RNA–Protein interactions for RNA: ENST00000544474.5

PDZD4-209, Transcript of PDZ domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene PDZD4, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-209ENST00000544474 HOMER3Q9NSC5 361 aa14.15□□□□□ -0.14
PDZD4-209ENST00000544474 ACTN4O43707 911 aaKnown RBP14.15□□□□□ -0.14
PDZD4-209ENST00000544474 MARCH6O60337 910 aa14.15□□□□□ -0.14
PDZD4-209ENST00000544474 ITGA6P23229 1130 aa14.15□□□□□ -0.14
PDZD4-209ENST00000544474 SLCO1A2P46721 670 aa14.15□□□□□ -0.14
PDZD4-209ENST00000544474 UBE3CQ15386 1083 aa14.15□□□□□ -0.14
PDZD4-209ENST00000544474 FAM47AQ5JRC9 791 aa14.15□□□□□ -0.14
PDZD4-209ENST00000544474 AKNAD1Q5T1N1 836 aa14.15□□□□□ -0.14
PDZD4-209ENST00000544474 IQCEQ6IPM2 695 aa14.15□□□□□ -0.14
PDZD4-209ENST00000544474 SGMS1Q86VZ5 419 aa14.15□□□□□ -0.14
PDZD4-209ENST00000544474 FAM217BQ9NTX9 383 aaPredicted RBP14.15□□□□□ -0.14
PDZD4-209ENST00000544474 TPX2Q9ULW0 747 aaKnown RBP14.15□□□□□ -0.14
PDZD4-209ENST00000544474 HYOU1Q9Y4L1 999 aa14.15□□□□□ -0.14
PDZD4-209ENST00000544474 SARSP49591 514 aaKnown RBP14.15□□□□□ -0.14
PDZD4-209ENST00000544474 THEMIS2Q5TEJ8 643 aa14.15□□□□□ -0.14
PDZD4-209ENST00000544474 MAB21L3Q8N8X9 362 aa14.15□□□□□ -0.14
PDZD4-209ENST00000544474 CCDC51Q96ER9 411 aa14.15□□□□□ -0.14
PDZD4-209ENST00000544474 YIPF3Q9GZM5 350 aa14.15□□□□□ -0.14
PDZD4-209ENST00000544474 CPVLQ9H3G5 476 aa14.15□□□□□ -0.14
PDZD4-209ENST00000544474 SLC39A2Q9NP94 309 aa14.15□□□□□ -0.14
PDZD4-209ENST00000544474 ZBTB1Q9Y2K1 713 aa14.15□□□□□ -0.14
PDZD4-209ENST00000544474 ARHGAP23Q9P227 1491 aa14.15□□□□□ -0.14
PDZD4-209ENST00000544474 MEGF6O75095 1541 aa14.14□□□□□ -0.15
PDZD4-209ENST00000544474 NKRFO15226 690 aaKnown RBP eCLIP14.14□□□□□ -0.15
PDZD4-209ENST00000544474 VIMP08670 466 aaKnown RBP14.14□□□□□ -0.15
PDZD4-209ENST00000544474 ZNF473Q8WTR7 871 aaKnown RBP14.14□□□□□ -0.15
PDZD4-209ENST00000544474 SEPT11Q9NVA2 429 aaKnown RBP14.14□□□□□ -0.15
PDZD4-209ENST00000544474 VEGFAP15692 232 aaPredicted RBP14.14□□□□□ -0.15
PDZD4-209ENST00000544474 RAB27AP51159 221 aa14.14□□□□□ -0.15
PDZD4-209ENST00000544474 GFPT1Q06210 699 aaPredicted RBP14.14□□□□□ -0.15
PDZD4-209ENST00000544474 LRRC41Q15345 812 aa14.14□□□□□ -0.15
PDZD4-209ENST00000544474 TTC38Q5R3I4 469 aa14.14□□□□□ -0.15
PDZD4-209ENST00000544474 ELOA2Q8IYF1 753 aaPredicted RBP14.14□□□□□ -0.15
PDZD4-209ENST00000544474 ZNF579Q8NAF0 562 aaKnown RBP14.14□□□□□ -0.15
PDZD4-209ENST00000544474 MAGEC3Q8TD91 643 aa14.14□□□□□ -0.15
PDZD4-209ENST00000544474 TUBGCP2Q9BSJ2 902 aa14.14□□□□□ -0.15
PDZD4-209ENST00000544474 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.14□□□□□ -0.15
PDZD4-209ENST00000544474 NOVA2Q9UNW9 492 aaKnown RBP14.14□□□□□ -0.15
PDZD4-209ENST00000544474 NMT2O60551 498 aa14.13□□□□□ -0.15
PDZD4-209ENST00000544474 CDCA2Q69YH5 1023 aaPredicted RBP14.13□□□□□ -0.15
PDZD4-209ENST00000544474 CHADLQ6NUI6 762 aa14.13□□□□□ -0.15
PDZD4-209ENST00000544474 HOOK2Q96ED9 719 aa14.13□□□□□ -0.15
PDZD4-209ENST00000544474 STRBPQ96SI9 672 aaKnown RBP14.13□□□□□ -0.15
PDZD4-209ENST00000544474 PPP1R3GB7ZBB8 358 aa14.13□□□□□ -0.15
PDZD4-209ENST00000544474 CTNNA1P35221 906 aaKnown RBP14.13□□□□□ -0.15
PDZD4-209ENST00000544474 EIF4A3P38919 411 aaKnown RBP14.13□□□□□ -0.15
PDZD4-209ENST00000544474 SPAG1Q07617 926 aa14.13□□□□□ -0.15
PDZD4-209ENST00000544474 NT5DC1Q5TFE4 455 aa14.13□□□□□ -0.15
PDZD4-209ENST00000544474 TRAPPC11Q7Z392 1133 aa14.13□□□□□ -0.15
PDZD4-209ENST00000544474 CCDC170Q8IYT3 715 aa14.13□□□□□ -0.15
PDZD4-209ENST00000544474 FUKQ8N0W3 1084 aa14.13□□□□□ -0.15
PDZD4-209ENST00000544474 ACTR5Q9H9F9 607 aaPredicted RBP14.13□□□□□ -0.15
PDZD4-209ENST00000544474 STK36Q9NRP7 1315 aa14.13□□□□□ -0.15
PDZD4-209ENST00000544474 CEP104O60308 925 aa14.13□□□□□ -0.15
PDZD4-209ENST00000544474 GLI1P08151 1106 aa14.13□□□□□ -0.15
PDZD4-209ENST00000544474 UQCRFS1P1P0C7P4 283 aa14.13□□□□□ -0.15
PDZD4-209ENST00000544474 DHX9Q08211 1270 aaKnown RBP14.13□□□□□ -0.15
PDZD4-209ENST00000544474 KRT71Q3SY84 523 aa14.13□□□□□ -0.15
PDZD4-209ENST00000544474 NLRP14Q86W24 1093 aa14.13□□□□□ -0.15
PDZD4-209ENST00000544474 TMTC2Q8N394 836 aa14.13□□□□□ -0.15
PDZD4-209ENST00000544474 CRACR2BQ8N4Y2 399 aaPredicted RBP14.13□□□□□ -0.15
PDZD4-209ENST00000544474 FANCBQ8NB91 859 aa14.13□□□□□ -0.15
PDZD4-209ENST00000544474 PIGBQ92521 554 aa14.13□□□□□ -0.15
PDZD4-209ENST00000544474 ALS2CR12Q96Q35 445 aa14.13□□□□□ -0.15
PDZD4-209ENST00000544474 GSDMAQ96QA5 445 aa14.13□□□□□ -0.15
PDZD4-209ENST00000544474 SH3GL2Q99962 352 aa14.13□□□□□ -0.15
PDZD4-209ENST00000544474 PLAAQ9Y263 795 aa14.13□□□□□ -0.15
PDZD4-209ENST00000544474 IL2RBP14784 551 aa14.12□□□□□ -0.15
PDZD4-209ENST00000544474 PDE4DQ08499 809 aa14.12□□□□□ -0.15
PDZD4-209ENST00000544474 SLC5A9Q2M3M2 681 aa14.12□□□□□ -0.15
PDZD4-209ENST00000544474 TRMT1LQ7Z2T5 733 aaKnown RBP14.12□□□□□ -0.15
PDZD4-209ENST00000544474 ZNF654Q8IZM8 581 aa14.12□□□□□ -0.15
PDZD4-209ENST00000544474 DRAXINQ8NBI3 349 aaPredicted RBP14.12□□□□□ -0.15
PDZD4-209ENST00000544474 CHCHD3Q9NX63 227 aaKnown RBP14.12□□□□□ -0.15
PDZD4-209ENST00000544474 ZC3H4Q9UPT8 1303 aaKnown RBP14.12□□□□□ -0.15
PDZD4-209ENST00000544474 RPN1P04843 607 aaKnown RBP14.12□□□□□ -0.15
PDZD4-209ENST00000544474 KRT2P35908 639 aa14.12□□□□□ -0.15
PDZD4-209ENST00000544474 TBC1D25Q3MII6 688 aa14.12□□□□□ -0.15
PDZD4-209ENST00000544474 BRINP3Q76B58 766 aa14.12□□□□□ -0.15
PDZD4-209ENST00000544474 SLC51AQ86UW1 340 aa14.12□□□□□ -0.15
PDZD4-209ENST00000544474 FAM228AQ86W67 206 aa14.12□□□□□ -0.15
PDZD4-209ENST00000544474 DYDC1Q8WWB3 177 aa14.12□□□□□ -0.15
PDZD4-209ENST00000544474 SPAG5Q96R06 1193 aa14.12□□□□□ -0.15
PDZD4-209ENST00000544474 SUDS3Q9H7L9 328 aaPredicted RBP14.12□□□□□ -0.15
PDZD4-209ENST00000544474 STIM2Q9P246 746 aa14.12□□□□□ -0.15
PDZD4-209ENST00000544474 AFDNP55196 1824 aaKnown RBP14.12□□□□□ -0.15
PDZD4-209ENST00000544474 PSMA7O14818 248 aa14.12□□□□□ -0.15
PDZD4-209ENST00000544474 COQ9O75208 318 aa14.12□□□□□ -0.15
PDZD4-209ENST00000544474 DRP2Q13474 957 aa14.12□□□□□ -0.15
PDZD4-209ENST00000544474 ACCSLQ4AC99 568 aa14.12□□□□□ -0.15
PDZD4-209ENST00000544474 CCDC25Q86WR0 208 aa14.12□□□□□ -0.15
PDZD4-209ENST00000544474 MB21D1Q8N884 522 aa14.12□□□□□ -0.15
PDZD4-209ENST00000544474 G3BP2Q9UN86 482 aaKnown RBP14.12□□□□□ -0.15
PDZD4-209ENST00000544474 KCNK3O14649 394 aa14.11□□□□□ -0.15
PDZD4-209ENST00000544474 SPRED3Q2MJR0 410 aa14.11□□□□□ -0.15
PDZD4-209ENST00000544474 CADPS2Q86UW7 1296 aa14.11□□□□□ -0.15
PDZD4-209ENST00000544474 NSMCE1Q8WV22 266 aa14.11□□□□□ -0.15
PDZD4-209ENST00000544474 PCCAP05165 728 aaPredicted RBP14.11□□□□□ -0.15
PDZD4-209ENST00000544474 SETSIPP0DME0 302 aa14.11□□□□□ -0.15
PDZD4-209ENST00000544474 COPB2P35606 906 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms