RNA–Protein interactions for RNA: ENST00000542922.5

SLC3A2-220, Transcript of solute carrier family 3 member 2, humanhuman

TSL 2

Gene SLC3A2, Length 2,174 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-220ENST00000542922 SLF1Q9BQI6 1058 aa15.32■□□□□ 0.04
SLC3A2-220ENST00000542922 EHD4Q9H223 541 aa15.32■□□□□ 0.04
SLC3A2-220ENST00000542922 DDX25Q9UHL0 483 aaKnown RBP15.32■□□□□ 0.04
SLC3A2-220ENST00000542922 TPM1P09493 284 aa15.31■□□□□ 0.04
SLC3A2-220ENST00000542922 ORC2Q13416 577 aaPredicted RBP15.31■□□□□ 0.04
SLC3A2-220ENST00000542922 GPATCH4Q5T3I0 446 aaKnown RBP15.31■□□□□ 0.04
SLC3A2-220ENST00000542922 PPP1R18Q6NYC8 613 aa15.31■□□□□ 0.04
SLC3A2-220ENST00000542922 P2RX7Q99572 595 aaKnown RBP15.31■□□□□ 0.04
SLC3A2-220ENST00000542922 TUBGCP2Q9BSJ2 902 aa15.31■□□□□ 0.04
SLC3A2-220ENST00000542922 TMX4Q9H1E5 349 aaPredicted RBP15.31■□□□□ 0.04
SLC3A2-220ENST00000542922 PSTPIP2Q9H939 334 aa15.31■□□□□ 0.04
SLC3A2-220ENST00000542922 DDX41Q9UJV9 622 aaKnown RBP15.31■□□□□ 0.04
SLC3A2-220ENST00000542922 TFR2Q9UP52 801 aa15.31■□□□□ 0.04
SLC3A2-220ENST00000542922 REXO2Q9Y3B8 237 aaKnown RBP15.31■□□□□ 0.04
SLC3A2-220ENST00000542922 ARHGAP25P42331 645 aa15.31■□□□□ 0.04
SLC3A2-220ENST00000542922 CERKLQ49MI3 558 aaPredicted RBP15.31■□□□□ 0.04
SLC3A2-220ENST00000542922 SV2BQ7L1I2 683 aa15.31■□□□□ 0.04
SLC3A2-220ENST00000542922 LARP4BQ92615 738 aaKnown RBP15.31■□□□□ 0.04
SLC3A2-220ENST00000542922 MAGEC2Q9UBF1 373 aaPredicted RBP15.31■□□□□ 0.04
SLC3A2-220ENST00000542922 TRIM10Q9UDY6 481 aa15.31■□□□□ 0.04
SLC3A2-220ENST00000542922 SMCHD1A6NHR9 2005 aa15.3■□□□□ 0.04
SLC3A2-220ENST00000542922 PPP2R3AQ06190 1150 aa15.3■□□□□ 0.04
SLC3A2-220ENST00000542922 TMEM266Q2M3C6 531 aa15.3■□□□□ 0.04
SLC3A2-220ENST00000542922 MIIPQ5JXC2 388 aa15.3■□□□□ 0.04
SLC3A2-220ENST00000542922 STRIP1Q5VSL9 837 aa15.3■□□□□ 0.04
SLC3A2-220ENST00000542922 TMTC1Q8IUR5 882 aa15.3■□□□□ 0.04
SLC3A2-220ENST00000542922 RAD54LQ92698 747 aa15.3■□□□□ 0.04
SLC3A2-220ENST00000542922 CDK5RAP3Q96JB5 506 aa15.3■□□□□ 0.04
SLC3A2-220ENST00000542922 ATF5Q9Y2D1 282 aaPredicted RBP15.3■□□□□ 0.04
SLC3A2-220ENST00000542922 SLC1A4P43007 532 aa15.29■□□□□ 0.04
SLC3A2-220ENST00000542922 CLCN6P51797 869 aa15.29■□□□□ 0.04
SLC3A2-220ENST00000542922 TRIM14Q14142 442 aa15.29■□□□□ 0.04
SLC3A2-220ENST00000542922 RRP1BQ14684 758 aaKnown RBP15.29■□□□□ 0.04
SLC3A2-220ENST00000542922 LRRC41Q15345 812 aa15.29■□□□□ 0.04
SLC3A2-220ENST00000542922 CDC37Q16543 378 aaPredicted RBP15.29■□□□□ 0.04
SLC3A2-220ENST00000542922 TMEM119Q4V9L6 283 aa15.29■□□□□ 0.04
SLC3A2-220ENST00000542922 ZNF569Q5MCW4 686 aa15.29■□□□□ 0.04
SLC3A2-220ENST00000542922 SLFN13Q68D06 897 aa15.29■□□□□ 0.04
SLC3A2-220ENST00000542922 PPP4R3AQ6IN85 833 aa15.29■□□□□ 0.04
SLC3A2-220ENST00000542922 WDR59Q6PJI9 974 aa15.29■□□□□ 0.04
SLC3A2-220ENST00000542922 CYP26C1Q6V0L0 522 aa15.29■□□□□ 0.04
SLC3A2-220ENST00000542922 UBXN4Q92575 508 aa15.29■□□□□ 0.04
SLC3A2-220ENST00000542922 TDRD3Q9H7E2 651 aaKnown RBP15.29■□□□□ 0.04
SLC3A2-220ENST00000542922 AGPAT5Q9NUQ2 364 aa15.29■□□□□ 0.04
SLC3A2-220ENST00000542922 STK17AQ9UEE5 414 aa15.29■□□□□ 0.04
SLC3A2-220ENST00000542922 A0A1W2PQC6 194 aa15.29■□□□□ 0.04
SLC3A2-220ENST00000542922 IDEP14735 1019 aa15.29■□□□□ 0.04
SLC3A2-220ENST00000542922 ERCC3P19447 782 aa15.29■□□□□ 0.04
SLC3A2-220ENST00000542922 AMPD3Q01432 767 aa15.29■□□□□ 0.04
SLC3A2-220ENST00000542922 SLC35F6Q8N357 371 aa15.29■□□□□ 0.04
SLC3A2-220ENST00000542922 CCDC47Q96A33 483 aaKnown RBP15.29■□□□□ 0.04
SLC3A2-220ENST00000542922 CCDC17Q96LX7 622 aa15.29■□□□□ 0.04
SLC3A2-220ENST00000542922 FEZ1Q99689 392 aa15.29■□□□□ 0.04
SLC3A2-220ENST00000542922 ZSWIM4Q9H7M6 989 aa15.29■□□□□ 0.04
SLC3A2-220ENST00000542922 PI4KBQ9UBF8 816 aa15.29■□□□□ 0.04
SLC3A2-220ENST00000542922 PCDHA1Q9Y5I3 950 aa15.29■□□□□ 0.04
SLC3A2-220ENST00000542922 H0YIN7 160 aa15.28■□□□□ 0.04
SLC3A2-220ENST00000542922 MTIF2P46199 727 aaKnown RBP15.28■□□□□ 0.04
SLC3A2-220ENST00000542922 MRPL12P52815 198 aaKnown RBP15.28■□□□□ 0.04
SLC3A2-220ENST00000542922 KRT79Q5XKE5 535 aa15.28■□□□□ 0.04
SLC3A2-220ENST00000542922 CNNM4Q6P4Q7 775 aa15.28■□□□□ 0.04
SLC3A2-220ENST00000542922 UNC13DQ70J99 1090 aa15.28■□□□□ 0.04
SLC3A2-220ENST00000542922 DDX12PQ92771 950 aa15.28■□□□□ 0.04
SLC3A2-220ENST00000542922 IDI2Q9BXS1 227 aa15.28■□□□□ 0.04
SLC3A2-220ENST00000542922 TTYH3Q9C0H2 523 aa15.28■□□□□ 0.04
SLC3A2-220ENST00000542922 BICDL2A1A5D9 508 aa15.28■□□□□ 0.04
SLC3A2-220ENST00000542922 KIF5CO60282 957 aa15.28■□□□□ 0.04
SLC3A2-220ENST00000542922 STAT3P40763 770 aa15.28■□□□□ 0.04
SLC3A2-220ENST00000542922 ICA1Q05084 483 aa15.28■□□□□ 0.04
SLC3A2-220ENST00000542922 TEX35Q5T0J7 233 aa15.28■□□□□ 0.04
SLC3A2-220ENST00000542922 DNAJC7Q99615 494 aa15.28■□□□□ 0.04
SLC3A2-220ENST00000542922 FGFBP2Q9BYJ0 223 aa15.28■□□□□ 0.04
SLC3A2-220ENST00000542922 OGFRQ9NZT2 677 aa15.28■□□□□ 0.04
SLC3A2-220ENST00000542922 TNS1Q9HBL0 1735 aaKnown RBP15.27■□□□□ 0.04
SLC3A2-220ENST00000542922 YDJCA8MPS7 323 aa15.27■□□□□ 0.04
SLC3A2-220ENST00000542922 EFCAB8A8MWE9 144 aa15.27■□□□□ 0.04
SLC3A2-220ENST00000542922 DNM2P50570 870 aa15.27■□□□□ 0.04
SLC3A2-220ENST00000542922 TBC1D8BQ0IIM8 1120 aa15.27■□□□□ 0.04
SLC3A2-220ENST00000542922 SEMA3FQ13275 785 aa15.27■□□□□ 0.04
SLC3A2-220ENST00000542922 PDIA5Q14554 519 aa15.27■□□□□ 0.04
SLC3A2-220ENST00000542922 CENPPQ6IPU0 288 aa15.27■□□□□ 0.04
SLC3A2-220ENST00000542922 TATDN1Q6P1N9 297 aa15.27■□□□□ 0.04
SLC3A2-220ENST00000542922 GPIHBP1Q8IV16 184 aa15.27■□□□□ 0.04
SLC3A2-220ENST00000542922 OR8K1Q8NGG5 319 aa15.27■□□□□ 0.04
SLC3A2-220ENST00000542922 NOC3LQ8WTT2 800 aaKnown RBP15.27■□□□□ 0.04
SLC3A2-220ENST00000542922 MKL1Q969V6 931 aa15.27■□□□□ 0.04
SLC3A2-220ENST00000542922 DHX36Q9H2U1 1008 aaKnown RBP15.27■□□□□ 0.04
SLC3A2-220ENST00000542922 NYAP2Q9P242 653 aa15.27■□□□□ 0.04
SLC3A2-220ENST00000542922 CAPN11Q9UMQ6 739 aa15.27■□□□□ 0.04
SLC3A2-220ENST00000542922 LUC7L2Q9Y383 392 aaKnown RBP15.27■□□□□ 0.04
SLC3A2-220ENST00000542922 NDUFA10O95299 355 aa15.26■□□□□ 0.03
SLC3A2-220ENST00000542922 HERVK_113P62684 666 aa15.26■□□□□ 0.03
SLC3A2-220ENST00000542922 CACNB1Q02641 598 aaPredicted RBP15.26■□□□□ 0.03
SLC3A2-220ENST00000542922 USH1GQ495M9 461 aa15.26■□□□□ 0.03
SLC3A2-220ENST00000542922 STYK1Q6J9G0 422 aa15.26■□□□□ 0.03
SLC3A2-220ENST00000542922 FLAD1Q8NFF5 587 aa15.26■□□□□ 0.03
SLC3A2-220ENST00000542922 PRMT6Q96LA8 375 aaPredicted RBP15.26■□□□□ 0.03
SLC3A2-220ENST00000542922 NOC4LQ9BVI4 516 aaKnown RBP15.26■□□□□ 0.03
SLC3A2-220ENST00000542922 ANO3Q9BYT9 981 aa15.26■□□□□ 0.03
SLC3A2-220ENST00000542922 KANSL2Q9H9L4 492 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms