RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 CYP2B6P20813 491 aa9.1□□□□□ -0.95
SNHG1-223ENST00000545440 ALX1Q15699 326 aa9.1□□□□□ -0.95
SNHG1-223ENST00000545440 MCMDC2Q4G0Z9 681 aa9.1□□□□□ -0.95
SNHG1-223ENST00000545440 ZNF444Q8N0Y2 327 aaPredicted RBP9.1□□□□□ -0.95
SNHG1-223ENST00000545440 STK11IPQ8N1F8 1099 aa9.1□□□□□ -0.95
SNHG1-223ENST00000545440 NEDD1Q8NHV4 660 aa9.1□□□□□ -0.95
SNHG1-223ENST00000545440 STK32AQ8WU08 396 aa9.1□□□□□ -0.95
SNHG1-223ENST00000545440 ATG4CQ96DT6 458 aa9.1□□□□□ -0.95
SNHG1-223ENST00000545440 CEP95Q96GE4 821 aa9.1□□□□□ -0.95
SNHG1-223ENST00000545440 FAM227BQ96M60 508 aa9.1□□□□□ -0.95
SNHG1-223ENST00000545440 DEFB118Q96PH6 123 aa9.1□□□□□ -0.95
SNHG1-223ENST00000545440 MOV10L1Q9BXT6 1211 aaKnown RBP9.1□□□□□ -0.95
SNHG1-223ENST00000545440 ANAPC4Q9UJX5 808 aa9.1□□□□□ -0.95
SNHG1-223ENST00000545440 ZMIZ1Q9ULJ6 1067 aa9.1□□□□□ -0.95
SNHG1-223ENST00000545440 PPP1R9AQ9ULJ8 1098 aa9.1□□□□□ -0.95
SNHG1-223ENST00000545440 ADAMTS5Q9UNA0 930 aa9.1□□□□□ -0.95
SNHG1-223ENST00000545440 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.1□□□□□ -0.95
SNHG1-223ENST00000545440 PCDHGA11Q9Y5H2 935 aa9.1□□□□□ -0.95
SNHG1-223ENST00000545440 TNFRSF10AO00220 468 aa9.09□□□□□ -0.95
SNHG1-223ENST00000545440 STRNO43815 780 aa9.09□□□□□ -0.95
SNHG1-223ENST00000545440 FARP2O94887 1054 aaPredicted RBP9.09□□□□□ -0.95
SNHG1-223ENST00000545440 UPP2O95045 317 aa9.09□□□□□ -0.95
SNHG1-223ENST00000545440 NDUFB10O96000 172 aa9.09□□□□□ -0.95
SNHG1-223ENST00000545440 COPB2P35606 906 aa9.09□□□□□ -0.95
SNHG1-223ENST00000545440 MFAP1P55081 439 aaKnown RBP9.09□□□□□ -0.95
SNHG1-223ENST00000545440 NMIQ13287 307 aaPredicted RBP9.09□□□□□ -0.95
SNHG1-223ENST00000545440 FAM83BQ5T0W9 1011 aa9.09□□□□□ -0.95
SNHG1-223ENST00000545440 VPS53Q5VIR6 699 aa9.09□□□□□ -0.95
SNHG1-223ENST00000545440 WDR78Q5VTH9 848 aa9.09□□□□□ -0.95
SNHG1-223ENST00000545440 ZNF589Q86UQ0 364 aaPredicted RBP9.09□□□□□ -0.95
SNHG1-223ENST00000545440 ABRAQ8N0Z2 381 aa9.09□□□□□ -0.95
SNHG1-223ENST00000545440 GMCL1P1Q8NEA9 526 aa9.09□□□□□ -0.95
SNHG1-223ENST00000545440 MKL1Q969V6 931 aa9.09□□□□□ -0.95
SNHG1-223ENST00000545440 SLF1Q9BQI6 1058 aa9.09□□□□□ -0.95
SNHG1-223ENST00000545440 MROH8Q9H579 483 aa9.09□□□□□ -0.95
SNHG1-223ENST00000545440 MTMR4Q9NYA4 1195 aa9.09□□□□□ -0.95
SNHG1-223ENST00000545440 PKD2L1Q9P0L9 805 aa9.09□□□□□ -0.95
SNHG1-223ENST00000545440 LTBP2Q14767 1821 aa9.08□□□□□ -0.96
SNHG1-223ENST00000545440 F5H6K3 240 aa9.08□□□□□ -0.96
SNHG1-223ENST00000545440 M0R2N6 131 aa9.08□□□□□ -0.96
SNHG1-223ENST00000545440 HIP1O00291 1037 aa9.08□□□□□ -0.96
SNHG1-223ENST00000545440 VWA5AO00534 786 aa9.08□□□□□ -0.96
SNHG1-223ENST00000545440 ORC4O43929 436 aa9.08□□□□□ -0.96
SNHG1-223ENST00000545440 SLC25A27O95847 323 aa9.08□□□□□ -0.96
SNHG1-223ENST00000545440 FGRP09769 529 aa9.08□□□□□ -0.96
SNHG1-223ENST00000545440 HSPD1P10809 573 aaKnown RBP9.08□□□□□ -0.96
SNHG1-223ENST00000545440 PCP11498 1178 aaKnown RBP9.08□□□□□ -0.96
SNHG1-223ENST00000545440 ERCC3P19447 782 aa9.08□□□□□ -0.96
SNHG1-223ENST00000545440 SDSP20132 328 aa9.08□□□□□ -0.96
SNHG1-223ENST00000545440 SCTRP47872 440 aa9.08□□□□□ -0.96
SNHG1-223ENST00000545440 KLRC3Q07444 240 aa9.08□□□□□ -0.96
SNHG1-223ENST00000545440 PLS1Q14651 629 aa9.08□□□□□ -0.96
SNHG1-223ENST00000545440 TMEM132BQ14DG7 1078 aa9.08□□□□□ -0.96
SNHG1-223ENST00000545440 CCL14Q16627 93 aa9.08□□□□□ -0.96
SNHG1-223ENST00000545440 RIOX2Q8IUF8 465 aa9.08□□□□□ -0.96
SNHG1-223ENST00000545440 LRRC47Q8N1G4 583 aaKnown RBP9.08□□□□□ -0.96
SNHG1-223ENST00000545440 CLP1Q92989 425 aaKnown RBP9.08□□□□□ -0.96
SNHG1-223ENST00000545440 RILPL2Q969X0 211 aa9.08□□□□□ -0.96
SNHG1-223ENST00000545440 HTATIP2Q9BUP3 242 aa9.08□□□□□ -0.96
SNHG1-223ENST00000545440 FBXO28Q9NVF7 368 aa9.08□□□□□ -0.96
SNHG1-223ENST00000545440 ZNF214Q9UL59 606 aaPredicted RBP9.08□□□□□ -0.96
SNHG1-223ENST00000545440 TSPY2A6NKD2 308 aa9.07□□□□□ -0.96
SNHG1-223ENST00000545440 ATP2A1O14983 1001 aa9.07□□□□□ -0.96
SNHG1-223ENST00000545440 ZIC2O95409 532 aaPredicted RBP9.07□□□□□ -0.96
SNHG1-223ENST00000545440 IGHA2P01877 340 aa9.07□□□□□ -0.96
SNHG1-223ENST00000545440 FGAP02671 866 aa9.07□□□□□ -0.96
SNHG1-223ENST00000545440 ADORA2AP29274 412 aa9.07□□□□□ -0.96
SNHG1-223ENST00000545440 NT5C2P49902 561 aa9.07□□□□□ -0.96
SNHG1-223ENST00000545440 GDF10P55107 478 aa9.07□□□□□ -0.96
SNHG1-223ENST00000545440 WDR4P57081 412 aaKnown RBP9.07□□□□□ -0.96
SNHG1-223ENST00000545440 PRR20EP86478 221 aa9.07□□□□□ -0.96
SNHG1-223ENST00000545440 PRR20CP86479 221 aa9.07□□□□□ -0.96
SNHG1-223ENST00000545440 PRR20DP86480 221 aa9.07□□□□□ -0.96
SNHG1-223ENST00000545440 PRR20BP86481 221 aa9.07□□□□□ -0.96
SNHG1-223ENST00000545440 PRR20AP86496 221 aa9.07□□□□□ -0.96
SNHG1-223ENST00000545440 TFAP4Q01664 338 aa9.07□□□□□ -0.96
SNHG1-223ENST00000545440 FAM47AQ5JRC9 791 aa9.07□□□□□ -0.96
SNHG1-223ENST00000545440 MFSD14CQ5VZR4 134 aa9.07□□□□□ -0.96
SNHG1-223ENST00000545440 OLFML2BQ68BL8 750 aa9.07□□□□□ -0.96
SNHG1-223ENST00000545440 NCAPG2Q86XI2 1143 aa9.07□□□□□ -0.96
SNHG1-223ENST00000545440 REPS2Q8NFH8 660 aa9.07□□□□□ -0.96
SNHG1-223ENST00000545440 NUP88Q99567 741 aaPredicted RBP9.07□□□□□ -0.96
SNHG1-223ENST00000545440 TEX13BQ9BXU2 312 aa9.07□□□□□ -0.96
SNHG1-223ENST00000545440 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.07□□□□□ -0.961e-323■■■■□ 19.6
SNHG1-223ENST00000545440 DIAPH3Q9NSV4 1193 aa9.07□□□□□ -0.96
SNHG1-223ENST00000545440 SLC5A4Q9NY91 659 aa9.07□□□□□ -0.96
SNHG1-223ENST00000545440 CLIP2Q9UDT6 1046 aa9.07□□□□□ -0.96
SNHG1-223ENST00000545440 OGDHLQ9ULD0 1010 aa9.07□□□□□ -0.96
SNHG1-223ENST00000545440 KIAA1217Q5T5P2 1943 aa9.07□□□□□ -0.96
SNHG1-223ENST00000545440 TRIOBPQ9H2D6 2365 aa9.06□□□□□ -0.96
SNHG1-223ENST00000545440 SFI1A8K8P3 1242 aa9.06□□□□□ -0.96
SNHG1-223ENST00000545440 MSCO60682 206 aa9.06□□□□□ -0.96
SNHG1-223ENST00000545440 TFRCP02786 760 aaKnown RBP9.06□□□□□ -0.96
SNHG1-223ENST00000545440 NR3C2P08235 984 aa9.06□□□□□ -0.96
SNHG1-223ENST00000545440 FCER1AP12319 257 aa9.06□□□□□ -0.96
SNHG1-223ENST00000545440 NOVP48745 357 aa9.06□□□□□ -0.96
SNHG1-223ENST00000545440 OAZ1P54368 228 aa9.06□□□□□ -0.96
SNHG1-223ENST00000545440 CACNB2Q08289 660 aaPredicted RBP9.06□□□□□ -0.96
SNHG1-223ENST00000545440 TTC22Q5TAA0 569 aa9.06□□□□□ -0.96
SNHG1-223ENST00000545440 DPP9Q86TI2 863 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms