RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 CUL5Q93034 780 aa14.51□□□□□ -0.09
CPSF7-223ENST00000544669 ALS2CR12Q96Q35 445 aa14.51□□□□□ -0.09
CPSF7-223ENST00000544669 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.51□□□□□ -0.09
CPSF7-223ENST00000544669 TSKSQ9UJT2 592 aa14.51□□□□□ -0.09
CPSF7-223ENST00000544669 JAG2Q9Y219 1238 aa14.51□□□□□ -0.09
CPSF7-223ENST00000544669 JRKLQ9Y4A0 524 aa14.51□□□□□ -0.09
CPSF7-223ENST00000544669 HLA-DOAP06340 250 aa14.5□□□□□ -0.09
CPSF7-223ENST00000544669 GOLGA8HP0CJ92 632 aa14.5□□□□□ -0.09
CPSF7-223ENST00000544669 TXKP42681 527 aa14.5□□□□□ -0.09
CPSF7-223ENST00000544669 PMS1P54277 932 aaKnown RBP14.5□□□□□ -0.09
CPSF7-223ENST00000544669 STK4Q13043 487 aa14.5□□□□□ -0.09
CPSF7-223ENST00000544669 SLC35G1Q2M3R5 365 aa14.5□□□□□ -0.09
CPSF7-223ENST00000544669 WDR59Q6PJI9 974 aa14.5□□□□□ -0.09
CPSF7-223ENST00000544669 SP8Q8IXZ3 490 aa14.5□□□□□ -0.09
CPSF7-223ENST00000544669 SLC44A5Q8NCS7 719 aa14.5□□□□□ -0.09
CPSF7-223ENST00000544669 SYN2Q92777 582 aaPredicted RBP14.5□□□□□ -0.09
CPSF7-223ENST00000544669 SECISBP2LQ93073 1101 aaKnown RBP14.5□□□□□ -0.09
CPSF7-223ENST00000544669 C8orf37Q96NL8 207 aa14.5□□□□□ -0.09
CPSF7-223ENST00000544669 TMX4Q9H1E5 349 aaPredicted RBP14.5□□□□□ -0.09
CPSF7-223ENST00000544669 NDST4Q9H3R1 872 aa14.5□□□□□ -0.09
CPSF7-223ENST00000544669 RNF14Q9UBS8 474 aa14.5□□□□□ -0.09
CPSF7-223ENST00000544669 SNED1Q8TER0 1413 aa14.5□□□□□ -0.09
CPSF7-223ENST00000544669 SPATA31A6Q5VVP1 1343 aa14.5□□□□□ -0.09
CPSF7-223ENST00000544669 TNRC6CQ9HCJ0 1690 aaKnown RBP14.5□□□□□ -0.09
CPSF7-223ENST00000544669 MARCH6O60337 910 aa14.5□□□□□ -0.09
CPSF7-223ENST00000544669 SLC27A3Q5K4L6 730 aa14.5□□□□□ -0.09
CPSF7-223ENST00000544669 GOLGA6L1Q8N7Z2 621 aa14.5□□□□□ -0.09
CPSF7-223ENST00000544669 FAM71BQ8TC56 605 aa14.5□□□□□ -0.09
CPSF7-223ENST00000544669 RAD54LQ92698 747 aa14.5□□□□□ -0.09
CPSF7-223ENST00000544669 CEP63Q96MT8 703 aa14.5□□□□□ -0.09
CPSF7-223ENST00000544669 PURBQ96QR8 312 aaKnown RBP14.5□□□□□ -0.09
CPSF7-223ENST00000544669 BIN2Q9UBW5 565 aaPredicted RBP14.5□□□□□ -0.09
CPSF7-223ENST00000544669 RNF225M0QZC1 329 aaPredicted RBP14.49□□□□□ -0.09
CPSF7-223ENST00000544669 ADAMTS3O15072 1205 aa14.49□□□□□ -0.09
CPSF7-223ENST00000544669 SASH3O75995 380 aa14.49□□□□□ -0.09
CPSF7-223ENST00000544669 LCA5LO95447 670 aa14.49□□□□□ -0.09
CPSF7-223ENST00000544669 SERPINB2P05120 415 aa14.49□□□□□ -0.09
CPSF7-223ENST00000544669 TCP1P17987 556 aaKnown RBP14.49□□□□□ -0.09
CPSF7-223ENST00000544669 USP14P54578 494 aa14.49□□□□□ -0.09
CPSF7-223ENST00000544669 GABPAQ06546 454 aa14.49□□□□□ -0.09
CPSF7-223ENST00000544669 FAM196AQ6ZSG2 479 aa14.49□□□□□ -0.09
CPSF7-223ENST00000544669 RNF10Q8N5U6 811 aaKnown RBP14.49□□□□□ -0.09
CPSF7-223ENST00000544669 TBC1D16Q8TBP0 767 aa14.49□□□□□ -0.09
CPSF7-223ENST00000544669 DEF6Q9H4E7 631 aa14.49□□□□□ -0.09
CPSF7-223ENST00000544669 ZSWIM4Q9H7M6 989 aa14.49□□□□□ -0.09
CPSF7-223ENST00000544669 VAT1LQ9HCJ6 419 aa14.49□□□□□ -0.09
CPSF7-223ENST00000544669 REXO2Q9Y3B8 237 aaKnown RBP14.49□□□□□ -0.09
CPSF7-223ENST00000544669 TAF1P21675 1872 aa14.48□□□□□ -0.09
CPSF7-223ENST00000544669 IGKV6D-41A0A0C4DH26 115 aa14.48□□□□□ -0.09
CPSF7-223ENST00000544669 SSU72P8A0A1W2PR75 194 aa14.48□□□□□ -0.09
CPSF7-223ENST00000544669 KLRG2A4D1S0 409 aaPredicted RBP14.48□□□□□ -0.09
CPSF7-223ENST00000544669 USP17L5A8MUK1 530 aa14.48□□□□□ -0.09
CPSF7-223ENST00000544669 POLR3GO15318 223 aaPredicted RBP14.48□□□□□ -0.09
CPSF7-223ENST00000544669 USP11P51784 963 aa14.48□□□□□ -0.09
CPSF7-223ENST00000544669 KCNQ4P56696 695 aa14.48□□□□□ -0.09
CPSF7-223ENST00000544669 HERVK_113P62684 666 aa14.48□□□□□ -0.09
CPSF7-223ENST00000544669 FKBP3Q00688 224 aaKnown RBP14.48□□□□□ -0.09
CPSF7-223ENST00000544669 TRAF1Q13077 416 aa14.48□□□□□ -0.09
CPSF7-223ENST00000544669 GRB10Q13322 594 aa14.48□□□□□ -0.09
CPSF7-223ENST00000544669 SLC4A8Q2Y0W8 1093 aa14.48□□□□□ -0.09
CPSF7-223ENST00000544669 MIIPQ5JXC2 388 aa14.48□□□□□ -0.09
CPSF7-223ENST00000544669 HYIQ5T013 277 aa14.48□□□□□ -0.09
CPSF7-223ENST00000544669 MOXD1Q6UVY6 613 aa14.48□□□□□ -0.09
CPSF7-223ENST00000544669 PPP4R3CPQ6ZMV5 832 aa14.48□□□□□ -0.09
CPSF7-223ENST00000544669 CCDC65Q8IXS2 484 aa14.48□□□□□ -0.09
CPSF7-223ENST00000544669 MYOCDQ8IZQ8 938 aa14.48□□□□□ -0.09
CPSF7-223ENST00000544669 SNX29Q8TEQ0 813 aa14.48□□□□□ -0.09
CPSF7-223ENST00000544669 PLIN2Q99541 437 aa14.48□□□□□ -0.09
CPSF7-223ENST00000544669 MMTAG2Q9BU76 263 aaKnown RBP14.48□□□□□ -0.09
CPSF7-223ENST00000544669 SERPINB13Q9UIV8 391 aa14.48□□□□□ -0.09
CPSF7-223ENST00000544669 USP21Q9UK80 565 aa14.48□□□□□ -0.09
CPSF7-223ENST00000544669 FAM184BQ9ULE4 1060 aa14.48□□□□□ -0.09
CPSF7-223ENST00000544669 MTMR7Q9Y216 660 aa14.48□□□□□ -0.09
CPSF7-223ENST00000544669 COBLO75128 1261 aa14.48□□□□□ -0.09
CPSF7-223ENST00000544669 ZNF543Q08ER8 600 aa14.48□□□□□ -0.09
CPSF7-223ENST00000544669 SF3B2Q13435 895 aaKnown RBP14.48□□□□□ -0.09
CPSF7-223ENST00000544669 TMEM119Q4V9L6 283 aa14.48□□□□□ -0.09
CPSF7-223ENST00000544669 POTEDQ86YR6 584 aa14.48□□□□□ -0.09
CPSF7-223ENST00000544669 SLFN12Q8IYM2 578 aa14.48□□□□□ -0.09
CPSF7-223ENST00000544669 NEK11Q8NG66 645 aa14.48□□□□□ -0.09
CPSF7-223ENST00000544669 CAGE1Q8TC20 777 aa14.48□□□□□ -0.09
CPSF7-223ENST00000544669 MRIQ9BWK5 157 aa14.48□□□□□ -0.09
CPSF7-223ENST00000544669 TSPYL1Q9H0U9 437 aa14.48□□□□□ -0.09
CPSF7-223ENST00000544669 EHD4Q9H223 541 aa14.48□□□□□ -0.09
CPSF7-223ENST00000544669 ABCB6Q9NP58 842 aa14.48□□□□□ -0.09
CPSF7-223ENST00000544669 BTAF1O14981 1849 aa14.47□□□□□ -0.09
CPSF7-223ENST00000544669 C6orf229H3BNL8 230 aa14.47□□□□□ -0.09
CPSF7-223ENST00000544669 ZBTB5O15062 677 aa14.47□□□□□ -0.09
CPSF7-223ENST00000544669 MUM1L1Q5H9M0 696 aa14.47□□□□□ -0.09
CPSF7-223ENST00000544669 HHIPL2Q6UWX4 724 aa14.47□□□□□ -0.09
CPSF7-223ENST00000544669 CCDC24Q8N4L8 307 aa14.47□□□□□ -0.09
CPSF7-223ENST00000544669 IFIH1Q9BYX4 1025 aaKnown RBP14.47□□□□□ -0.09
CPSF7-223ENST00000544669 SEMA6BQ9H3T3 888 aa14.47□□□□□ -0.09
CPSF7-223ENST00000544669 BLOC1S4Q9NUP1 217 aa14.47□□□□□ -0.09
CPSF7-223ENST00000544669 AGPAT5Q9NUQ2 364 aa14.47□□□□□ -0.09
CPSF7-223ENST00000544669 PCDHA12Q9UN75 941 aa14.47□□□□□ -0.09
CPSF7-223ENST00000544669 DAGLAQ9Y4D2 1042 aa14.47□□□□□ -0.09
CPSF7-223ENST00000544669 MYMKA6NI61 221 aa14.46□□□□□ -0.09
CPSF7-223ENST00000544669 AKR1B10O60218 316 aa14.46□□□□□ -0.09
CPSF7-223ENST00000544669 CLSTN1O94985 981 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms