RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 RABEP2Q9H5N1 569 aa14.35□□□□□ -0.11
DDX11-223ENST00000542838 ZNF652Q9Y2D9 606 aa14.35□□□□□ -0.11
DDX11-223ENST00000542838 SIK3Q9Y2K2 1263 aa14.35□□□□□ -0.11
DDX11-223ENST00000542838 A0A087WUV0 522 aaPredicted RBP14.35□□□□□ -0.11
DDX11-223ENST00000542838 LOC102724428A0A0B4J2F2 783 aa14.35□□□□□ -0.11
DDX11-223ENST00000542838 HIBADHP31937 336 aaKnown RBP14.35□□□□□ -0.11
DDX11-223ENST00000542838 MAGEA1P43355 309 aa14.35□□□□□ -0.11
DDX11-223ENST00000542838 SIK1P57059 783 aa14.35□□□□□ -0.11
DDX11-223ENST00000542838 ITPK1Q13572 414 aa14.35□□□□□ -0.11
DDX11-223ENST00000542838 RRAGAQ7L523 313 aa14.35□□□□□ -0.11
DDX11-223ENST00000542838 FAM107BQ9H098 131 aa14.35□□□□□ -0.11
DDX11-223ENST00000542838 EHD4Q9H223 541 aa14.35□□□□□ -0.11
DDX11-223ENST00000542838 MYH14Q7Z406 1995 aaKnown RBP14.35□□□□□ -0.11
DDX11-223ENST00000542838 NCK2O43639 380 aa14.35□□□□□ -0.11
DDX11-223ENST00000542838 TSPY3P0CV98 308 aa14.35□□□□□ -0.11
DDX11-223ENST00000542838 TSPY8P0CW00 308 aa14.35□□□□□ -0.11
DDX11-223ENST00000542838 HSPA2P54652 639 aa14.35□□□□□ -0.11
DDX11-223ENST00000542838 NAPAP54920 295 aa14.35□□□□□ -0.11
DDX11-223ENST00000542838 GNGT1P63211 74 aa14.35□□□□□ -0.11
DDX11-223ENST00000542838 NONOQ15233 471 aaKnown RBP eCLIP14.35□□□□□ -0.11
DDX11-223ENST00000542838 C12orf60Q5U649 245 aa14.35□□□□□ -0.11
DDX11-223ENST00000542838 HAUS3Q68CZ6 603 aa14.35□□□□□ -0.11
DDX11-223ENST00000542838 CENPPQ6IPU0 288 aa14.35□□□□□ -0.11
DDX11-223ENST00000542838 GBP6Q6ZN66 633 aa14.35□□□□□ -0.11
DDX11-223ENST00000542838 TADA2BQ86TJ2 420 aa14.35□□□□□ -0.11
DDX11-223ENST00000542838 MICALL1Q8N3F8 863 aa14.35□□□□□ -0.11
DDX11-223ENST00000542838 BCAS4Q8TDM0 211 aa14.35□□□□□ -0.11
DDX11-223ENST00000542838 ANKS1AQ92625 1134 aa14.35□□□□□ -0.11
DDX11-223ENST00000542838 CALML4Q96GE6 196 aa14.35□□□□□ -0.11
DDX11-223ENST00000542838 SH3GL2Q99962 352 aa14.35□□□□□ -0.11
DDX11-223ENST00000542838 STIM2Q9P246 746 aa14.35□□□□□ -0.11
DDX11-223ENST00000542838 LRRC53A6NM62 1247 aa14.34□□□□□ -0.11
DDX11-223ENST00000542838 EBAG9O00559 213 aa14.34□□□□□ -0.11
DDX11-223ENST00000542838 GOLGA8HP0CJ92 632 aa14.34□□□□□ -0.11
DDX11-223ENST00000542838 KRT25Q7Z3Z0 450 aa14.34□□□□□ -0.11
DDX11-223ENST00000542838 PLCD3Q8N3E9 789 aa14.34□□□□□ -0.11
DDX11-223ENST00000542838 ANKRD13CQ8N6S4 541 aa14.34□□□□□ -0.11
DDX11-223ENST00000542838 TSEN2Q8NCE0 465 aaKnown RBP14.34□□□□□ -0.11
DDX11-223ENST00000542838 HSF2BPO75031 334 aa14.34□□□□□ -0.11
DDX11-223ENST00000542838 LCA5LO95447 670 aa14.34□□□□□ -0.11
DDX11-223ENST00000542838 MAN2A1Q16706 1144 aa14.34□□□□□ -0.11
DDX11-223ENST00000542838 COBLL1Q53SF7 1204 aa14.34□□□□□ -0.11
DDX11-223ENST00000542838 DZIP1Q86YF9 867 aaKnown RBP14.34□□□□□ -0.11
DDX11-223ENST00000542838 STX8Q9UNK0 236 aa14.34□□□□□ -0.11
DDX11-223ENST00000542838 CCDC88AQ3V6T2 1871 aa14.34□□□□□ -0.11
DDX11-223ENST00000542838 ICE2Q659A1 982 aa14.33□□□□□ -0.11
DDX11-223ENST00000542838 TTC19Q6DKK2 380 aaPredicted RBP14.33□□□□□ -0.11
DDX11-223ENST00000542838 C8orf74Q6P047 294 aa14.33□□□□□ -0.11
DDX11-223ENST00000542838 EMBQ6PCB8 327 aa14.33□□□□□ -0.11
DDX11-223ENST00000542838 SV2BQ7L1I2 683 aa14.33□□□□□ -0.11
DDX11-223ENST00000542838 MMTAG2Q9BU76 263 aaKnown RBP14.33□□□□□ -0.11
DDX11-223ENST00000542838 ZMYND12Q9H0C1 365 aa14.33□□□□□ -0.11
DDX11-223ENST00000542838 CPVLQ9H3G5 476 aa14.33□□□□□ -0.11
DDX11-223ENST00000542838 SHTN1A0MZ66 631 aa14.33□□□□□ -0.12
DDX11-223ENST00000542838 EIF3HO15372 352 aaKnown RBP eCLIP14.33□□□□□ -0.12
DDX11-223ENST00000542838 NAP1L1P55209 391 aaKnown RBP14.33□□□□□ -0.12
DDX11-223ENST00000542838 ATP2B2Q01814 1243 aa14.33□□□□□ -0.12
DDX11-223ENST00000542838 ALS2CLQ60I27 953 aa14.33□□□□□ -0.12
DDX11-223ENST00000542838 TMED8Q6PL24 325 aaPredicted RBP14.33□□□□□ -0.12
DDX11-223ENST00000542838 CCDC84Q86UT8 332 aaPredicted RBP14.33□□□□□ -0.12
DDX11-223ENST00000542838 ZNF444Q8N0Y2 327 aaPredicted RBP14.33□□□□□ -0.12
DDX11-223ENST00000542838 SALL4Q9UJQ4 1053 aa14.33□□□□□ -0.12
DDX11-223ENST00000542838 PALM3A6NDB9 673 aaPredicted RBP14.33□□□□□ -0.12
DDX11-223ENST00000542838 SMCO2A6NFE2 343 aa14.33□□□□□ -0.12
DDX11-223ENST00000542838 BUB1O43683 1085 aa14.33□□□□□ -0.12
DDX11-223ENST00000542838 CPP00450 1065 aa14.33□□□□□ -0.12
DDX11-223ENST00000542838 ERCC3P19447 782 aa14.33□□□□□ -0.12
DDX11-223ENST00000542838 RASSF7Q02833 373 aa14.33□□□□□ -0.12
DDX11-223ENST00000542838 NEK8Q86SG6 692 aa14.33□□□□□ -0.12
DDX11-223ENST00000542838 ARL8AQ96BM9 186 aa14.33□□□□□ -0.12
DDX11-223ENST00000542838 TMEM47Q9BQJ4 181 aa14.33□□□□□ -0.12
DDX11-223ENST00000542838 FAM169AQ9Y6X4 670 aa14.33□□□□□ -0.12
DDX11-223ENST00000542838 GRIN2DO15399 1336 aa14.32□□□□□ -0.12
DDX11-223ENST00000542838 KLRF2D3W0D1 207 aa14.32□□□□□ -0.12
DDX11-223ENST00000542838 FGFR1OPO95684 399 aaKnown RBP14.32□□□□□ -0.12
DDX11-223ENST00000542838 TTMPQ5BVD1 217 aa14.32□□□□□ -0.12
DDX11-223ENST00000542838 BICDL1Q6ZP65 573 aa14.32□□□□□ -0.12
DDX11-223ENST00000542838 DYMQ7RTS9 669 aa14.32□□□□□ -0.12
DDX11-223ENST00000542838 CACNA2D4Q7Z3S7 1137 aa14.32□□□□□ -0.12
DDX11-223ENST00000542838 RBM12Q9NTZ6 932 aaKnown RBP14.32□□□□□ -0.12
DDX11-223ENST00000542838 MYMKA6NI61 221 aa14.32□□□□□ -0.12
DDX11-223ENST00000542838 PJA2O43164 708 aa14.32□□□□□ -0.12
DDX11-223ENST00000542838 TXKP42681 527 aa14.32□□□□□ -0.12
DDX11-223ENST00000542838 GFPT1Q06210 699 aaPredicted RBP14.32□□□□□ -0.12
DDX11-223ENST00000542838 NOX5Q96PH1 765 aa14.32□□□□□ -0.12
DDX11-223ENST00000542838 TLR10Q9BXR5 811 aa14.32□□□□□ -0.12
DDX11-223ENST00000542838 C6orf50Q9HD87 102 aa14.32□□□□□ -0.12
DDX11-223ENST00000542838 EPB41P11171 864 aaKnown RBP14.31□□□□□ -0.12
DDX11-223ENST00000542838 GTF2A1P52655 376 aaPredicted RBP14.31□□□□□ -0.12
DDX11-223ENST00000542838 TDRD12Q587J7 1177 aaKnown RBP14.31□□□□□ -0.12
DDX11-223ENST00000542838 UNC13DQ70J99 1090 aa14.31□□□□□ -0.12
DDX11-223ENST00000542838 POTEDQ86YR6 584 aa14.31□□□□□ -0.12
DDX11-223ENST00000542838 SLC44A5Q8NCS7 719 aa14.31□□□□□ -0.12
DDX11-223ENST00000542838 TBCKQ8TEA7 893 aa14.31□□□□□ -0.12
DDX11-223ENST00000542838 BAP1Q92560 729 aa14.31□□□□□ -0.12
DDX11-223ENST00000542838 CAVIN3Q969G5 261 aa14.31□□□□□ -0.12
DDX11-223ENST00000542838 MTMR8Q96EF0 704 aa14.31□□□□□ -0.12
DDX11-223ENST00000542838 MS4A14Q96JA4 679 aa14.31□□□□□ -0.12
DDX11-223ENST00000542838 TNFRSF8P28908 595 aa14.31□□□□□ -0.12
DDX11-223ENST00000542838 GNA11P29992 359 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms