RNA–Protein interactions for RNA: ENST00000543854.5

SPPL3-208, Transcript of signal peptide peptidase like 3, humanhuman

TSL 5

Gene SPPL3, Length 508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-208ENST00000543854 A0A1W2PPC1 479 aa22.12■■□□□ 1.13
SPPL3-208ENST00000543854 RBM47A0AV96 593 aaKnown RBP22.12■■□□□ 1.13
SPPL3-208ENST00000543854 DYNC1LI2O43237 492 aaPredicted RBP22.12■■□□□ 1.13
SPPL3-208ENST00000543854 SMARCA1P28370 1054 aa22.12■■□□□ 1.13
SPPL3-208ENST00000543854 BEX3Q00994 111 aa22.12■■□□□ 1.13
SPPL3-208ENST00000543854 ARHGEF16Q5VV41 709 aa22.12■■□□□ 1.13
SPPL3-208ENST00000543854 SYNE3Q6ZMZ3 975 aa22.12■■□□□ 1.13
SPPL3-208ENST00000543854 SAMD3Q8N6K7 520 aa22.12■■□□□ 1.13
SPPL3-208ENST00000543854 TCEANC2Q96MN5 208 aa22.12■■□□□ 1.13
SPPL3-208ENST00000543854 IWS1Q96ST2 819 aa22.12■■□□□ 1.13
SPPL3-208ENST00000543854 LBHD1Q9BQE6 289 aaPredicted RBP22.12■■□□□ 1.13
SPPL3-208ENST00000543854 ELP1O95163 1332 aa22.11■■□□□ 1.13
SPPL3-208ENST00000543854 ZEB2O60315 1214 aa22.11■■□□□ 1.13
SPPL3-208ENST00000543854 PQBP1O60828 265 aaKnown RBP22.11■■□□□ 1.13
SPPL3-208ENST00000543854 PLEKHA8P1O95397 391 aa22.11■■□□□ 1.13
SPPL3-208ENST00000543854 PTGS1P23219 599 aa22.11■■□□□ 1.13
SPPL3-208ENST00000543854 HSPA4P34932 840 aa22.11■■□□□ 1.13
SPPL3-208ENST00000543854 RAB11FIP4Q86YS3 637 aa22.11■■□□□ 1.13
SPPL3-208ENST00000543854 PDLIM7Q9NR12 457 aa22.11■■□□□ 1.13
SPPL3-208ENST00000543854 PXMP2Q9NR77 195 aa22.11■■□□□ 1.13
SPPL3-208ENST00000543854 MROH7Q68CQ1 1323 aa22.1■■□□□ 1.13
SPPL3-208ENST00000543854 NKRFO15226 690 aaKnown RBP eCLIP22.1■■□□□ 1.13
SPPL3-208ENST00000543854 EIF2AK2P19525 551 aaKnown RBP22.1■■□□□ 1.13
SPPL3-208ENST00000543854 BMP8BP34820 402 aa22.1■■□□□ 1.13
SPPL3-208ENST00000543854 EXOSC10Q01780 885 aaKnown RBP22.1■■□□□ 1.13
SPPL3-208ENST00000543854 TLE2Q04725 743 aa22.1■■□□□ 1.13
SPPL3-208ENST00000543854 TMEM63BQ5T3F8 832 aa22.1■■□□□ 1.13
SPPL3-208ENST00000543854 APOA5Q6Q788 366 aa22.1■■□□□ 1.13
SPPL3-208ENST00000543854 KCNB2Q92953 911 aa22.1■■□□□ 1.13
SPPL3-208ENST00000543854 VTI1AQ96AJ9 217 aa22.1■■□□□ 1.13
SPPL3-208ENST00000543854 LAMA3Q16787 3333 aa22.09■■□□□ 1.13
SPPL3-208ENST00000543854 A0A0U1RQG5 324 aaPredicted RBP22.09■■□□□ 1.13
SPPL3-208ENST00000543854 GCOM1H8Y6P7 765 aaPredicted RBP22.09■■□□□ 1.13
SPPL3-208ENST00000543854 CLTBP09497 229 aa22.09■■□□□ 1.13
SPPL3-208ENST00000543854 POLR2MP0CAP2 368 aa22.09■■□□□ 1.13
SPPL3-208ENST00000543854 HOXA13P31271 388 aaPredicted RBP22.09■■□□□ 1.13
SPPL3-208ENST00000543854 FGD1P98174 961 aa22.09■■□□□ 1.13
SPPL3-208ENST00000543854 MDM2Q00987 491 aaPredicted RBP22.09■■□□□ 1.13
SPPL3-208ENST00000543854 TTLL4Q14679 1199 aa22.09■■□□□ 1.13
SPPL3-208ENST00000543854 STXBP2Q15833 593 aa22.09■■□□□ 1.13
SPPL3-208ENST00000543854 CXCL17Q6UXB2 119 aa22.09■■□□□ 1.13
SPPL3-208ENST00000543854 SRBD1Q8N5C6 995 aaKnown RBP22.09■■□□□ 1.13
SPPL3-208ENST00000543854 FANCBQ8NB91 859 aa22.09■■□□□ 1.13
SPPL3-208ENST00000543854 OR6J1Q8NGC5 347 aa22.09■■□□□ 1.13
SPPL3-208ENST00000543854 JAKMIP1Q96N16 626 aaKnown RBP22.09■■□□□ 1.13
SPPL3-208ENST00000543854 PCDH10Q9P2E7 1040 aa22.09■■□□□ 1.13
SPPL3-208ENST00000543854 KIAA1217Q5T5P2 1943 aa22.09■■□□□ 1.13
SPPL3-208ENST00000543854 CABYRO75952 493 aa22.08■■□□□ 1.13
SPPL3-208ENST00000543854 CPT1AP50416 773 aa22.08■■□□□ 1.13
SPPL3-208ENST00000543854 TMTC3Q6ZXV5 915 aa22.08■■□□□ 1.13
SPPL3-208ENST00000543854 ANKRD33Q7Z3H0 272 aa22.08■■□□□ 1.13
SPPL3-208ENST00000543854 UBE2OQ9C0C9 1292 aaKnown RBP22.08■■□□□ 1.13
SPPL3-208ENST00000543854 RBM28Q9NW13 759 aaKnown RBP22.08■■□□□ 1.13
SPPL3-208ENST00000543854 SNX14Q9Y5W7 946 aa22.08■■□□□ 1.13
SPPL3-208ENST00000543854 DCDC2CA8MYV0 355 aa22.07■■□□□ 1.12
SPPL3-208ENST00000543854 ZBTB43O43298 467 aa22.07■■□□□ 1.12
SPPL3-208ENST00000543854 EPB41L2O43491 1005 aaKnown RBP22.07■■□□□ 1.12
SPPL3-208ENST00000543854 TXNP10599 105 aaKnown RBP22.07■■□□□ 1.12
SPPL3-208ENST00000543854 FXR1P51114 621 aaKnown RBP eCLIP22.07■■□□□ 1.12
SPPL3-208ENST00000543854 BLOC1S2Q6QNY1 142 aa22.07■■□□□ 1.12
SPPL3-208ENST00000543854 SEPT14Q6ZU15 432 aa22.07■■□□□ 1.12
SPPL3-208ENST00000543854 CMTR1Q8N1G2 835 aaKnown RBP22.07■■□□□ 1.12
SPPL3-208ENST00000543854 NR3C2P08235 984 aa22.06■■□□□ 1.12
SPPL3-208ENST00000543854 RTN1Q16799 776 aa22.06■■□□□ 1.12
SPPL3-208ENST00000543854 BRDTQ58F21 947 aaPredicted RBP22.06■■□□□ 1.12
SPPL3-208ENST00000543854 TOX2Q96NM4 488 aa22.06■■□□□ 1.12
SPPL3-208ENST00000543854 PDCD2LQ9BRP1 358 aa22.06■■□□□ 1.12
SPPL3-208ENST00000543854 BRPF3Q9ULD4 1205 aa22.06■■□□□ 1.12
SPPL3-208ENST00000543854 KLF18A0A0U1RQI7 1052 aa22.05■■□□□ 1.12
SPPL3-208ENST00000543854 ARVCFO00192 962 aa22.05■■□□□ 1.12
SPPL3-208ENST00000543854 EIF3JO75822 258 aaKnown RBP22.05■■□□□ 1.12
SPPL3-208ENST00000543854 ARIH2O95376 493 aa22.05■■□□□ 1.12
SPPL3-208ENST00000543854 SLC34A2O95436 690 aa22.05■■□□□ 1.12
SPPL3-208ENST00000543854 SH3RF1Q7Z6J0 888 aa22.05■■□□□ 1.12
SPPL3-208ENST00000543854 FCHSD1Q86WN1 690 aa22.05■■□□□ 1.12
SPPL3-208ENST00000543854 TDHQ8IZJ6 230 aa22.05■■□□□ 1.12
SPPL3-208ENST00000543854 CCDC82Q8N4S0 544 aa22.05■■□□□ 1.12
SPPL3-208ENST00000543854 CUL5Q93034 780 aa22.05■■□□□ 1.12
SPPL3-208ENST00000543854 POLR3EQ9NVU0 708 aa22.05■■□□□ 1.12
SPPL3-208ENST00000543854 NAP1L2Q9ULW6 460 aaPredicted RBP22.05■■□□□ 1.12
SPPL3-208ENST00000543854 TRIM43BA6NCK2 446 aa22.04■■□□□ 1.12
SPPL3-208ENST00000543854 GOLGA8AA7E2F4 631 aa22.04■■□□□ 1.12
SPPL3-208ENST00000543854 GOLGA8BA8MQT2 603 aa22.04■■□□□ 1.12
SPPL3-208ENST00000543854 MYCLP12524 364 aaPredicted RBP22.04■■□□□ 1.12
SPPL3-208ENST00000543854 CPA1P15085 419 aa22.04■■□□□ 1.12
SPPL3-208ENST00000543854 PSMA5P28066 241 aa22.04■■□□□ 1.12
SPPL3-208ENST00000543854 CCND2P30279 289 aa22.04■■□□□ 1.12
SPPL3-208ENST00000543854 CDK7P50613 346 aa22.04■■□□□ 1.12
SPPL3-208ENST00000543854 RCAN1P53805 252 aa22.04■■□□□ 1.12
SPPL3-208ENST00000543854 PGM5Q15124 567 aa22.04■■□□□ 1.12
SPPL3-208ENST00000543854 CCDC62Q6P9F0 684 aa22.04■■□□□ 1.12
SPPL3-208ENST00000543854 COPS5Q92905 334 aa22.04■■□□□ 1.12
SPPL3-208ENST00000543854 TRIM43Q96BQ3 446 aaPredicted RBP22.04■■□□□ 1.12
SPPL3-208ENST00000543854 TMEM39AQ9NV64 488 aa22.04■■□□□ 1.12
SPPL3-208ENST00000543854 CNTNAP5Q8WYK1 1306 aa22.04■■□□□ 1.12
SPPL3-208ENST00000543854 KIAA0355O15063 1070 aa22.03■■□□□ 1.12
SPPL3-208ENST00000543854 TLR3O15455 904 aaKnown RBP22.03■■□□□ 1.12
SPPL3-208ENST00000543854 CASTP20810 708 aaKnown RBP22.03■■□□□ 1.12
SPPL3-208ENST00000543854 FAAP100Q0VG06 881 aa22.03■■□□□ 1.12
SPPL3-208ENST00000543854 ITGA7Q13683 1181 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms