RNA–Protein interactions for RNA: ENST00000544725.5

COPS7A-220, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-220ENST00000544725 WDR5P61964 334 aaKnown RBP17.25■□□□□ 0.35
COPS7A-220ENST00000544725 SPRED2Q7Z698 418 aa17.25■□□□□ 0.35
COPS7A-220ENST00000544725 PPP1R13LQ8WUF5 828 aa17.25■□□□□ 0.35
COPS7A-220ENST00000544725 MTMR7Q9Y216 660 aa17.25■□□□□ 0.35
COPS7A-220ENST00000544725 TANC1Q9C0D5 1861 aa17.24■□□□□ 0.35
COPS7A-220ENST00000544725 PARNO95453 639 aaKnown RBP17.24■□□□□ 0.35
COPS7A-220ENST00000544725 CALML3P27482 149 aa17.24■□□□□ 0.35
COPS7A-220ENST00000544725 PTGISQ16647 500 aa17.24■□□□□ 0.35
COPS7A-220ENST00000544725 RASGRP2Q7LDG7 609 aa17.24■□□□□ 0.35
COPS7A-220ENST00000544725 ALYREFQ86V81 257 aaKnown RBP17.24■□□□□ 0.35
COPS7A-220ENST00000544725 GJD3Q8N144 294 aa17.24■□□□□ 0.35
COPS7A-220ENST00000544725 TGS1Q96RS0 853 aaKnown RBP17.24■□□□□ 0.35
COPS7A-220ENST00000544725 IL17RBQ9NRM6 502 aa17.24■□□□□ 0.35
COPS7A-220ENST00000544725 PNMA2Q9UL42 364 aa17.24■□□□□ 0.35
COPS7A-220ENST00000544725 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.24■□□□□ 0.35
COPS7A-220ENST00000544725 LCTP09848 1927 aa17.23■□□□□ 0.35
COPS7A-220ENST00000544725 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.23■□□□□ 0.35
COPS7A-220ENST00000544725 B4DLN1 442 aa17.23■□□□□ 0.35
COPS7A-220ENST00000544725 NMT2O60551 498 aa17.23■□□□□ 0.35
COPS7A-220ENST00000544725 TXNP10599 105 aaKnown RBP17.23■□□□□ 0.35
COPS7A-220ENST00000544725 SELPP16109 830 aa17.23■□□□□ 0.35
COPS7A-220ENST00000544725 SLC16A2P36021 539 aa17.23■□□□□ 0.35
COPS7A-220ENST00000544725 MRPL12P52815 198 aaKnown RBP17.23■□□□□ 0.35
COPS7A-220ENST00000544725 CHMP4BP1P59074 171 aa17.23■□□□□ 0.35
COPS7A-220ENST00000544725 LEXMQ3ZCV2 418 aa17.23■□□□□ 0.35
COPS7A-220ENST00000544725 SYDE2Q5VT97 1194 aa17.23■□□□□ 0.35
COPS7A-220ENST00000544725 CNKSR3Q6P9H4 555 aa17.23■□□□□ 0.35
COPS7A-220ENST00000544725 BTNL9Q6UXG8 535 aa17.23■□□□□ 0.35
COPS7A-220ENST00000544725 SLC30A10Q6XR72 485 aa17.23■□□□□ 0.35
COPS7A-220ENST00000544725 RNF207Q6ZRF8 634 aa17.23■□□□□ 0.35
COPS7A-220ENST00000544725 FAM178BQ8IXR5 827 aa17.23■□□□□ 0.35
COPS7A-220ENST00000544725 COPS5Q92905 334 aa17.23■□□□□ 0.35
COPS7A-220ENST00000544725 RAD9AQ99638 391 aa17.23■□□□□ 0.35
COPS7A-220ENST00000544725 SUGCTQ9HAC7 445 aa17.23■□□□□ 0.35
COPS7A-220ENST00000544725 TET1Q8NFU7 2136 aa17.23■□□□□ 0.35
COPS7A-220ENST00000544725 EFCAB14O75071 495 aa17.22■□□□□ 0.35
COPS7A-220ENST00000544725 GJB5O95377 273 aa17.22■□□□□ 0.35
COPS7A-220ENST00000544725 ALADP13716 330 aa17.22■□□□□ 0.35
COPS7A-220ENST00000544725 EDNRBP24530 442 aa17.22■□□□□ 0.35
COPS7A-220ENST00000544725 ERVK-21P61565 698 aa17.22■□□□□ 0.35
COPS7A-220ENST00000544725 TSHZ3Q63HK5 1081 aa17.22■□□□□ 0.35
COPS7A-220ENST00000544725 TTBK2Q6IQ55 1244 aa17.22■□□□□ 0.35
COPS7A-220ENST00000544725 LRRC8DQ7L1W4 858 aa17.22■□□□□ 0.35
COPS7A-220ENST00000544725 TMCO2Q7Z6W1 182 aaPredicted RBP17.22■□□□□ 0.35
COPS7A-220ENST00000544725 SESTD1Q86VW0 696 aa17.22■□□□□ 0.35
COPS7A-220ENST00000544725 DNERQ8NFT8 737 aa17.22■□□□□ 0.35
COPS7A-220ENST00000544725 SEC62Q99442 399 aaKnown RBP17.22■□□□□ 0.35
COPS7A-220ENST00000544725 MTUS1Q9ULD2 1270 aa17.22■□□□□ 0.35
COPS7A-220ENST00000544725 COL4A4P53420 1690 aaPredicted RBP17.22■□□□□ 0.35
COPS7A-220ENST00000544725 ABHD14A-ACY1A0A1B0GW23 586 aa17.21■□□□□ 0.35
COPS7A-220ENST00000544725 LINC01553A4QN01 128 aa17.21■□□□□ 0.35
COPS7A-220ENST00000544725 RANBP6O60518 1105 aaKnown RBP17.21■□□□□ 0.35
COPS7A-220ENST00000544725 KCNA5P22460 613 aa17.21■□□□□ 0.35
COPS7A-220ENST00000544725 SSTR3P32745 418 aaPredicted RBP17.21■□□□□ 0.35
COPS7A-220ENST00000544725 NOVP48745 357 aa17.21■□□□□ 0.35
COPS7A-220ENST00000544725 DEFB103AP81534 67 aa17.21■□□□□ 0.35
COPS7A-220ENST00000544725 GPNMBQ14956 572 aa17.21■□□□□ 0.35
COPS7A-220ENST00000544725 CLEC4DQ8WXI8 215 aa17.21■□□□□ 0.35
COPS7A-220ENST00000544725 CRBNQ96SW2 442 aa17.21■□□□□ 0.35
COPS7A-220ENST00000544725 CXCL10P02778 98 aa17.2■□□□□ 0.34
COPS7A-220ENST00000544725 RPS6P62753 249 aaKnown RBP17.2■□□□□ 0.34
COPS7A-220ENST00000544725 CTDSPL2Q05D32 466 aa17.2■□□□□ 0.34
COPS7A-220ENST00000544725 RBL2Q08999 1139 aa17.2■□□□□ 0.34
COPS7A-220ENST00000544725 CSPP1Q1MSJ5 1256 aa17.2■□□□□ 0.34
COPS7A-220ENST00000544725 GDF6Q6KF10 455 aaPredicted RBP17.2■□□□□ 0.34
COPS7A-220ENST00000544725 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.2■□□□□ 0.34
COPS7A-220ENST00000544725 UIMC1Q96RL1 719 aa17.2■□□□□ 0.34
COPS7A-220ENST00000544725 IKBKEQ14164 716 aa17.19■□□□□ 0.34
COPS7A-220ENST00000544725 PUS10Q3MIT2 529 aaKnown RBP17.19■□□□□ 0.34
COPS7A-220ENST00000544725 ZMYM1Q5SVZ6 1142 aa17.19■□□□□ 0.34
COPS7A-220ENST00000544725 PTCRAQ6ISU1 281 aaPredicted RBP17.19■□□□□ 0.34
COPS7A-220ENST00000544725 AFG1LQ8WV93 481 aa17.19■□□□□ 0.34
COPS7A-220ENST00000544725 DHX38Q92620 1227 aaKnown RBP17.19■□□□□ 0.34
COPS7A-220ENST00000544725 CTAGE1Q96RT6 745 aa17.19■□□□□ 0.34
COPS7A-220ENST00000544725 GPCPD1Q9NPB8 672 aa17.19■□□□□ 0.34
COPS7A-220ENST00000544725 INCENPQ9NQS7 918 aa17.19■□□□□ 0.34
COPS7A-220ENST00000544725 FRMPD2Q68DX3 1309 aaPredicted RBP17.19■□□□□ 0.34
COPS7A-220ENST00000544725 NBNO60934 754 aa17.18■□□□□ 0.34
COPS7A-220ENST00000544725 ARIH2O95376 493 aa17.18■□□□□ 0.34
COPS7A-220ENST00000544725 GH1P01241 217 aa17.18■□□□□ 0.34
COPS7A-220ENST00000544725 MMP3P08254 477 aa17.18■□□□□ 0.34
COPS7A-220ENST00000544725 TOP1P11387 765 aaKnown RBP17.18■□□□□ 0.34
COPS7A-220ENST00000544725 CKBP12277 381 aa17.18■□□□□ 0.34
COPS7A-220ENST00000544725 IL9P15248 144 aa17.18■□□□□ 0.34
COPS7A-220ENST00000544725 FSD1Q9BTV5 496 aa17.18■□□□□ 0.34
COPS7A-220ENST00000544725 CTNNA3Q9UI47 895 aa17.18■□□□□ 0.34
COPS7A-220ENST00000544725 ANAPC4Q9UJX5 808 aa17.18■□□□□ 0.34
COPS7A-220ENST00000544725 WDR19Q8NEZ3 1342 aa17.18■□□□□ 0.34
COPS7A-220ENST00000544725 GRXCR2A6NFK2 248 aa17.17■□□□□ 0.34
COPS7A-220ENST00000544725 ORC4O43929 436 aa17.17■□□□□ 0.34
COPS7A-220ENST00000544725 CASTP20810 708 aaKnown RBP17.17■□□□□ 0.34
COPS7A-220ENST00000544725 FAM117BQ6P1L5 589 aa17.17■□□□□ 0.34
COPS7A-220ENST00000544725 CCDC62Q6P9F0 684 aa17.17■□□□□ 0.34
COPS7A-220ENST00000544725 C7orf31Q8N865 590 aa17.17■□□□□ 0.34
COPS7A-220ENST00000544725 FBXO22Q8NEZ5 403 aa17.17■□□□□ 0.34
COPS7A-220ENST00000544725 KAT2BQ92831 832 aa17.17■□□□□ 0.34
COPS7A-220ENST00000544725 TMEM47Q9BQJ4 181 aa17.17■□□□□ 0.34
COPS7A-220ENST00000544725 GTF2IRD1Q9UHL9 959 aa17.17■□□□□ 0.34
COPS7A-220ENST00000544725 INSL6Q9Y581 213 aa17.17■□□□□ 0.34
COPS7A-220ENST00000544725 PTPRSQ13332 1948 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms