RNA–Protein interactions for RNA: ENST00000544724.5

PSMD9-211, Transcript of proteasome 26S subunit, non-ATPase 9, human

TSL 2

Gene PSMD9, Length 3,051 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD9-211	ENST00000544724	NDST4	Q9H3R1	872 aa		10.44	□□□□□ -0.74
PSMD9-211	ENST00000544724	MCM9	Q9NXL9	1143 aa		10.44	□□□□□ -0.74
PSMD9-211	ENST00000544724	PLAA	Q9Y263	795 aa		10.44	□□□□□ -0.74
PSMD9-211	ENST00000544724	TNS3	Q68CZ2	1445 aa		10.44	□□□□□ -0.74
PSMD9-211	ENST00000544724	GLI3	P10071	1580 aa		10.44	□□□□□ -0.74
PSMD9-211	ENST00000544724		A0A1W2PQC6	194 aa		10.44	□□□□□ -0.74
PSMD9-211	ENST00000544724	GOLGA8K	D6RF30	607 aa		10.44	□□□□□ -0.74
PSMD9-211	ENST00000544724	HGS	O14964	777 aa	Predicted RBP	10.44	□□□□□ -0.74
PSMD9-211	ENST00000544724	OPA1	O60313	960 aa		10.44	□□□□□ -0.74
PSMD9-211	ENST00000544724	CP	P00450	1065 aa		10.44	□□□□□ -0.74
PSMD9-211	ENST00000544724	GNAT2	P19087	354 aa		10.44	□□□□□ -0.74
PSMD9-211	ENST00000544724	KLRC1	P26715	233 aa		10.44	□□□□□ -0.74
PSMD9-211	ENST00000544724	COPB2	P35606	906 aa		10.44	□□□□□ -0.74
PSMD9-211	ENST00000544724	PFKFB3	Q16875	520 aa	Predicted RBP	10.44	□□□□□ -0.74
PSMD9-211	ENST00000544724	ODF2	Q5BJF6	829 aa		10.44	□□□□□ -0.74
PSMD9-211	ENST00000544724	MMGT1	Q8N4V1	131 aa		10.44	□□□□□ -0.74
PSMD9-211	ENST00000544724	UHMK1	Q8TAS1	419 aa	Known RBP	10.44	□□□□□ -0.74
PSMD9-211	ENST00000544724	ACSBG1	Q96GR2	724 aa		10.44	□□□□□ -0.74
PSMD9-211	ENST00000544724	ZNF512B	Q96KM6	892 aa	Predicted RBP	10.44	□□□□□ -0.74
PSMD9-211	ENST00000544724	FGFBP2	Q9BYJ0	223 aa		10.44	□□□□□ -0.74
PSMD9-211	ENST00000544724	THAP9	Q9H5L6	903 aa		10.44	□□□□□ -0.74
PSMD9-211	ENST00000544724	BIN2	Q9UBW5	565 aa	Predicted RBP	10.44	□□□□□ -0.74
PSMD9-211	ENST00000544724	ADAMTS1	Q9UHI8	967 aa		10.44	□□□□□ -0.74
PSMD9-211	ENST00000544724	SAP30BP	Q9UHR5	308 aa	Known RBP	10.44	□□□□□ -0.74
PSMD9-211	ENST00000544724	PCDHA6	Q9UN73	950 aa		10.44	□□□□□ -0.74
PSMD9-211	ENST00000544724	PCDHA8	Q9Y5H6	950 aa		10.44	□□□□□ -0.74
PSMD9-211	ENST00000544724	MROH5	Q6ZUA9	1318 aa		10.44	□□□□□ -0.74
PSMD9-211	ENST00000544724	POTEM	A6NI47	508 aa		10.44	□□□□□ -0.74
PSMD9-211	ENST00000544724	RAD51C	O43502	376 aa		10.44	□□□□□ -0.74
PSMD9-211	ENST00000544724	CYTH3	O43739	400 aa		10.44	□□□□□ -0.74
PSMD9-211	ENST00000544724	IGHMBP2	P38935	993 aa	Known RBP	10.44	□□□□□ -0.74
PSMD9-211	ENST00000544724	MDM1	Q8TC05	714 aa		10.44	□□□□□ -0.74
PSMD9-211	ENST00000544724	GGT7	Q9UJ14	662 aa		10.44	□□□□□ -0.74
PSMD9-211	ENST00000544724	TMEM94	Q12767	1356 aa		10.43	□□□□□ -0.74
PSMD9-211	ENST00000544724	PNPLA7	Q6ZV29	1317 aa		10.43	□□□□□ -0.74
PSMD9-211	ENST00000544724	EIF4E1B	A6NMX2	242 aa	Known RBP	10.43	□□□□□ -0.74
PSMD9-211	ENST00000544724	MEFV	O15553	781 aa	Predicted RBP	10.43	□□□□□ -0.74
PSMD9-211	ENST00000544724	RPSA	P08865	295 aa	Known RBP	10.43	□□□□□ -0.74
PSMD9-211	ENST00000544724	CYP19A1	P11511	503 aa	Predicted RBP	10.43	□□□□□ -0.74
PSMD9-211	ENST00000544724	CCNE1	P24864	410 aa		10.43	□□□□□ -0.74
PSMD9-211	ENST00000544724	CDC25C	P30307	473 aa		10.43	□□□□□ -0.74
PSMD9-211	ENST00000544724	LONP1	P36776	959 aa	Known RBP	10.43	□□□□□ -0.74
PSMD9-211	ENST00000544724	CCDC91	Q7Z6B0	441 aa		10.43	□□□□□ -0.74
PSMD9-211	ENST00000544724	TICAM2	Q86XR7	235 aa		10.43	□□□□□ -0.74
PSMD9-211	ENST00000544724	SUGP1	Q8IWZ8	645 aa	Known RBP	10.43	□□□□□ -0.74
PSMD9-211	ENST00000544724	TBC1D5	Q92609	795 aa		10.43	□□□□□ -0.74
PSMD9-211	ENST00000544724	ALS2CR12	Q96Q35	445 aa		10.43	□□□□□ -0.74
PSMD9-211	ENST00000544724	PURB	Q96QR8	312 aa	Known RBP	10.43	□□□□□ -0.74
PSMD9-211	ENST00000544724	ZHX3	Q9H4I2	956 aa		10.43	□□□□□ -0.74
PSMD9-211	ENST00000544724	KCP	Q6ZWJ8	1503 aa		10.43	□□□□□ -0.74
PSMD9-211	ENST00000544724	BAZ2A	Q9UIF9	1905 aa	Known RBP	10.43	□□□□□ -0.74
PSMD9-211	ENST00000544724	PHF20L1	A8MW92	1017 aa		10.43	□□□□□ -0.74
PSMD9-211	ENST00000544724	RHOBTB3	O94955	611 aa		10.43	□□□□□ -0.74
PSMD9-211	ENST00000544724	BMP15	O95972	392 aa		10.43	□□□□□ -0.74
PSMD9-211	ENST00000544724	FNTA	P49354	379 aa		10.43	□□□□□ -0.74
PSMD9-211	ENST00000544724	POLR2F	P61218	127 aa	Known RBP	10.43	□□□□□ -0.74
PSMD9-211	ENST00000544724	IQCE	Q6IPM2	695 aa		10.43	□□□□□ -0.74
PSMD9-211	ENST00000544724	RCSD1	Q6JBY9	416 aa		10.43	□□□□□ -0.74
PSMD9-211	ENST00000544724	MYCBPAP	Q8TBZ2	947 aa		10.43	□□□□□ -0.74
PSMD9-211	ENST00000544724	UBA5	Q9GZZ9	404 aa		10.43	□□□□□ -0.74
PSMD9-211	ENST00000544724	NEUROG2	Q9H2A3	272 aa		10.43	□□□□□ -0.74
PSMD9-211	ENST00000544724	IL17RB	Q9NRM6	502 aa		10.43	□□□□□ -0.74
PSMD9-211	ENST00000544724	HAUS2	Q9NVX0	235 aa		10.43	□□□□□ -0.74
PSMD9-211	ENST00000544724	MYH7	P12883	1935 aa		10.43	□□□□□ -0.74
PSMD9-211	ENST00000544724	ANO9	A1A5B4	782 aa		10.42	□□□□□ -0.74
PSMD9-211	ENST00000544724	SKAP2	O75563	359 aa	Predicted RBP	10.42	□□□□□ -0.74
PSMD9-211	ENST00000544724	RAPGEF1	Q13905	1077 aa		10.42	□□□□□ -0.74
PSMD9-211	ENST00000544724	VWA3B	Q502W6	1294 aa		10.42	□□□□□ -0.74
PSMD9-211	ENST00000544724	GBP6	Q6ZN66	633 aa		10.42	□□□□□ -0.74
PSMD9-211	ENST00000544724	NLRP14	Q86W24	1093 aa		10.42	□□□□□ -0.74
PSMD9-211	ENST00000544724	POTED	Q86YR6	584 aa		10.42	□□□□□ -0.74
PSMD9-211	ENST00000544724	KSR1	Q8IVT5	923 aa		10.42	□□□□□ -0.74
PSMD9-211	ENST00000544724	CCDC13	Q8IYE1	715 aa		10.42	□□□□□ -0.74
PSMD9-211	ENST00000544724	FAM133A	Q8N9E0	248 aa		10.42	□□□□□ -0.74
PSMD9-211	ENST00000544724	PNMA1	Q8ND90	353 aa		10.42	□□□□□ -0.74
PSMD9-211	ENST00000544724	TBC1D31	Q96DN5	1066 aa		10.42	□□□□□ -0.74
PSMD9-211	ENST00000544724	CABS1	Q96KC9	395 aa		10.42	□□□□□ -0.74
PSMD9-211	ENST00000544724	RPGRIP1	Q96KN7	1286 aa		10.42	□□□□□ -0.74
PSMD9-211	ENST00000544724	KBTBD4	Q9NVX7	518 aa		10.42	□□□□□ -0.74
PSMD9-211	ENST00000544724	PLAGL2	Q9UPG8	496 aa		10.42	□□□□□ -0.74
PSMD9-211	ENST00000544724	NIP7	Q9Y221	180 aa	Known RBP eCLIP	10.42	□□□□□ -0.74
PSMD9-211	ENST00000544724	DDX60	Q8IY21	1712 aa	Known RBP	10.42	□□□□□ -0.74
PSMD9-211	ENST00000544724	MYMK	A6NI61	221 aa		10.42	□□□□□ -0.74
PSMD9-211	ENST00000544724	KCNK3	O14649	394 aa		10.42	□□□□□ -0.74
PSMD9-211	ENST00000544724	MYCN	P04198	464 aa	Predicted RBP	10.42	□□□□□ -0.74
PSMD9-211	ENST00000544724	ACTN1	P12814	892 aa		10.42	□□□□□ -0.74
PSMD9-211	ENST00000544724	MECOM	Q03112	1051 aa		10.42	□□□□□ -0.74
PSMD9-211	ENST00000544724	LLGL1	Q15334	1064 aa		10.42	□□□□□ -0.74
PSMD9-211	ENST00000544724	PTGIS	Q16647	500 aa		10.42	□□□□□ -0.74
PSMD9-211	ENST00000544724	KCNK18	Q7Z418	384 aa		10.42	□□□□□ -0.74
PSMD9-211	ENST00000544724	CCDC170	Q8IYT3	715 aa		10.42	□□□□□ -0.74
PSMD9-211	ENST00000544724	FNBP4	Q8N3X1	1017 aa	Predicted RBP	10.42	□□□□□ -0.74
PSMD9-211	ENST00000544724	NOC3L	Q8WTT2	800 aa	Known RBP	10.42	□□□□□ -0.74
PSMD9-211	ENST00000544724	UBLCP1	Q8WVY7	318 aa	Predicted RBP	10.42	□□□□□ -0.74
PSMD9-211	ENST00000544724	DDX47	Q9H0S4	455 aa	Known RBP	10.42	□□□□□ -0.74
PSMD9-211	ENST00000544724	DPH5	Q9H2P9	285 aa		10.42	□□□□□ -0.74
PSMD9-211	ENST00000544724	DCP1A	Q9NPI6	582 aa	Predicted RBP	10.42	□□□□□ -0.74
PSMD9-211	ENST00000544724	RBM28	Q9NW13	759 aa	Known RBP	10.42	□□□□□ -0.74
PSMD9-211	ENST00000544724	PCDHA4	Q9UN74	947 aa		10.42	□□□□□ -0.74
PSMD9-211	ENST00000544724	BCL9L	Q86UU0	1499 aa		10.42	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms