932 aaKnown RBP11.84□□□□□ -0.51
NPAS3-205ENST00000547068 SLC8A3P57103 927 aa11.84□□□□□ -0.51
NPAS3-205ENST00000547068 PPARDQ03181 441 aa11.84□□□□□ -0.51
NPAS3-205ENST00000547068 TBC1D8BQ0IIM8 1120 aa11.84□□□□□ -0.51
NPAS3-205ENST00000547068 WTAPQ15007 396 aa11.84□□□□□ -0.51
NPAS3-205ENST00000547068 CFAP221Q4G0U5 840 aa11.84□□□□□ -0.51
NPAS3-205ENST00000547068 ADSSL1Q8N142 457 aa11.84□□□□□ -0.51
NPAS3-205ENST00000547068 PYM1Q9BRP8 204 aaKnown RBP11.84□□□□□ -0.51
NPAS3-205ENST00000547068 PLAAQ9Y263 795 aa11.84□□□□□ -0.51
NPAS3-205ENST00000547068 ZNF652Q9Y2D9 606 aa11.84□□□□□ -0.51
NPAS3-205ENST00000547068 RREB1Q92766 1687 aa11.83□□□□□ -0.51
NPAS3-205ENST00000547068 RASSF10A6NK89 507 aa11.83□□□□□ -0.52
NPAS3-205ENST00000547068 SKAP2O75563 359 aaPredicted RBP11.83□□□□□ -0.52
NPAS3-205ENST00000547068 IDH1O75874 414 aaKnown RBP11.83□□□□□ -0.52
NPAS3-205ENST00000547068 PLEKP08567 350 aaPredicted RBP11.83□□□□□ -0.52
NPAS3-205ENST00000547068 CCNHP51946 323 aaPredicted RBP11.83□□□□□ -0.52
NPAS3-205ENST00000547068 CDK17Q00537 523 aa11.83□□□□□ -0.52
NPAS3-205ENST00000547068 PTGDRQ13258 359 aa11.83□□□□□ -0.52
NPAS3-205ENST00000547068 XRCC4Q13426 336 aa11.83□□□□□ -0.52
NPAS3-205ENST00000547068 BIRC2Q13490 618 aa11.83□□□□□ -0.52
NPAS3-205ENST00000547068 NBPF9Q3BBW0 867 aa11.83□□□□□ -0.52
NPAS3-205ENST00000547068 RRP12Q5JTH9 1297 aaKnown RBP11.83□□□□□ -0.52
NPAS3-205ENST00000547068 GIGYF2Q6Y7W6 1299 aaKnown RBP11.83□□□□□ -0.52
NPAS3-205ENST00000547068 RASSF8Q8NHQ8 419 aa11.83□□□□□ -0.52
NPAS3-205ENST00000547068 WHAMMQ8TF30 809 aa11.83□□□□□ -0.52
NPAS3-205ENST00000547068 SEC16BQ96JE7 1060 aa11.83□□□□□ -0.52
NPAS3-205ENST00000547068 TUBGCP2Q9BSJ2 902 aa11.83□□□□□ -0.52
NPAS3-205ENST00000547068 LEMD3Q9Y2U8 911 aa11.83□□□□□ -0.52
NPAS3-205ENST00000547068 ABCC12Q96J65 1359 aa11.83□□□□□ -0.52
NPAS3-205ENST00000547068 ERICH2A1L162 156 aa11.83□□□□□ -0.52
NPAS3-205ENST00000547068 TRAPPC3O43617 180 aa11.83□□□□□ -0.52
NPAS3-205ENST00000547068 MGRN1O60291 552 aa11.83□□□□□ -0.52
NPAS3-205ENST00000547068 QPCTQ16769 361 aa11.83□□□□□ -0.52
NPAS3-205ENST00000547068 CCDC57Q2TAC2 916 aa11.83□□□□□ -0.52
NPAS3-205ENST00000547068 TYW1BQ6NUM6 668 aa11.83□□□□□ -0.52
NPAS3-205ENST00000547068 CACNA2D3Q8IZS8 1091 aa11.83□□□□□ -0.52
NPAS3-205ENST00000547068 FANCBQ8NB91 859 aa11.83□□□□□ -0.52
NPAS3-205ENST00000547068 RNF217Q8TC41 542 aa11.83□□□□□ -0.52
NPAS3-205ENST00000547068 ARHGEF1Q92888 912 aaKnown RBP11.83□□□□□ -0.52
NPAS3-205ENST00000547068 TBC1D31Q96DN5 1066 aa11.83□□□□□ -0.52
NPAS3-205ENST00000547068 MS4A14Q96JA4 679 aa11.83□□□□□ -0.52
NPAS3-205ENST00000547068 UBAC1Q9BSL1 405 aa11.83□□□□□ -0.52
NPAS3-205ENST00000547068 CNNM2Q9H8M5 875 aa11.83□□□□□ -0.52
NPAS3-205ENST00000547068 TMBIM4Q9HC24 238 aa11.83□□□□□ -0.52
NPAS3-205ENST00000547068 RIPOR2Q9Y4F9 1068 aa11.83□□□□□ -0.52
NPAS3-205ENST00000547068 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.82□□□□□ -0.52
NPAS3-205ENST00000547068 GCOM1H8Y6P7 765 aaPredicted RBP11.82□□□□□ -0.52
NPAS3-205ENST00000547068 MYZAPP0CAP1 466 aa11.82□□□□□ -0.52
NPAS3-205ENST00000547068 MCAMP43121 646 aa11.82□□□□□ -0.52
NPAS3-205ENST00000547068 TCIRG1Q13488 830 aa11.82□□□□□ -0.52
NPAS3-205ENST00000547068 LACTB2Q53H82 288 aaPredicted RBP11.82□□□□□ -0.52
NPAS3-205ENST00000547068 TTC38Q5R3I4 469 aa11.82□□□□□ -0.52
NPAS3-205ENST00000547068 MSL1Q68DK7 614 aa11.82□□□□□ -0.52
NPAS3-205ENST00000547068 FLAD1Q8NFF5 587 aa11.82□□□□□ -0.52
NPAS3-205ENST00000547068 UPF1Q92900 1129 aaKnown RBP eCLIP11.82□□□□□ -0.52
NPAS3-205ENST00000547068 KRT23Q9C075 422 aa11.82□□□□□ -0.52
NPAS3-205ENST00000547068 STK32BQ9NY57 414 aa11.82□□□□□ -0.52
NPAS3-205ENST00000547068 NARFQ9UHQ1 456 aa11.82□□□□□ -0.52
NPAS3-205ENST00000547068 ZNF532Q9HCE3 1301 aa11.82□□□□□ -0.52
NPAS3-205ENST00000547068 GCKP35557 465 aa11.82□□□□□ -0.52
NPAS3-205ENST00000547068 ATP2C1P98194 919 aaPredicted RBP11.82□□□□□ -0.52
NPAS3-205ENST00000547068 GRIK3Q13003 919 aa11.82□□□□□ -0.52
NPAS3-205ENST00000547068 RCSD1Q6JBY9 416 aa11.82□□□□□ -0.52
NPAS3-205ENST00000547068 CLEC4GQ6UXB4 293 aa11.82□□□□□ -0.52
NPAS3-205ENST00000547068 MFSD6Q6ZSS7 791 aa11.82□□□□□ -0.52
NPAS3-205ENST00000547068 TAX1BP1Q86VP1 789 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms