RNA–Protein interactions for RNA: ENST00000544872.1

CIT-216, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-216ENST00000544872 ADGRF4Q8IZF3 695 aa11□□□□□ -0.65
CIT-216ENST00000544872 FBXL16Q8N461 479 aa11□□□□□ -0.65
CIT-216ENST00000544872 TRERF1Q96PN7 1200 aa11□□□□□ -0.65
CIT-216ENST00000544872 PRRX2Q99811 253 aa11□□□□□ -0.65
CIT-216ENST00000544872 AMNQ9BXJ7 453 aa11□□□□□ -0.65
CIT-216ENST00000544872 LRRC2Q9BYS8 371 aa11□□□□□ -0.65
CIT-216ENST00000544872 TXNRD2Q9NNW7 524 aa11□□□□□ -0.65
CIT-216ENST00000544872 BTBD7Q9P203 1132 aa11□□□□□ -0.65
CIT-216ENST00000544872 TAF6LQ9Y6J9 622 aa11□□□□□ -0.65
CIT-216ENST00000544872 PALM3A6NDB9 673 aaPredicted RBP10.99□□□□□ -0.65
CIT-216ENST00000544872 XRCC5P13010 732 aaKnown RBP10.99□□□□□ -0.65
CIT-216ENST00000544872 PTPREP23469 700 aa10.99□□□□□ -0.65
CIT-216ENST00000544872 NEK4P51957 841 aa10.99□□□□□ -0.65
CIT-216ENST00000544872 TROAPQ12815 778 aa10.99□□□□□ -0.65
CIT-216ENST00000544872 MAP2K5Q13163 448 aa10.99□□□□□ -0.65
CIT-216ENST00000544872 ACAP1Q15027 740 aa10.99□□□□□ -0.65
CIT-216ENST00000544872 GJC2Q5T442 439 aaPredicted RBP10.99□□□□□ -0.65
CIT-216ENST00000544872 TTBK2Q6IQ55 1244 aa10.99□□□□□ -0.65
CIT-216ENST00000544872 TRIM22Q8IYM9 498 aa10.99□□□□□ -0.65
CIT-216ENST00000544872 RANBP17Q9H2T7 1088 aaKnown RBP10.99□□□□□ -0.65
CIT-216ENST00000544872 HOMER2Q9NSB8 354 aa10.99□□□□□ -0.65
CIT-216ENST00000544872 DOCK1Q14185 1865 aa10.99□□□□□ -0.65
CIT-216ENST00000544872 C5orf42Q9H799 3197 aa10.98□□□□□ -0.65
CIT-216ENST00000544872 FOCADQ5VW36 1801 aa10.98□□□□□ -0.65
CIT-216ENST00000544872 PNMA6FA0A0J9YX94 578 aa10.98□□□□□ -0.65
CIT-216ENST00000544872 SOWAHBA6NEL2 793 aa10.98□□□□□ -0.65
CIT-216ENST00000544872 ZBTB5O15062 677 aa10.98□□□□□ -0.65
CIT-216ENST00000544872 CLTBP09497 229 aa10.98□□□□□ -0.65
CIT-216ENST00000544872 TLE2Q04725 743 aa10.98□□□□□ -0.65
CIT-216ENST00000544872 CDC37Q16543 378 aaPredicted RBP10.98□□□□□ -0.65
CIT-216ENST00000544872 C8orf34Q49A92 452 aa10.98□□□□□ -0.65
CIT-216ENST00000544872 PPP2R2DQ66LE6 453 aa10.98□□□□□ -0.65
CIT-216ENST00000544872 APOA5Q6Q788 366 aa10.98□□□□□ -0.65
CIT-216ENST00000544872 HOMER1Q86YM7 354 aa10.98□□□□□ -0.65
CIT-216ENST00000544872 CCDC144CPQ8IYA2 1237 aa10.98□□□□□ -0.65
CIT-216ENST00000544872 SAMD3Q8N6K7 520 aa10.98□□□□□ -0.65
CIT-216ENST00000544872 ATOH1Q92858 354 aaPredicted RBP10.98□□□□□ -0.65
CIT-216ENST00000544872 CUL5Q93034 780 aa10.98□□□□□ -0.65
CIT-216ENST00000544872 ZNF274Q96GC6 653 aaPredicted RBP10.98□□□□□ -0.65
CIT-216ENST00000544872 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.98□□□□□ -0.65
CIT-216ENST00000544872 UPF3BQ9BZI7 483 aaKnown RBP10.98□□□□□ -0.65
CIT-216ENST00000544872 PORCNQ9H237 461 aa10.98□□□□□ -0.65
CIT-216ENST00000544872 SLKQ9H2G2 1235 aaPredicted RBP10.98□□□□□ -0.65
CIT-216ENST00000544872 RNF146Q9NTX7 359 aa10.98□□□□□ -0.65
CIT-216ENST00000544872 ADD3Q9UEY8 706 aaKnown RBP10.98□□□□□ -0.65
CIT-216ENST00000544872 MAD2L2Q9UI95 211 aa10.98□□□□□ -0.65
CIT-216ENST00000544872 ZNF214Q9UL59 606 aaPredicted RBP10.98□□□□□ -0.65
CIT-216ENST00000544872 PCDHA1Q9Y5I3 950 aa10.98□□□□□ -0.65
CIT-216ENST00000544872 DNAH12Q6ZR08 3092 aa10.98□□□□□ -0.65
CIT-216ENST00000544872 ABCB11O95342 1321 aa10.98□□□□□ -0.65
CIT-216ENST00000544872 FAM186AA6NE01 2351 aa10.98□□□□□ -0.65
CIT-216ENST00000544872 PTPDC1A2A3K4 754 aa10.97□□□□□ -0.65
CIT-216ENST00000544872 MSCO60682 206 aa10.97□□□□□ -0.65
CIT-216ENST00000544872 CNMDO75829 334 aa10.97□□□□□ -0.65
CIT-216ENST00000544872 XBP1P17861 261 aa10.97□□□□□ -0.65
CIT-216ENST00000544872 ADORA2AP29274 412 aa10.97□□□□□ -0.65
CIT-216ENST00000544872 APOBRQ0VD83 1088 aa10.97□□□□□ -0.65
CIT-216ENST00000544872 RABEP1Q15276 862 aa10.97□□□□□ -0.65
CIT-216ENST00000544872 USH1GQ495M9 461 aa10.97□□□□□ -0.65
CIT-216ENST00000544872 NSMFQ6X4W1 530 aa10.97□□□□□ -0.65
CIT-216ENST00000544872 FAM178BQ8IXR5 827 aa10.97□□□□□ -0.65
CIT-216ENST00000544872 ARRDC4Q8NCT1 418 aa10.97□□□□□ -0.65
CIT-216ENST00000544872 CCDC12Q8WUD4 166 aaPredicted RBP10.97□□□□□ -0.65
CIT-216ENST00000544872 AGBL1Q96MI9 1066 aa10.97□□□□□ -0.65
CIT-216ENST00000544872 TCEANC2Q96MN5 208 aa10.97□□□□□ -0.65
CIT-216ENST00000544872 APBA2Q99767 749 aa10.97□□□□□ -0.65
CIT-216ENST00000544872 SPZ1Q9BXG8 430 aa10.97□□□□□ -0.65
CIT-216ENST00000544872 GLT8D2Q9H1C3 349 aa10.97□□□□□ -0.65
CIT-216ENST00000544872 ALDH8A1Q9H2A2 487 aaPredicted RBP10.97□□□□□ -0.65
CIT-216ENST00000544872 MAP3K20Q9NYL2 800 aaKnown RBP10.97□□□□□ -0.65
CIT-216ENST00000544872 DDX20Q9UHI6 824 aaKnown RBP10.97□□□□□ -0.65
CIT-216ENST00000544872 CNPY2Q9Y2B0 182 aa10.97□□□□□ -0.65
CIT-216ENST00000544872 DIS3Q9Y2L1 958 aaKnown RBP10.97□□□□□ -0.65
CIT-216ENST00000544872 ASB14A6NK59 587 aa10.96□□□□□ -0.65
CIT-216ENST00000544872 CPA1P15085 419 aa10.96□□□□□ -0.65
CIT-216ENST00000544872 MCM2P49736 904 aa10.96□□□□□ -0.65
CIT-216ENST00000544872 SNAP25P60880 206 aa10.96□□□□□ -0.65
CIT-216ENST00000544872 GRB14Q14449 540 aa10.96□□□□□ -0.65
CIT-216ENST00000544872 CCL14Q16627 93 aa10.96□□□□□ -0.65
CIT-216ENST00000544872 IER5LQ5T953 404 aa10.96□□□□□ -0.65
CIT-216ENST00000544872 RNF207Q6ZRF8 634 aa10.96□□□□□ -0.65
CIT-216ENST00000544872 STAG2Q8N3U4 1231 aa10.96□□□□□ -0.65
CIT-216ENST00000544872 CCDC82Q8N4S0 544 aa10.96□□□□□ -0.65
CIT-216ENST00000544872 MSL3Q8N5Y2 521 aaKnown RBP10.96□□□□□ -0.65
CIT-216ENST00000544872 RGS22Q8NE09 1264 aa10.96□□□□□ -0.65
CIT-216ENST00000544872 WASF1Q92558 559 aa10.96□□□□□ -0.65
CIT-216ENST00000544872 FERMT2Q96AC1 680 aa10.96□□□□□ -0.65
CIT-216ENST00000544872 ZSCAN31Q96LW9 406 aaPredicted RBP10.96□□□□□ -0.65
CIT-216ENST00000544872 MYL10Q9BUA6 226 aa10.96□□□□□ -0.65
CIT-216ENST00000544872 RIOX1Q9H6W3 641 aa10.96□□□□□ -0.65
CIT-216ENST00000544872 JMJD4Q9H9V9 463 aa10.96□□□□□ -0.65
CIT-216ENST00000544872 TMEM39AQ9NV64 488 aa10.96□□□□□ -0.65
CIT-216ENST00000544872 MTCH2Q9Y6C9 303 aa10.96□□□□□ -0.65
CIT-216ENST00000544872 KMT2BQ9UMN6 2715 aaPredicted RBP10.95□□□□□ -0.66
CIT-216ENST00000544872 hCG_1984214I3L0E3 225 aa10.95□□□□□ -0.66
CIT-216ENST00000544872 SEC24BO95487 1268 aa10.95□□□□□ -0.66
CIT-216ENST00000544872 HOXC6P09630 235 aa10.95□□□□□ -0.66
CIT-216ENST00000544872 RBM25P49756 843 aaKnown RBP10.95□□□□□ -0.66
CIT-216ENST00000544872 SSRP1Q08945 709 aaKnown RBP10.95□□□□□ -0.66
CIT-216ENST00000544872 QRICH1Q2TAL8 776 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms