RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 TARSL2A2RTX5 802 aaKnown RBP18.5■□□□□ 0.55
KDM2B-216ENST00000543025 SRGAP2O75044 1071 aa18.5■□□□□ 0.55
KDM2B-216ENST00000543025 ACTN2P35609 894 aa18.5■□□□□ 0.55
KDM2B-216ENST00000543025 CDK17Q00537 523 aa18.5■□□□□ 0.55
KDM2B-216ENST00000543025 COBLL1Q53SF7 1204 aa18.5■□□□□ 0.55
KDM2B-216ENST00000543025 MIIPQ5JXC2 388 aa18.5■□□□□ 0.55
KDM2B-216ENST00000543025 CNNM4Q6P4Q7 775 aa18.5■□□□□ 0.55
KDM2B-216ENST00000543025 NEK8Q86SG6 692 aa18.5■□□□□ 0.55
KDM2B-216ENST00000543025 TGFBRAP1Q8WUH2 860 aa18.5■□□□□ 0.55
KDM2B-216ENST00000543025 IQCDQ96DY2 449 aa18.5■□□□□ 0.55
KDM2B-216ENST00000543025 ERGIC2Q96RQ1 377 aa18.5■□□□□ 0.55
KDM2B-216ENST00000543025 C6orf50Q9HD87 102 aa18.5■□□□□ 0.55
KDM2B-216ENST00000543025 FCER1AP12319 257 aa18.49■□□□□ 0.55
KDM2B-216ENST00000543025 RASA1P20936 1047 aa18.49■□□□□ 0.55
KDM2B-216ENST00000543025 PPP4CP60510 307 aa18.49■□□□□ 0.55
KDM2B-216ENST00000543025 IRX5P78411 483 aaPredicted RBP18.49■□□□□ 0.55
KDM2B-216ENST00000543025 FKBP15Q5T1M5 1219 aa18.49■□□□□ 0.55
KDM2B-216ENST00000543025 LACRTQ9GZZ8 138 aa18.49■□□□□ 0.55
KDM2B-216ENST00000543025 NAV1Q8NEY1 1877 aa18.49■□□□□ 0.55
KDM2B-216ENST00000543025 RCCD1A6NED2 376 aa18.49■□□□□ 0.55
KDM2B-216ENST00000543025 SMCO2A6NFE2 343 aa18.49■□□□□ 0.55
KDM2B-216ENST00000543025 PDE6BP35913 854 aa18.49■□□□□ 0.55
KDM2B-216ENST00000543025 DIXDC1Q155Q3 683 aa18.49■□□□□ 0.55
KDM2B-216ENST00000543025 LEKR1Q6ZMV7 388 aa18.49■□□□□ 0.55
KDM2B-216ENST00000543025 PURBQ96QR8 312 aaKnown RBP18.49■□□□□ 0.55
KDM2B-216ENST00000543025 TSGA10Q9BZW7 698 aa18.49■□□□□ 0.55
KDM2B-216ENST00000543025 RNF216Q9NWF9 866 aaPredicted RBP18.49■□□□□ 0.55
KDM2B-216ENST00000543025 TECP42680 631 aa18.48■□□□□ 0.55
KDM2B-216ENST00000543025 KIF5AQ12840 1032 aa18.48■□□□□ 0.55
KDM2B-216ENST00000543025 CALML4Q96GE6 196 aa18.48■□□□□ 0.55
KDM2B-216ENST00000543025 CAPZA3Q96KX2 299 aa18.48■□□□□ 0.55
KDM2B-216ENST00000543025 CAPN2P17655 700 aa18.48■□□□□ 0.55
KDM2B-216ENST00000543025 VAV2P52735 878 aa18.48■□□□□ 0.55
KDM2B-216ENST00000543025 ORC2Q13416 577 aaPredicted RBP18.48■□□□□ 0.55
KDM2B-216ENST00000543025 ANKIB1Q9P2G1 1089 aa18.48■□□□□ 0.55
KDM2B-216ENST00000543025 POLD1P28340 1107 aa18.47■□□□□ 0.55
KDM2B-216ENST00000543025 GRAPQ13588 217 aa18.47■□□□□ 0.55
KDM2B-216ENST00000543025 SOGA3Q5TF21 947 aa18.47■□□□□ 0.55
KDM2B-216ENST00000543025 GRAPLQ8TC17 118 aaPredicted RBP18.47■□□□□ 0.55
KDM2B-216ENST00000543025 SECISBP2LQ93073 1101 aaKnown RBP18.47■□□□□ 0.55
KDM2B-216ENST00000543025 RRP36Q96EU6 259 aaKnown RBP18.47■□□□□ 0.55
KDM2B-216ENST00000543025 RBM17Q96I25 401 aaKnown RBP18.47■□□□□ 0.55
KDM2B-216ENST00000543025 CPVLQ9H3G5 476 aa18.47■□□□□ 0.55
KDM2B-216ENST00000543025 SEC63Q9UGP8 760 aaKnown RBP18.47■□□□□ 0.55
KDM2B-216ENST00000543025 LDHCP07864 332 aa18.47■□□□□ 0.55
KDM2B-216ENST00000543025 IDEP14735 1019 aa18.47■□□□□ 0.55
KDM2B-216ENST00000543025 HOXA10P31260 410 aaPredicted RBP18.47■□□□□ 0.55
KDM2B-216ENST00000543025 MAPKAPK5Q8IW41 473 aa18.47■□□□□ 0.55
KDM2B-216ENST00000543025 KIAA0895Q8NCT3 520 aa18.47■□□□□ 0.55
KDM2B-216ENST00000543025 CAGE1Q8TC20 777 aa18.47■□□□□ 0.55
KDM2B-216ENST00000543025 ZBTB9Q96C00 473 aa18.47■□□□□ 0.55
KDM2B-216ENST00000543025 CCDC42Q96M95 316 aa18.47■□□□□ 0.55
KDM2B-216ENST00000543025 SGIP1Q9BQI5 828 aa18.47■□□□□ 0.55
KDM2B-216ENST00000543025 SPA17Q15506 151 aa18.46■□□□□ 0.55
KDM2B-216ENST00000543025 IQCEQ6IPM2 695 aa18.46■□□□□ 0.55
KDM2B-216ENST00000543025 EYA3Q99504 573 aa18.46■□□□□ 0.55
KDM2B-216ENST00000543025 MMTAG2Q9BU76 263 aaKnown RBP18.46■□□□□ 0.55
KDM2B-216ENST00000543025 JADE2Q9NQC1 790 aa18.46■□□□□ 0.55
KDM2B-216ENST00000543025 SAP30BPQ9UHR5 308 aaKnown RBP18.46■□□□□ 0.55
KDM2B-216ENST00000543025 LEMD3Q9Y2U8 911 aa18.46■□□□□ 0.55
KDM2B-216ENST00000543025 MACROD2A1Z1Q3 448 aa18.46■□□□□ 0.55
KDM2B-216ENST00000543025 AARSP49588 968 aaKnown RBP eCLIP18.46■□□□□ 0.55
KDM2B-216ENST00000543025 CYP27A1Q02318 531 aa18.46■□□□□ 0.55
KDM2B-216ENST00000543025 CENPPQ6IPU0 288 aa18.46■□□□□ 0.55
KDM2B-216ENST00000543025 CERS3Q8IU89 383 aa18.46■□□□□ 0.55
KDM2B-216ENST00000543025 TBCKQ8TEA7 893 aa18.46■□□□□ 0.55
KDM2B-216ENST00000543025 PLAGL2Q9UPG8 496 aa18.46■□□□□ 0.55
KDM2B-216ENST00000543025 DUSP10Q9Y6W6 482 aa18.46■□□□□ 0.55
KDM2B-216ENST00000543025 SNED1Q8TER0 1413 aa18.45■□□□□ 0.54
KDM2B-216ENST00000543025 PHACTR2O75167 634 aa18.45■□□□□ 0.54
KDM2B-216ENST00000543025 SMARCA1P28370 1054 aa18.45■□□□□ 0.54
KDM2B-216ENST00000543025 HNRNPH3P31942 346 aaKnown RBP18.45■□□□□ 0.54
KDM2B-216ENST00000543025 TNNT3P45378 269 aaPredicted RBP18.45■□□□□ 0.54
KDM2B-216ENST00000543025 SV2BQ7L1I2 683 aa18.45■□□□□ 0.54
KDM2B-216ENST00000543025 TRIM58Q8NG06 486 aa18.45■□□□□ 0.54
KDM2B-216ENST00000543025 SEMA6BQ9H3T3 888 aa18.45■□□□□ 0.54
KDM2B-216ENST00000543025 USO1O60763 962 aaKnown RBP18.45■□□□□ 0.54
KDM2B-216ENST00000543025 IVLP07476 585 aa18.45■□□□□ 0.54
KDM2B-216ENST00000543025 CDK8P49336 464 aa18.45■□□□□ 0.54
KDM2B-216ENST00000543025 GRIK5Q16478 980 aa18.45■□□□□ 0.54
KDM2B-216ENST00000543025 USP17L2Q6R6M4 530 aa18.45■□□□□ 0.54
KDM2B-216ENST00000543025 C16orf86Q6ZW13 317 aa18.45■□□□□ 0.54
KDM2B-216ENST00000543025 POTEDQ86YR6 584 aa18.45■□□□□ 0.54
KDM2B-216ENST00000543025 C2CD5Q86YS7 1000 aa18.45■□□□□ 0.54
KDM2B-216ENST00000543025 CRAMP1Q96RY5 1269 aa18.45■□□□□ 0.54
KDM2B-216ENST00000543025 TSPYL1Q9H0U9 437 aa18.45■□□□□ 0.54
KDM2B-216ENST00000543025 SLC39A2Q9NP94 309 aa18.45■□□□□ 0.54
KDM2B-216ENST00000543025 LRRC37AA6NMS7 1700 aa18.44■□□□□ 0.54
KDM2B-216ENST00000543025 NPR1P16066 1061 aa18.44■□□□□ 0.54
KDM2B-216ENST00000543025 PTGER2P43116 358 aa18.44■□□□□ 0.54
KDM2B-216ENST00000543025 VWA3BQ502W6 1294 aa18.44■□□□□ 0.54
KDM2B-216ENST00000543025 ZNF804AQ7Z570 1209 aa18.44■□□□□ 0.54
KDM2B-216ENST00000543025 SLC51AQ86UW1 340 aa18.44■□□□□ 0.54
KDM2B-216ENST00000543025 REXO1Q8N1G1 1221 aaKnown RBP18.44■□□□□ 0.54
KDM2B-216ENST00000543025 NEDD1Q8NHV4 660 aa18.44■□□□□ 0.54
KDM2B-216ENST00000543025 RTFDC1Q9BY42 306 aaPredicted RBP18.44■□□□□ 0.54
KDM2B-216ENST00000543025 STK17AQ9UEE5 414 aa18.44■□□□□ 0.54
KDM2B-216ENST00000543025 LRWD1Q9UFC0 647 aa18.44■□□□□ 0.54
KDM2B-216ENST00000543025 JRKLQ9Y4A0 524 aa18.44■□□□□ 0.54
KDM2B-216ENST00000543025 ZNF263O14978 683 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms