RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 GPHNQ9NQX3 736 aaPredicted RBP26.45■■□□□ 1.83
CHD4-214ENST00000545942 ZBTB5O15062 677 aa26.44■■□□□ 1.82
CHD4-214ENST00000545942 B4GALT4O60513 344 aa26.44■■□□□ 1.82
CHD4-214ENST00000545942 MYL3P08590 195 aa26.44■■□□□ 1.82
CHD4-214ENST00000545942 WTAPQ15007 396 aa26.44■■□□□ 1.82
CHD4-214ENST00000545942 STOX1Q6ZVD7 989 aa26.44■■□□□ 1.82
CHD4-214ENST00000545942 GUCD1Q96NT3 240 aa26.44■■□□□ 1.82
CHD4-214ENST00000545942 TRPV6Q9H1D0 765 aa26.44■■□□□ 1.82
CHD4-214ENST00000545942 A6NJR5 290 aa26.43■■□□□ 1.82
CHD4-214ENST00000545942 CFBP00751 764 aa26.43■■□□□ 1.82
CHD4-214ENST00000545942 CYP2C18P33260 490 aa26.43■■□□□ 1.82
CHD4-214ENST00000545942 GRM4Q14833 912 aa26.43■■□□□ 1.82
CHD4-214ENST00000545942 STXBP2Q15833 593 aa26.43■■□□□ 1.82
CHD4-214ENST00000545942 SLC17A8Q8NDX2 589 aa26.43■■□□□ 1.82
CHD4-214ENST00000545942 COPS5Q92905 334 aa26.43■■□□□ 1.82
CHD4-214ENST00000545942 MTG1Q9BT17 334 aaPredicted RBP26.43■■□□□ 1.82
CHD4-214ENST00000545942 ALDH8A1Q9H2A2 487 aaPredicted RBP26.43■■□□□ 1.82
CHD4-214ENST00000545942 RBM8AQ9Y5S9 174 aaKnown RBP26.43■■□□□ 1.82
CHD4-214ENST00000545942 KPNA6O60684 536 aa26.42■■□□□ 1.82
CHD4-214ENST00000545942 TMEM240Q5SV17 173 aa26.42■■□□□ 1.82
CHD4-214ENST00000545942 ARHGEF16Q5VV41 709 aa26.42■■□□□ 1.82
CHD4-214ENST00000545942 C16orf59Q7L2K0 433 aa26.42■■□□□ 1.82
CHD4-214ENST00000545942 CHST3Q7LGC8 479 aa26.42■■□□□ 1.82
CHD4-214ENST00000545942 SENP2Q9HC62 589 aa26.42■■□□□ 1.82
CHD4-214ENST00000545942 PCDHA1Q9Y5I3 950 aa26.42■■□□□ 1.82
CHD4-214ENST00000545942 OPLAHO14841 1288 aa26.41■■□□□ 1.82
CHD4-214ENST00000545942 PPP1R11O60927 126 aaPredicted RBP26.41■■□□□ 1.82
CHD4-214ENST00000545942 ARIH2O95376 493 aa26.41■■□□□ 1.82
CHD4-214ENST00000545942 HSD17B4P51659 736 aa26.41■■□□□ 1.82
CHD4-214ENST00000545942 GHRHRQ02643 423 aa26.41■■□□□ 1.82
CHD4-214ENST00000545942 TROAPQ12815 778 aa26.41■■□□□ 1.82
CHD4-214ENST00000545942 TMEM67Q5HYA8 995 aa26.41■■□□□ 1.82
CHD4-214ENST00000545942 CCDC62Q6P9F0 684 aa26.41■■□□□ 1.82
CHD4-214ENST00000545942 PSRC1Q6PGN9 363 aaPredicted RBP26.41■■□□□ 1.82
CHD4-214ENST00000545942 SEPT14Q6ZU15 432 aa26.41■■□□□ 1.82
CHD4-214ENST00000545942 NOC4LQ9BVI4 516 aaKnown RBP26.41■■□□□ 1.82
CHD4-214ENST00000545942 SEMA6BQ9H3T3 888 aa26.41■■□□□ 1.82
CHD4-214ENST00000545942 MAP3K20Q9NYL2 800 aaKnown RBP26.41■■□□□ 1.82
CHD4-214ENST00000545942 HSFX4A0A1B0GTS1 333 aaPredicted RBP26.4■■□□□ 1.82
CHD4-214ENST00000545942 HSFX3A0A1B0GWH4 333 aaPredicted RBP26.4■■□□□ 1.82
CHD4-214ENST00000545942 SUPT20HL2P0C7V6 817 aa26.4■■□□□ 1.82
CHD4-214ENST00000545942 TRAF1Q13077 416 aa26.4■■□□□ 1.82
CHD4-214ENST00000545942 CATIPQ7Z7H3 387 aa26.4■■□□□ 1.82
CHD4-214ENST00000545942 HOMER1Q86YM7 354 aa26.4■■□□□ 1.82
CHD4-214ENST00000545942 MB21D2Q8IYB1 491 aaPredicted RBP26.4■■□□□ 1.82
CHD4-214ENST00000545942 RIOX1Q9H6W3 641 aa26.4■■□□□ 1.82
CHD4-214ENST00000545942 PXMP2Q9NR77 195 aa26.4■■□□□ 1.82
CHD4-214ENST00000545942 ACRP10323 421 aa26.39■■□□□ 1.82
CHD4-214ENST00000545942 EIF2AK2P19525 551 aaKnown RBP26.39■■□□□ 1.82
CHD4-214ENST00000545942 ANTXR2P58335 489 aa26.39■■□□□ 1.82
CHD4-214ENST00000545942 SLC35G1Q2M3R5 365 aa26.39■■□□□ 1.82
CHD4-214ENST00000545942 ZNF365Q70YC5 407 aa26.39■■□□□ 1.82
CHD4-214ENST00000545942 SAMD3Q8N6K7 520 aa26.39■■□□□ 1.82
CHD4-214ENST00000545942 IGDCC4Q8TDY8 1250 aa26.39■■□□□ 1.82
CHD4-214ENST00000545942 PIGSQ96S52 555 aa26.39■■□□□ 1.82
CHD4-214ENST00000545942 IL23AQ9NPF7 189 aa26.39■■□□□ 1.82
CHD4-214ENST00000545942 UMODL1Q5DID0 1318 aa26.39■■□□□ 1.82
CHD4-214ENST00000545942 TMEM265A0A087WTH1 108 aa26.39■■□□□ 1.81
CHD4-214ENST00000545942 GH1P01241 217 aa26.39■■□□□ 1.81
CHD4-214ENST00000545942 NR3C2P08235 984 aa26.39■■□□□ 1.81
CHD4-214ENST00000545942 LY6KQ17RY6 165 aa26.39■■□□□ 1.81
CHD4-214ENST00000545942 TTYH1Q9H313 450 aaPredicted RBP26.39■■□□□ 1.81
CHD4-214ENST00000545942 EIF3JO75822 258 aaKnown RBP26.38■■□□□ 1.81
CHD4-214ENST00000545942 CCL23P55773 120 aa26.38■■□□□ 1.81
CHD4-214ENST00000545942 NBPF20Q3BBV1 942 aa26.38■■□□□ 1.81
CHD4-214ENST00000545942 RASIP1Q5U651 963 aa26.38■■□□□ 1.81
CHD4-214ENST00000545942 NFRKBQ6P4R8 1299 aa26.38■■□□□ 1.81
CHD4-214ENST00000545942 LSG1Q9H089 658 aaKnown RBP26.38■■□□□ 1.81
CHD4-214ENST00000545942 TRMT13Q9NUP7 481 aaKnown RBP26.38■■□□□ 1.81
CHD4-214ENST00000545942 PNMA6FA0A0J9YX94 578 aa26.37■■□□□ 1.81
CHD4-214ENST00000545942 CYTH3O43739 400 aa26.37■■□□□ 1.81
CHD4-214ENST00000545942 FAM47CQ5HY64 1035 aa26.37■■□□□ 1.81
CHD4-214ENST00000545942 AFG1LQ8WV93 481 aa26.37■■□□□ 1.81
CHD4-214ENST00000545942 CDX2Q99626 313 aaPredicted RBP26.37■■□□□ 1.81
CHD4-214ENST00000545942 ESYT1Q9BSJ8 1104 aa26.37■■□□□ 1.81
CHD4-214ENST00000545942 MTA3Q9BTC8 594 aa26.37■■□□□ 1.81
CHD4-214ENST00000545942 HOXA13P31271 388 aaPredicted RBP26.36■■□□□ 1.81
CHD4-214ENST00000545942 CASC1Q6TDU7 716 aa26.36■■□□□ 1.81
CHD4-214ENST00000545942 PDCD2LQ9BRP1 358 aa26.36■■□□□ 1.81
CHD4-214ENST00000545942 WNT8AQ9H1J5 351 aa26.36■■□□□ 1.81
CHD4-214ENST00000545942 LY9Q9HBG7 655 aa26.36■■□□□ 1.81
CHD4-214ENST00000545942 MYH6P13533 1939 aa26.35■■□□□ 1.81
CHD4-214ENST00000545942 FGBP02675 491 aa26.35■■□□□ 1.81
CHD4-214ENST00000545942 DNAJB2P25686 324 aa26.35■■□□□ 1.81
CHD4-214ENST00000545942 PTPN11Q06124 597 aaPredicted RBP26.35■■□□□ 1.81
CHD4-214ENST00000545942 ARHGAP1Q07960 439 aa26.35■■□□□ 1.81
CHD4-214ENST00000545942 CENPQQ7L2Z9 268 aaPredicted RBP26.35■■□□□ 1.81
CHD4-214ENST00000545942 HERVK_113Q902F9 699 aa26.35■■□□□ 1.81
CHD4-214ENST00000545942 MAP3K14Q99558 947 aa26.35■■□□□ 1.81
CHD4-214ENST00000545942 MTIF3Q9H2K0 278 aaKnown RBP26.35■■□□□ 1.81
CHD4-214ENST00000545942 DDX41Q9UJV9 622 aaKnown RBP26.35■■□□□ 1.81
CHD4-214ENST00000545942 MRVI1Q9Y6F6 885 aa26.35■■□□□ 1.81
CHD4-214ENST00000545942 GCOM1H8Y6P7 765 aaPredicted RBP26.34■■□□□ 1.81
CHD4-214ENST00000545942 PRC1O43663 620 aa26.34■■□□□ 1.81
CHD4-214ENST00000545942 DDAH1O94760 285 aa26.34■■□□□ 1.81
CHD4-214ENST00000545942 MMP3P08254 477 aa26.34■■□□□ 1.81
CHD4-214ENST00000545942 POLR2MP0CAP2 368 aa26.34■■□□□ 1.81
CHD4-214ENST00000545942 CYP2C9P11712 490 aa26.34■■□□□ 1.81
CHD4-214ENST00000545942 MCM5P33992 734 aa26.34■■□□□ 1.81
CHD4-214ENST00000545942 ZNF654Q8IZM8 581 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms