RNA–Protein interactions for RNA: ENST00000546774.1

CALCOCO1-205, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-205ENST00000546774 AMNQ9BXJ7 453 aa9.57□□□□□ -0.88
CALCOCO1-205ENST00000546774 WDR11Q9BZH6 1224 aa9.57□□□□□ -0.88
CALCOCO1-205ENST00000546774 GPHNQ9NQX3 736 aaPredicted RBP9.57□□□□□ -0.88
CALCOCO1-205ENST00000546774 PDLIM7Q9NR12 457 aa9.57□□□□□ -0.88
CALCOCO1-205ENST00000546774 MRPL11Q9Y3B7 192 aaKnown RBP9.57□□□□□ -0.88
CALCOCO1-205ENST00000546774 Q9Y3F1 56 aa9.57□□□□□ -0.88
CALCOCO1-205ENST00000546774 LAMA3Q16787 3333 aa9.56□□□□□ -0.88
CALCOCO1-205ENST00000546774 RBM47A0AV96 593 aaKnown RBP9.56□□□□□ -0.88
CALCOCO1-205ENST00000546774 DCDC2CA8MYV0 355 aa9.56□□□□□ -0.88
CALCOCO1-205ENST00000546774 ZBTB5O15062 677 aa9.56□□□□□ -0.88
CALCOCO1-205ENST00000546774 ZEB2O60315 1214 aa9.56□□□□□ -0.88
CALCOCO1-205ENST00000546774 PPP1R11O60927 126 aaPredicted RBP9.56□□□□□ -0.88
CALCOCO1-205ENST00000546774 CFBP00751 764 aa9.56□□□□□ -0.88
CALCOCO1-205ENST00000546774 EDNRBP24530 442 aa9.56□□□□□ -0.88
CALCOCO1-205ENST00000546774 ITGB8P26012 769 aa9.56□□□□□ -0.88
CALCOCO1-205ENST00000546774 MCM5P33992 734 aa9.56□□□□□ -0.88
CALCOCO1-205ENST00000546774 CDK7P50613 346 aa9.56□□□□□ -0.88
CALCOCO1-205ENST00000546774 FAAP100Q0VG06 881 aa9.56□□□□□ -0.88
CALCOCO1-205ENST00000546774 COL9A3Q14050 684 aaPredicted RBP9.56□□□□□ -0.88
CALCOCO1-205ENST00000546774 FSCN1Q16658 493 aaKnown RBP9.56□□□□□ -0.88
CALCOCO1-205ENST00000546774 SLC35G1Q2M3R5 365 aa9.56□□□□□ -0.88
CALCOCO1-205ENST00000546774 CASC1Q6TDU7 716 aa9.56□□□□□ -0.88
CALCOCO1-205ENST00000546774 CXCL17Q6UXB2 119 aa9.56□□□□□ -0.88
CALCOCO1-205ENST00000546774 HOMER1Q86YM7 354 aa9.56□□□□□ -0.88
CALCOCO1-205ENST00000546774 SYTL5Q8TDW5 730 aaPredicted RBP9.56□□□□□ -0.88
CALCOCO1-205ENST00000546774 NSUN6Q8TEA1 469 aaKnown RBP9.56□□□□□ -0.88
CALCOCO1-205ENST00000546774 TOX2Q96NM4 488 aa9.56□□□□□ -0.88
CALCOCO1-205ENST00000546774 PIGSQ96S52 555 aa9.56□□□□□ -0.88
CALCOCO1-205ENST00000546774 MYL10Q9BUA6 226 aa9.56□□□□□ -0.88
CALCOCO1-205ENST00000546774 MAF1Q9H063 256 aa9.56□□□□□ -0.88
CALCOCO1-205ENST00000546774 RIOX1Q9H6W3 641 aa9.56□□□□□ -0.88
CALCOCO1-205ENST00000546774 LY9Q9HBG7 655 aa9.56□□□□□ -0.88
CALCOCO1-205ENST00000546774 TMEM39AQ9NV64 488 aa9.56□□□□□ -0.88
CALCOCO1-205ENST00000546774 COL20A1Q9P218 1284 aa9.56□□□□□ -0.88
CALCOCO1-205ENST00000546774 SSUH2Q9Y2M2 353 aa9.56□□□□□ -0.88
CALCOCO1-205ENST00000546774 PCDHA1Q9Y5I3 950 aa9.56□□□□□ -0.88
CALCOCO1-205ENST00000546774 LAMA2P24043 3122 aaKnown RBP9.55□□□□□ -0.88
CALCOCO1-205ENST00000546774 A0A0U1RQG5 324 aaPredicted RBP9.55□□□□□ -0.88
CALCOCO1-205ENST00000546774 ARVCFO00192 962 aa9.55□□□□□ -0.88
CALCOCO1-205ENST00000546774 OPLAHO14841 1288 aa9.55□□□□□ -0.88
CALCOCO1-205ENST00000546774 KIAA0355O15063 1070 aa9.55□□□□□ -0.88
CALCOCO1-205ENST00000546774 CYTH3O43739 400 aa9.55□□□□□ -0.88
CALCOCO1-205ENST00000546774 CABYRO75952 493 aa9.55□□□□□ -0.88
CALCOCO1-205ENST00000546774 RAG1P15918 1043 aa9.55□□□□□ -0.88
CALCOCO1-205ENST00000546774 LRIT3Q3SXY7 679 aa9.55□□□□□ -0.88
CALCOCO1-205ENST00000546774 ARHGEF16Q5VV41 709 aa9.55□□□□□ -0.88
CALCOCO1-205ENST00000546774 NFXL1Q6ZNB6 911 aa9.55□□□□□ -0.88
CALCOCO1-205ENST00000546774 ZNF654Q8IZM8 581 aa9.55□□□□□ -0.88
CALCOCO1-205ENST00000546774 TMTC2Q8N394 836 aa9.55□□□□□ -0.88
CALCOCO1-205ENST00000546774 PIBF1Q8WXW3 757 aa9.55□□□□□ -0.88
CALCOCO1-205ENST00000546774 RMDN3Q96TC7 470 aa9.55□□□□□ -0.88
CALCOCO1-205ENST00000546774 MTA3Q9BTC8 594 aa9.55□□□□□ -0.88
CALCOCO1-205ENST00000546774 STK24Q9Y6E0 443 aa9.55□□□□□ -0.88
CALCOCO1-205ENST00000546774 MROH7Q68CQ1 1323 aa9.55□□□□□ -0.88
CALCOCO1-205ENST00000546774 TRIP12Q14669 1992 aaPredicted RBP9.54□□□□□ -0.88
CALCOCO1-205ENST00000546774 PNMA6FA0A0J9YX94 578 aa9.54□□□□□ -0.88
CALCOCO1-205ENST00000546774 CCDC69A6NI79 296 aa9.54□□□□□ -0.88
CALCOCO1-205ENST00000546774 SH2B2O14492 632 aaPredicted RBP9.54□□□□□ -0.88
CALCOCO1-205ENST00000546774 CDC45O75419 566 aa9.54□□□□□ -0.88
CALCOCO1-205ENST00000546774 TXNP10599 105 aaKnown RBP9.54□□□□□ -0.88
CALCOCO1-205ENST00000546774 EIF2AK2P19525 551 aaKnown RBP9.54□□□□□ -0.88
CALCOCO1-205ENST00000546774 HSD17B4P51659 736 aa9.54□□□□□ -0.88
CALCOCO1-205ENST00000546774 PSMC6P62333 389 aa9.54□□□□□ -0.88
CALCOCO1-205ENST00000546774 ITGA7Q13683 1181 aa9.54□□□□□ -0.88
CALCOCO1-205ENST00000546774 PPP2R5BQ15173 497 aa9.54□□□□□ -0.88
CALCOCO1-205ENST00000546774 SHHQ15465 462 aa9.54□□□□□ -0.88
CALCOCO1-205ENST00000546774 STXBP2Q15833 593 aa9.54□□□□□ -0.88
CALCOCO1-205ENST00000546774 RNF20Q5VTR2 975 aa9.54□□□□□ -0.88
CALCOCO1-205ENST00000546774 SMYD5Q6GMV2 418 aa9.54□□□□□ -0.88
CALCOCO1-205ENST00000546774 OR6J1Q8NGC5 347 aa9.54□□□□□ -0.88
CALCOCO1-205ENST00000546774 CTCFLQ8NI51 663 aaPredicted RBP9.54□□□□□ -0.88
CALCOCO1-205ENST00000546774 SCFD2Q8WU76 684 aa9.54□□□□□ -0.88
CALCOCO1-205ENST00000546774 COPS5Q92905 334 aa9.54□□□□□ -0.88
CALCOCO1-205ENST00000546774 TMEM87BQ96K49 555 aa9.54□□□□□ -0.88
CALCOCO1-205ENST00000546774 IWS1Q96ST2 819 aa9.54□□□□□ -0.88
CALCOCO1-205ENST00000546774 MAP3K14Q99558 947 aa9.54□□□□□ -0.88
CALCOCO1-205ENST00000546774 LRRC2Q9BYS8 371 aa9.54□□□□□ -0.88
CALCOCO1-205ENST00000546774 MAP3K20Q9NYL2 800 aaKnown RBP9.54□□□□□ -0.88
CALCOCO1-205ENST00000546774 GRIN2DO15399 1336 aa9.54□□□□□ -0.88
CALCOCO1-205ENST00000546774 DOCK5Q9H7D0 1870 aa9.53□□□□□ -0.88
CALCOCO1-205ENST00000546774 NKRFO15226 690 aaKnown RBP eCLIP9.53□□□□□ -0.88
CALCOCO1-205ENST00000546774 TLR3O15455 904 aaKnown RBP9.53□□□□□ -0.88
CALCOCO1-205ENST00000546774 DDAH1O94760 285 aa9.53□□□□□ -0.88
CALCOCO1-205ENST00000546774 ARIH2O95376 493 aa9.53□□□□□ -0.88
CALCOCO1-205ENST00000546774 TIMP1P01033 207 aa9.53□□□□□ -0.88
CALCOCO1-205ENST00000546774 CD4P01730 458 aa9.53□□□□□ -0.88
CALCOCO1-205ENST00000546774 NR3C2P08235 984 aa9.53□□□□□ -0.88
CALCOCO1-205ENST00000546774 MYL3P08590 195 aa9.53□□□□□ -0.88
CALCOCO1-205ENST00000546774 RXRAP19793 462 aa9.53□□□□□ -0.88
CALCOCO1-205ENST00000546774 HOXA13P31271 388 aaPredicted RBP9.53□□□□□ -0.88
CALCOCO1-205ENST00000546774 KIF5BP33176 963 aa9.53□□□□□ -0.88
CALCOCO1-205ENST00000546774 LIFRP42702 1097 aa9.53□□□□□ -0.88
CALCOCO1-205ENST00000546774 CPT1AP50416 773 aa9.53□□□□□ -0.88
CALCOCO1-205ENST00000546774 TRAF1Q13077 416 aa9.53□□□□□ -0.88
CALCOCO1-205ENST00000546774 TTLL4Q14679 1199 aa9.53□□□□□ -0.88
CALCOCO1-205ENST00000546774 LY6KQ17RY6 165 aa9.53□□□□□ -0.88
CALCOCO1-205ENST00000546774 C9orf50Q5SZB4 431 aa9.53□□□□□ -0.88
CALCOCO1-205ENST00000546774 SEPT14Q6ZU15 432 aa9.53□□□□□ -0.88
CALCOCO1-205ENST00000546774 FAM126BQ8IXS8 530 aa9.53□□□□□ -0.88
CALCOCO1-205ENST00000546774 SAMD3Q8N6K7 520 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms