RNA–Protein interactions for RNA: ENST00000543455.1

TMED3-204, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 1,483 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-204ENST00000543455 TBX21Q9UL17 535 aa21.61■■□□□ 1.05
TMED3-204ENST00000543455 PCDHA1Q9Y5I3 950 aa21.61■■□□□ 1.05
TMED3-204ENST00000543455 DDAH1O94760 285 aa21.6■■□□□ 1.05
TMED3-204ENST00000543455 CFBP00751 764 aa21.6■■□□□ 1.05
TMED3-204ENST00000543455 CASC1Q6TDU7 716 aa21.6■■□□□ 1.05
TMED3-204ENST00000543455 FAM126BQ8IXS8 530 aa21.6■■□□□ 1.05
TMED3-204ENST00000543455 RASEFQ8IZ41 740 aa21.6■■□□□ 1.05
TMED3-204ENST00000543455 RMDN3Q96TC7 470 aa21.6■■□□□ 1.05
TMED3-204ENST00000543455 MAP3K14Q99558 947 aa21.6■■□□□ 1.05
TMED3-204ENST00000543455 SCN10AQ9Y5Y9 1956 aa21.6■■□□□ 1.05
TMED3-204ENST00000543455 EPHB4P54760 987 aa21.59■■□□□ 1.05
TMED3-204ENST00000543455 C9orf50Q5SZB4 431 aa21.59■■□□□ 1.05
TMED3-204ENST00000543455 CCDC62Q6P9F0 684 aa21.59■■□□□ 1.05
TMED3-204ENST00000543455 NSUN6Q8TEA1 469 aaKnown RBP21.59■■□□□ 1.05
TMED3-204ENST00000543455 VTI1AQ96AJ9 217 aa21.59■■□□□ 1.05
TMED3-204ENST00000543455 TMEM87BQ96K49 555 aa21.59■■□□□ 1.05
TMED3-204ENST00000543455 PXMP2Q9NR77 195 aa21.59■■□□□ 1.05
TMED3-204ENST00000543455 TMEM39AQ9NV64 488 aa21.59■■□□□ 1.05
TMED3-204ENST00000543455 PNMA6FA0A0J9YX94 578 aa21.58■■□□□ 1.05
TMED3-204ENST00000543455 DCDC2CA8MYV0 355 aa21.58■■□□□ 1.05
TMED3-204ENST00000543455 PLEKHA8P1O95397 391 aa21.58■■□□□ 1.05
TMED3-204ENST00000543455 CD4P01730 458 aa21.58■■□□□ 1.05
TMED3-204ENST00000543455 EIF2AK2P19525 551 aaKnown RBP21.58■■□□□ 1.05
TMED3-204ENST00000543455 LIFRP42702 1097 aa21.58■■□□□ 1.05
TMED3-204ENST00000543455 PSMC6P62333 389 aa21.58■■□□□ 1.05
TMED3-204ENST00000543455 ADCK5Q3MIX3 580 aa21.58■■□□□ 1.05
TMED3-204ENST00000543455 SCFD2Q8WU76 684 aa21.58■■□□□ 1.05
TMED3-204ENST00000543455 SPZ1Q9BXG8 430 aa21.58■■□□□ 1.05
TMED3-204ENST00000543455 MROH7Q68CQ1 1323 aa21.58■■□□□ 1.04
TMED3-204ENST00000543455 CABYRO75952 493 aa21.58■■□□□ 1.04
TMED3-204ENST00000543455 RXRAP19793 462 aa21.58■■□□□ 1.04
TMED3-204ENST00000543455 HOXA13P31271 388 aaPredicted RBP21.58■■□□□ 1.04
TMED3-204ENST00000543455 PPP2R5BQ15173 497 aa21.58■■□□□ 1.04
TMED3-204ENST00000543455 SHHQ15465 462 aa21.58■■□□□ 1.04
TMED3-204ENST00000543455 OR6J1Q8NGC5 347 aa21.58■■□□□ 1.04
TMED3-204ENST00000543455 IWS1Q96ST2 819 aa21.58■■□□□ 1.04
TMED3-204ENST00000543455 MPHOSPH6Q99547 160 aaKnown RBP21.58■■□□□ 1.04
TMED3-204ENST00000543455 NKRFO15226 690 aaKnown RBP eCLIP21.57■■□□□ 1.04
TMED3-204ENST00000543455 TXNP10599 105 aaKnown RBP21.57■■□□□ 1.04
TMED3-204ENST00000543455 PURAQ00577 322 aaKnown RBP21.57■■□□□ 1.04
TMED3-204ENST00000543455 ITGA7Q13683 1181 aa21.57■■□□□ 1.04
TMED3-204ENST00000543455 TSGA10IPQ3SY00 556 aa21.57■■□□□ 1.04
TMED3-204ENST00000543455 RAB11FIP4Q86YS3 637 aa21.57■■□□□ 1.04
TMED3-204ENST00000543455 SRBD1Q8N5C6 995 aaKnown RBP21.57■■□□□ 1.04
TMED3-204ENST00000543455 IL31RAQ8NI17 732 aa21.57■■□□□ 1.04
TMED3-204ENST00000543455 PIBF1Q8WXW3 757 aa21.57■■□□□ 1.04
TMED3-204ENST00000543455 B4DLN1 442 aa21.56■■□□□ 1.04
TMED3-204ENST00000543455 ZEB2O60315 1214 aa21.56■■□□□ 1.04
TMED3-204ENST00000543455 RGS20O76081 388 aa21.56■■□□□ 1.04
TMED3-204ENST00000543455 NR3C2P08235 984 aa21.56■■□□□ 1.04
TMED3-204ENST00000543455 RAG1P15918 1043 aa21.56■■□□□ 1.04
TMED3-204ENST00000543455 MRPL12P52815 198 aaKnown RBP21.56■■□□□ 1.04
TMED3-204ENST00000543455 EXOSC10Q01780 885 aaKnown RBP21.56■■□□□ 1.04
TMED3-204ENST00000543455 STXBP2Q15833 593 aa21.56■■□□□ 1.04
TMED3-204ENST00000543455 ARHGEF16Q5VV41 709 aa21.56■■□□□ 1.04
TMED3-204ENST00000543455 CMTR1Q8N1G2 835 aaKnown RBP21.56■■□□□ 1.04
TMED3-204ENST00000543455 CTCFLQ8NI51 663 aaPredicted RBP21.56■■□□□ 1.04
TMED3-204ENST00000543455 TCEANC2Q96MN5 208 aa21.56■■□□□ 1.04
TMED3-204ENST00000543455 PDCD2LQ9BRP1 358 aa21.56■■□□□ 1.04
TMED3-204ENST00000543455 MYH7BA7E2Y1 1941 aa21.55■■□□□ 1.04
TMED3-204ENST00000543455 A6NJR5 290 aa21.55■■□□□ 1.04
TMED3-204ENST00000543455 TIMP1P01033 207 aa21.55■■□□□ 1.04
TMED3-204ENST00000543455 TTLL4Q14679 1199 aa21.55■■□□□ 1.04
TMED3-204ENST00000543455 LY6KQ17RY6 165 aa21.55■■□□□ 1.04
TMED3-204ENST00000543455 NFXL1Q6ZNB6 911 aa21.55■■□□□ 1.04
TMED3-204ENST00000543455 SEPT14Q6ZU15 432 aa21.55■■□□□ 1.04
TMED3-204ENST00000543455 SGMS1Q86VZ5 419 aa21.55■■□□□ 1.04
TMED3-204ENST00000543455 TMTC2Q8N394 836 aa21.55■■□□□ 1.04
TMED3-204ENST00000543455 MAP3K20Q9NYL2 800 aaKnown RBP21.55■■□□□ 1.04
TMED3-204ENST00000543455 CCDC69A6NI79 296 aa21.54■■□□□ 1.04
TMED3-204ENST00000543455 SMARCA1P28370 1054 aa21.54■■□□□ 1.04
TMED3-204ENST00000543455 CPT1AP50416 773 aa21.54■■□□□ 1.04
TMED3-204ENST00000543455 ARHGAP1Q07960 439 aa21.54■■□□□ 1.04
TMED3-204ENST00000543455 RNF20Q5VTR2 975 aa21.54■■□□□ 1.04
TMED3-204ENST00000543455 SAMD3Q8N6K7 520 aa21.54■■□□□ 1.04
TMED3-204ENST00000543455 KCNB2Q92953 911 aa21.54■■□□□ 1.04
TMED3-204ENST00000543455 NEK1Q96PY6 1258 aa21.54■■□□□ 1.04
TMED3-204ENST00000543455 MYL3P08590 195 aa21.53■■□□□ 1.04
TMED3-204ENST00000543455 KIF5BP33176 963 aa21.53■■□□□ 1.04
TMED3-204ENST00000543455 PGM5Q15124 567 aa21.53■■□□□ 1.04
TMED3-204ENST00000543455 TRPV6Q9H1D0 765 aa21.53■■□□□ 1.04
TMED3-204ENST00000543455 POLR3EQ9NVU0 708 aa21.53■■□□□ 1.04
TMED3-204ENST00000543455 GCOM1H8Y6P7 765 aaPredicted RBP21.52■■□□□ 1.04
TMED3-204ENST00000543455 B4GALT4O60513 344 aa21.52■■□□□ 1.04
TMED3-204ENST00000543455 EIF3JO75822 258 aaKnown RBP21.52■■□□□ 1.04
TMED3-204ENST00000543455 POLR2MP0CAP2 368 aa21.52■■□□□ 1.04
TMED3-204ENST00000543455 GPR153Q6NV75 609 aa21.52■■□□□ 1.04
TMED3-204ENST00000543455 PPP1R13LQ8WUF5 828 aa21.52■■□□□ 1.04
TMED3-204ENST00000543455 DDX41Q9UJV9 622 aaKnown RBP21.52■■□□□ 1.04
TMED3-204ENST00000543455 BRPF3Q9ULD4 1205 aa21.52■■□□□ 1.04
TMED3-204ENST00000543455 FRMPD4Q14CM0 1322 aa21.52■■□□□ 1.04
TMED3-204ENST00000543455 UMODL1Q5DID0 1318 aa21.52■■□□□ 1.04
TMED3-204ENST00000543455 FPGSQ05932 587 aa21.52■■□□□ 1.03
TMED3-204ENST00000543455 TRAF1Q13077 416 aa21.52■■□□□ 1.03
TMED3-204ENST00000543455 MFSD5Q6N075 450 aa21.52■■□□□ 1.03
TMED3-204ENST00000543455 APOA5Q6Q788 366 aa21.52■■□□□ 1.03
TMED3-204ENST00000543455 TMTC3Q6ZXV5 915 aa21.52■■□□□ 1.03
TMED3-204ENST00000543455 Q7L0L9 218 aa21.52■■□□□ 1.03
TMED3-204ENST00000543455 VSIG10LQ86VR7 867 aa21.52■■□□□ 1.03
TMED3-204ENST00000543455 AFG1LQ8WV93 481 aa21.52■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms