RNA–Protein interactions for RNA: ENST00000546603.5

CPNE8-204, Transcript of copine 8, humanhuman

TSL 3

Gene CPNE8, Length 1,036 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-204ENST00000546603 TIMM13Q9Y5L4 95 aaPredicted RBP8.91□□□□□ -0.98
CPNE8-204ENST00000546603 IRS2Q9Y4H2 1338 aa8.9□□□□□ -0.98
CPNE8-204ENST00000546603 BTBD11A6QL63 1104 aa8.9□□□□□ -0.98
CPNE8-204ENST00000546603 TESK1Q15569 626 aa8.9□□□□□ -0.98
CPNE8-204ENST00000546603 TARBP2Q15633 366 aaKnown RBP8.9□□□□□ -0.98
CPNE8-204ENST00000546603 SIAH1Q8IUQ4 282 aa8.9□□□□□ -0.98
CPNE8-204ENST00000546603 TMEM145Q8NBT3 493 aa8.9□□□□□ -0.98
CPNE8-204ENST00000546603 DPF3Q92784 378 aa8.9□□□□□ -0.98
CPNE8-204ENST00000546603 ZNF669Q96BR6 464 aaPredicted RBP8.9□□□□□ -0.98
CPNE8-204ENST00000546603 MYO1BO43795 1136 aa8.89□□□□□ -0.99
CPNE8-204ENST00000546603 LTBRP36941 435 aa8.89□□□□□ -0.99
CPNE8-204ENST00000546603 GTF2A2P52657 109 aa8.89□□□□□ -0.99
CPNE8-204ENST00000546603 RPL11P62913 178 aaKnown RBP8.89□□□□□ -0.99
CPNE8-204ENST00000546603 ZNF200P98182 395 aaPredicted RBP8.89□□□□□ -0.99
CPNE8-204ENST00000546603 SLC9A5Q14940 896 aa8.89□□□□□ -0.99
CPNE8-204ENST00000546603 PRSS53Q2L4Q9 553 aa8.89□□□□□ -0.99
CPNE8-204ENST00000546603 WWC2Q6AWC2 1192 aa8.89□□□□□ -0.99
CPNE8-204ENST00000546603 IGDCC3Q8IVU1 814 aa8.89□□□□□ -0.99
CPNE8-204ENST00000546603 PPIL6Q8IXY8 311 aa8.89□□□□□ -0.99
CPNE8-204ENST00000546603 PLEKHO2Q8TD55 490 aa8.89□□□□□ -0.99
CPNE8-204ENST00000546603 KCTD13Q8WZ19 329 aa8.89□□□□□ -0.99
CPNE8-204ENST00000546603 MARCH2Q9P0N8 246 aa8.89□□□□□ -0.99
CPNE8-204ENST00000546603 FBLN5Q9UBX5 448 aa8.89□□□□□ -0.99
CPNE8-204ENST00000546603 MSRB2Q9Y3D2 182 aa8.89□□□□□ -0.99
CPNE8-204ENST00000546603 IRS4O14654 1257 aaPredicted RBP8.88□□□□□ -0.99
CPNE8-204ENST00000546603 ZBTB7AO95365 584 aa8.88□□□□□ -0.99
CPNE8-204ENST00000546603 PFKLP17858 780 aa8.88□□□□□ -0.99
CPNE8-204ENST00000546603 GRIA2P42262 883 aa8.88□□□□□ -0.99
CPNE8-204ENST00000546603 MAP4K2Q12851 820 aa8.88□□□□□ -0.99
CPNE8-204ENST00000546603 SSPNQ14714 243 aa8.88□□□□□ -0.99
CPNE8-204ENST00000546603 SLC35F1Q5T1Q4 408 aa8.88□□□□□ -0.99
CPNE8-204ENST00000546603 AMIGO3Q86WK7 504 aa8.88□□□□□ -0.99
CPNE8-204ENST00000546603 CCDC103Q8IW40 242 aa8.88□□□□□ -0.99
CPNE8-204ENST00000546603 LRRC47Q8N1G4 583 aaKnown RBP8.88□□□□□ -0.99
CPNE8-204ENST00000546603 TSPAN17Q96FV3 270 aa8.88□□□□□ -0.99
CPNE8-204ENST00000546603 IRF2BPLQ9H1B7 796 aa8.88□□□□□ -0.99
CPNE8-204ENST00000546603 BTG4Q9NY30 223 aa8.88□□□□□ -0.99
CPNE8-204ENST00000546603 SIRPGQ9P1W8 387 aa8.88□□□□□ -0.99
CPNE8-204ENST00000546603 TMEFF2Q9UIK5 374 aaPredicted RBP8.88□□□□□ -0.99
CPNE8-204ENST00000546603 HCFC2Q9Y5Z7 792 aa8.88□□□□□ -0.99
CPNE8-204ENST00000546603 ARID1BQ8NFD5 2236 aaPredicted RBP8.88□□□□□ -0.99
CPNE8-204ENST00000546603 ARNTLO00327 626 aa8.87□□□□□ -0.99
CPNE8-204ENST00000546603 BUB1BO60566 1050 aaPredicted RBP8.87□□□□□ -0.99
CPNE8-204ENST00000546603 NTRK1P04629 796 aa8.87□□□□□ -0.99
CPNE8-204ENST00000546603 ZSCAN22P10073 491 aaPredicted RBP8.87□□□□□ -0.99
CPNE8-204ENST00000546603 RBL2Q08999 1139 aa8.87□□□□□ -0.99
CPNE8-204ENST00000546603 SF3A1Q15459 793 aaKnown RBP8.87□□□□□ -0.99
CPNE8-204ENST00000546603 TMEM151BQ8IW70 566 aa8.87□□□□□ -0.99
CPNE8-204ENST00000546603 C1orf159Q96HA4 380 aa8.87□□□□□ -0.99
CPNE8-204ENST00000546603 AARSD1Q9BTE6 412 aaKnown RBP8.87□□□□□ -0.99
CPNE8-204ENST00000546603 IER2Q9BTL4 223 aa8.87□□□□□ -0.99
CPNE8-204ENST00000546603 CCDC113Q9H0I3 377 aa8.87□□□□□ -0.99
CPNE8-204ENST00000546603 C22orf46C9J442 243 aa8.86□□□□□ -0.99
CPNE8-204ENST00000546603 PDPK1O15530 556 aa8.86□□□□□ -0.99
CPNE8-204ENST00000546603 PI3P19957 117 aa8.86□□□□□ -0.99
CPNE8-204ENST00000546603 NCKAP1LP55160 1127 aa8.86□□□□□ -0.99
CPNE8-204ENST00000546603 DENND5AQ6IQ26 1287 aa8.86□□□□□ -0.99
CPNE8-204ENST00000546603 DCP2Q8IU60 420 aaKnown RBP8.86□□□□□ -0.99
CPNE8-204ENST00000546603 TEX2Q8IWB9 1127 aa8.86□□□□□ -0.99
CPNE8-204ENST00000546603 RCBTB1Q8NDN9 531 aa8.86□□□□□ -0.99
CPNE8-204ENST00000546603 ALG3Q92685 438 aa8.86□□□□□ -0.99
CPNE8-204ENST00000546603 RNF38Q9H0F5 515 aa8.86□□□□□ -0.99
CPNE8-204ENST00000546603 RXFP1Q9HBX9 757 aa8.86□□□□□ -0.99
CPNE8-204ENST00000546603 FGFR1P11362 822 aa8.85□□□□□ -0.99
CPNE8-204ENST00000546603 NCAM1P13591 858 aa8.85□□□□□ -0.99
CPNE8-204ENST00000546603 BCL6P41182 706 aa8.85□□□□□ -0.99
CPNE8-204ENST00000546603 RASGRF1Q13972 1273 aa8.85□□□□□ -0.99
CPNE8-204ENST00000546603 SOGA3Q5TF21 947 aa8.85□□□□□ -0.99
CPNE8-204ENST00000546603 MROH9Q5TGP6 573 aa8.85□□□□□ -0.99
CPNE8-204ENST00000546603 CNKSR3Q6P9H4 555 aa8.85□□□□□ -0.99
CPNE8-204ENST00000546603 CEP68Q76N32 757 aa8.85□□□□□ -0.99
CPNE8-204ENST00000546603 TRMT2BQ96GJ1 504 aaKnown RBP8.85□□□□□ -0.99
CPNE8-204ENST00000546603 AP5M1Q9H0R1 490 aa8.85□□□□□ -0.99
CPNE8-204ENST00000546603 NPFFR2Q9Y5X5 522 aa8.85□□□□□ -0.99
CPNE8-204ENST00000546603 DLX3O60479 287 aa8.84□□□□□ -0.99
CPNE8-204ENST00000546603 FBLN1P23142 703 aa8.84□□□□□ -0.99
CPNE8-204ENST00000546603 IGFBP6P24592 240 aaPredicted RBP8.84□□□□□ -0.99
CPNE8-204ENST00000546603 LSAMPQ13449 338 aa8.84□□□□□ -0.99
CPNE8-204ENST00000546603 TCERG1LQ5VWI1 586 aa8.84□□□□□ -0.99
CPNE8-204ENST00000546603 FAM129CQ86XR2 697 aa8.84□□□□□ -0.99
CPNE8-204ENST00000546603 RIOX2Q8IUF8 465 aa8.84□□□□□ -0.99
CPNE8-204ENST00000546603 TMEFF1Q8IYR6 380 aa8.84□□□□□ -0.99
CPNE8-204ENST00000546603 Q8N1Y9 231 aa8.84□□□□□ -0.99
CPNE8-204ENST00000546603 TMEM169Q96HH4 297 aa8.84□□□□□ -0.99
CPNE8-204ENST00000546603 ARHGEF4Q9NR80 690 aa8.84□□□□□ -0.99
CPNE8-204ENST00000546603 PCDHA2Q9Y5H9 948 aa8.84□□□□□ -0.99
CPNE8-204ENST00000546603 X6R8D5 127 aa8.84□□□□□ -0.99
CPNE8-204ENST00000546603 TRAV20A0A0B4J274 112 aa8.83□□□□□ -1
CPNE8-204ENST00000546603 PRODHO43272 600 aa8.83□□□□□ -1
CPNE8-204ENST00000546603 MTERF2Q49AM1 385 aa8.83□□□□□ -1
CPNE8-204ENST00000546603 NSMFQ6X4W1 530 aa8.83□□□□□ -1
CPNE8-204ENST00000546603 LCNL1Q6ZST4 164 aa8.83□□□□□ -1
CPNE8-204ENST00000546603 NLGN1Q8N2Q7 840 aa8.83□□□□□ -1
CPNE8-204ENST00000546603 PANK1Q8TE04 598 aa8.83□□□□□ -1
CPNE8-204ENST00000546603 DACT3Q96B18 629 aaPredicted RBP8.83□□□□□ -1
CPNE8-204ENST00000546603 CHAMP1Q96JM3 812 aa8.83□□□□□ -1
CPNE8-204ENST00000546603 SPATA9Q9BWV2 254 aa8.83□□□□□ -1
CPNE8-204ENST00000546603 EPB41L4AQ9HCS5 686 aaPredicted RBP8.83□□□□□ -1
CPNE8-204ENST00000546603 GPR27Q9NS67 375 aa8.83□□□□□ -1
CPNE8-204ENST00000546603 CCDC85CA6NKD9 419 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms