RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 VGLL2Q8N8G2 317 aa5.06□□□□□ -1.6
SNHG1-220ENST00000544550 SLC44A5Q8NCS7 719 aa5.06□□□□□ -1.6
SNHG1-220ENST00000544550 PSMG3-AS1Q96PY0 264 aa5.06□□□□□ -1.6
SNHG1-220ENST00000544550 ZDHHC3Q9NYG2 299 aa5.06□□□□□ -1.6
SNHG1-220ENST00000544550 FLRT1Q9NZU1 646 aa5.06□□□□□ -1.6
SNHG1-220ENST00000544550 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.06□□□□□ -1.6
SNHG1-220ENST00000544550 NRBP1Q9UHY1 535 aa5.06□□□□□ -1.6
SNHG1-220ENST00000544550 DENND2AQ9ULE3 1009 aa5.06□□□□□ -1.6
SNHG1-220ENST00000544550 PHF24Q9UPV7 400 aa5.06□□□□□ -1.6
SNHG1-220ENST00000544550 ZNF521Q96K83 1311 aa5.05□□□□□ -1.6
SNHG1-220ENST00000544550 TTLL8A6PVC2 850 aa5.05□□□□□ -1.6
SNHG1-220ENST00000544550 STRNO43815 780 aa5.05□□□□□ -1.6
SNHG1-220ENST00000544550 ALDH1L1O75891 902 aa5.05□□□□□ -1.6
SNHG1-220ENST00000544550 RARBP10826 455 aa5.05□□□□□ -1.6
SNHG1-220ENST00000544550 ALADP13716 330 aa5.05□□□□□ -1.6
SNHG1-220ENST00000544550 FGFR2P21802 821 aa5.05□□□□□ -1.6
SNHG1-220ENST00000544550 BRD2P25440 801 aaKnown RBP5.05□□□□□ -1.6
SNHG1-220ENST00000544550 CYP2C19P33261 490 aa5.05□□□□□ -1.6
SNHG1-220ENST00000544550 BTDP43251 543 aa5.05□□□□□ -1.6
SNHG1-220ENST00000544550 PHKA2P46019 1235 aa5.05□□□□□ -1.6
SNHG1-220ENST00000544550 KCNQ1P51787 676 aa5.05□□□□□ -1.6
SNHG1-220ENST00000544550 NHLH1Q02575 133 aa5.05□□□□□ -1.6
SNHG1-220ENST00000544550 TFF2Q03403 129 aa5.05□□□□□ -1.6
SNHG1-220ENST00000544550 LRRC24Q50LG9 513 aa5.05□□□□□ -1.6
SNHG1-220ENST00000544550 FAM26DQ5JW98 314 aa5.05□□□□□ -1.6
SNHG1-220ENST00000544550 TMEM240Q5SV17 173 aa5.05□□□□□ -1.6
SNHG1-220ENST00000544550 RASIP1Q5U651 963 aa5.05□□□□□ -1.6
SNHG1-220ENST00000544550 SPTY2D1Q68D10 685 aaPredicted RBP5.05□□□□□ -1.6
SNHG1-220ENST00000544550 PRICKLE2Q7Z3G6 844 aa5.05□□□□□ -1.6
SNHG1-220ENST00000544550 NUP133Q8WUM0 1156 aa5.05□□□□□ -1.6
SNHG1-220ENST00000544550 FOXD4L4Q8WXT5 416 aaPredicted RBP5.05□□□□□ -1.6
SNHG1-220ENST00000544550 FERMT2Q96AC1 680 aa5.05□□□□□ -1.6
SNHG1-220ENST00000544550 ZFP42Q96MM3 310 aa5.05□□□□□ -1.6
SNHG1-220ENST00000544550 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.05□□□□□ -1.61e-17■■■□□ 16.6
SNHG1-220ENST00000544550 DHX36Q9H2U1 1008 aaKnown RBP5.05□□□□□ -1.6
SNHG1-220ENST00000544550 C11orf16Q9NQ32 467 aa5.05□□□□□ -1.6
SNHG1-220ENST00000544550 XPNPEP3Q9NQH7 507 aa5.05□□□□□ -1.6
SNHG1-220ENST00000544550 DDX4Q9NQI0 724 aaKnown RBP5.05□□□□□ -1.6
SNHG1-220ENST00000544550 DCTN4Q9UJW0 460 aa5.05□□□□□ -1.6
SNHG1-220ENST00000544550 ADAMTS8Q9UP79 889 aa5.05□□□□□ -1.6
SNHG1-220ENST00000544550 A0A1B0GUL6 1792 aa5.05□□□□□ -1.6
SNHG1-220ENST00000544550 LOC285556D6RIA3 1793 aa5.05□□□□□ -1.6
SNHG1-220ENST00000544550 DOCK1Q14185 1865 aa5.05□□□□□ -1.6
SNHG1-220ENST00000544550 MROH7-TTC4A0A0A0MT08 1334 aa5.04□□□□□ -1.6
SNHG1-220ENST00000544550 A0A1W2PQ45 241 aaPredicted RBP5.04□□□□□ -1.6
SNHG1-220ENST00000544550 A0A1W2PQY0 241 aa5.04□□□□□ -1.6
SNHG1-220ENST00000544550 FAM86C2PA6NEL3 165 aa5.04□□□□□ -1.6
SNHG1-220ENST00000544550 IGHA2P01877 340 aa5.04□□□□□ -1.6
SNHG1-220ENST00000544550 POU3F3P20264 500 aaPredicted RBP5.04□□□□□ -1.6
SNHG1-220ENST00000544550 EIF1AXP47813 144 aaKnown RBP5.04□□□□□ -1.6
SNHG1-220ENST00000544550 USP14P54578 494 aa5.04□□□□□ -1.6
SNHG1-220ENST00000544550 GSTO1P78417 241 aa5.04□□□□□ -1.6
SNHG1-220ENST00000544550 FAAP100Q0VG06 881 aa5.04□□□□□ -1.6
SNHG1-220ENST00000544550 RABL6Q3YEC7 729 aaPredicted RBP5.04□□□□□ -1.6
SNHG1-220ENST00000544550 ALKBH2Q6NS38 261 aa5.04□□□□□ -1.6
SNHG1-220ENST00000544550 LBX2Q6XYB7 198 aa5.04□□□□□ -1.6
SNHG1-220ENST00000544550 TRPV1Q8NER1 839 aa5.04□□□□□ -1.6
SNHG1-220ENST00000544550 NPLOC4Q8TAT6 608 aa5.04□□□□□ -1.6
SNHG1-220ENST00000544550 SUCLG2Q96I99 432 aa5.04□□□□□ -1.6
SNHG1-220ENST00000544550 C12orf42Q96LP6 360 aa5.04□□□□□ -1.6
SNHG1-220ENST00000544550 SRCIN1Q9C0H9 1055 aa5.04□□□□□ -1.6
SNHG1-220ENST00000544550 NKX2-4Q9H2Z4 354 aa5.04□□□□□ -1.6
SNHG1-220ENST00000544550 STARD7Q9NQZ5 370 aa5.04□□□□□ -1.6
SNHG1-220ENST00000544550 KLK14Q9P0G3 267 aa5.04□□□□□ -1.6
SNHG1-220ENST00000544550 PI4KBQ9UBF8 816 aa5.04□□□□□ -1.6
SNHG1-220ENST00000544550 GPC6Q9Y625 555 aaPredicted RBP5.04□□□□□ -1.6
SNHG1-220ENST00000544550 DOCK2Q92608 1830 aa5.04□□□□□ -1.6
SNHG1-220ENST00000544550 EYSQ5T1H1 3165 aa5.04□□□□□ -1.6
SNHG1-220ENST00000544550 ROBO3Q96MS0 1386 aa5.04□□□□□ -1.6
SNHG1-220ENST00000544550 PDS5AQ29RF7 1337 aaKnown RBP5.03□□□□□ -1.6
SNHG1-220ENST00000544550 PLXNB2O15031 1838 aa5.03□□□□□ -1.6
SNHG1-220ENST00000544550 GPR75-ASB3A0A0A6YYF3 556 aa5.03□□□□□ -1.6
SNHG1-220ENST00000544550 GRXCR1A8MXD5 290 aa5.03□□□□□ -1.6
SNHG1-220ENST00000544550 F6X3S4 739 aa5.03□□□□□ -1.6
SNHG1-220ENST00000544550 APAF1O14727 1248 aa5.03□□□□□ -1.6
SNHG1-220ENST00000544550 ZBTB39O15060 712 aa5.03□□□□□ -1.6
SNHG1-220ENST00000544550 TLR3O15455 904 aaKnown RBP5.03□□□□□ -1.6
SNHG1-220ENST00000544550 FZD6O60353 706 aa5.03□□□□□ -1.6
SNHG1-220ENST00000544550 PEX10O60683 326 aa5.03□□□□□ -1.6
SNHG1-220ENST00000544550 CNMDO75829 334 aa5.03□□□□□ -1.6
SNHG1-220ENST00000544550 LDHCP07864 332 aa5.03□□□□□ -1.6
SNHG1-220ENST00000544550 SLURP2P0DP57 97 aa5.03□□□□□ -1.6
SNHG1-220ENST00000544550 ATP4AP20648 1035 aa5.03□□□□□ -1.6
SNHG1-220ENST00000544550 ADORA2AP29274 412 aa5.03□□□□□ -1.6
SNHG1-220ENST00000544550 FAM47AQ5JRC9 791 aa5.03□□□□□ -1.6
SNHG1-220ENST00000544550 ANO1Q5XXA6 986 aa5.03□□□□□ -1.6
SNHG1-220ENST00000544550 ATF7IPQ6VMQ6 1270 aa5.03□□□□□ -1.6
SNHG1-220ENST00000544550 ZNF365Q70YC5 407 aa5.03□□□□□ -1.6
SNHG1-220ENST00000544550 ETFBKMTQ8IXQ9 262 aa5.03□□□□□ -1.6
SNHG1-220ENST00000544550 ABRAQ8N0Z2 381 aa5.03□□□□□ -1.6
SNHG1-220ENST00000544550 SHCBP1Q8NEM2 672 aa5.03□□□□□ -1.6
SNHG1-220ENST00000544550 TSR2Q969E8 191 aaKnown RBP5.03□□□□□ -1.6
SNHG1-220ENST00000544550 IFT43Q96FT9 208 aa5.03□□□□□ -1.6
SNHG1-220ENST00000544550 FBXL18Q96ME1 805 aa5.03□□□□□ -1.6
SNHG1-220ENST00000544550 ASB16Q96NS5 453 aa5.03□□□□□ -1.6
SNHG1-220ENST00000544550 UIMC1Q96RL1 719 aa5.03□□□□□ -1.6
SNHG1-220ENST00000544550 FEZ1Q99689 392 aa5.03□□□□□ -1.6
SNHG1-220ENST00000544550 RBCK1Q9BYM8 510 aa5.03□□□□□ -1.6
SNHG1-220ENST00000544550 BICC1Q9H694 974 aaKnown RBP5.03□□□□□ -1.6
SNHG1-220ENST00000544550 TBX21Q9UL17 535 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms