RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 TTC38Q5R3I4 469 aa31.64■■■□□ 2.66
CCM2-218ENST00000541586 AXDND1Q5T1B0 1012 aaPredicted RBP31.64■■■□□ 2.66
CCM2-218ENST00000541586 CD99L2Q8TCZ2 262 aa31.64■■■□□ 2.66
CCM2-218ENST00000541586 MROH8Q9H579 483 aa31.64■■■□□ 2.66
CCM2-218ENST00000541586 MRPL11Q9Y3B7 192 aaKnown RBP31.64■■■□□ 2.66
CCM2-218ENST00000541586 A0A1W2PQ27 194 aa31.63■■■□□ 2.65
CCM2-218ENST00000541586 A0A1W2PQ64 194 aa31.63■■■□□ 2.65
CCM2-218ENST00000541586 A0A1W2PQD8 194 aa31.63■■■□□ 2.65
CCM2-218ENST00000541586 MAPK4P31152 587 aa31.63■■■□□ 2.65
CCM2-218ENST00000541586 REXO1Q8N1G1 1221 aaKnown RBP31.63■■■□□ 2.65
CCM2-218ENST00000541586 RIC8AQ9NPQ8 531 aa31.63■■■□□ 2.65
CCM2-218ENST00000541586 ABCB11O95342 1321 aa31.63■■■□□ 2.65
CCM2-218ENST00000541586 CTGFP29279 349 aa31.63■■■□□ 2.65
CCM2-218ENST00000541586 TRAF1Q13077 416 aa31.63■■■□□ 2.65
CCM2-218ENST00000541586 TKFCQ3LXA3 575 aa31.63■■■□□ 2.65
CCM2-218ENST00000541586 KRT25Q7Z3Z0 450 aa31.63■■■□□ 2.65
CCM2-218ENST00000541586 SHCBP1Q8NEM2 672 aa31.63■■■□□ 2.65
CCM2-218ENST00000541586 CHST13Q8NET6 341 aa31.63■■■□□ 2.65
CCM2-218ENST00000541586 ACAD9Q9H845 621 aa31.63■■■□□ 2.65
CCM2-218ENST00000541586 NFIBO00712 420 aa31.62■■■□□ 2.65
CCM2-218ENST00000541586 COPB2P35606 906 aa31.62■■■□□ 2.65
CCM2-218ENST00000541586 CCDC183Q5T5S1 534 aa31.62■■■□□ 2.65
CCM2-218ENST00000541586 GPR142Q7Z601 462 aa31.62■■■□□ 2.65
CCM2-218ENST00000541586 GOLPH3LQ9H4A5 285 aa31.62■■■□□ 2.65
CCM2-218ENST00000541586 BIN2Q9UBW5 565 aaPredicted RBP31.62■■■□□ 2.65
CCM2-218ENST00000541586 IVNS1ABPQ9Y6Y0 642 aa31.62■■■□□ 2.65
CCM2-218ENST00000541586 TNPO2O14787 897 aaKnown RBP31.61■■■□□ 2.65
CCM2-218ENST00000541586 ZNF174Q15697 407 aa31.61■■■□□ 2.65
CCM2-218ENST00000541586 NSMFQ6X4W1 530 aa31.61■■■□□ 2.65
CCM2-218ENST00000541586 CUL5Q93034 780 aa31.61■■■□□ 2.65
CCM2-218ENST00000541586 DACT1Q9NYF0 836 aa31.61■■■□□ 2.65
CCM2-218ENST00000541586 NR1I2O75469 434 aa31.61■■■□□ 2.65
CCM2-218ENST00000541586 PLEKHH3Q7Z736 793 aa31.61■■■□□ 2.65
CCM2-218ENST00000541586 ANKRD35Q8N283 1001 aa31.61■■■□□ 2.65
CCM2-218ENST00000541586 FSIP1Q8NA03 581 aa31.61■■■□□ 2.65
CCM2-218ENST00000541586 CLEC4DQ8WXI8 215 aa31.61■■■□□ 2.65
CCM2-218ENST00000541586 MRPS27Q92552 414 aaKnown RBP31.61■■■□□ 2.65
CCM2-218ENST00000541586 PSTPIP2Q9H939 334 aa31.61■■■□□ 2.65
CCM2-218ENST00000541586 FBXO40Q9UH90 709 aa31.61■■■□□ 2.65
CCM2-218ENST00000541586 BMP15O95972 392 aa31.6■■■□□ 2.65
CCM2-218ENST00000541586 FCGRTP55899 365 aa31.6■■■□□ 2.65
CCM2-218ENST00000541586 CAP1Q01518 475 aa31.6■■■□□ 2.65
CCM2-218ENST00000541586 NONOQ15233 471 aaKnown RBP eCLIP31.6■■■□□ 2.65
CCM2-218ENST00000541586 INF2Q27J81 1249 aa31.6■■■□□ 2.65
CCM2-218ENST00000541586 JAKMIP3Q5VZ66 844 aa31.6■■■□□ 2.65
CCM2-218ENST00000541586 TBC1D5Q92609 795 aa31.6■■■□□ 2.65
CCM2-218ENST00000541586 TRIM47Q96LD4 638 aa31.6■■■□□ 2.65
CCM2-218ENST00000541586 MMP19Q99542 508 aa31.6■■■□□ 2.65
CCM2-218ENST00000541586 TMEM260Q9NX78 707 aa31.6■■■□□ 2.65
CCM2-218ENST00000541586 MORC2Q9Y6X9 1032 aaPredicted RBP31.6■■■□□ 2.65
CCM2-218ENST00000541586 FCER1AP12319 257 aa31.59■■■□□ 2.65
CCM2-218ENST00000541586 MRPL12P52815 198 aaKnown RBP31.59■■■□□ 2.65
CCM2-218ENST00000541586 KRI1Q8N9T8 703 aaKnown RBP31.59■■■□□ 2.65
CCM2-218ENST00000541586 CFBP00751 764 aa31.58■■■□□ 2.65
CCM2-218ENST00000541586 HSPA8P11142 646 aaKnown RBP31.58■■■□□ 2.65
CCM2-218ENST00000541586 LBX1P52954 281 aa31.58■■■□□ 2.65
CCM2-218ENST00000541586 KCTD2Q14681 263 aa31.58■■■□□ 2.65
CCM2-218ENST00000541586 CCDC73Q6ZRK6 1079 aa31.58■■■□□ 2.65
CCM2-218ENST00000541586 ERO1AQ96HE7 468 aa31.58■■■□□ 2.65
CCM2-218ENST00000541586 CLIC6Q96NY7 704 aa31.58■■■□□ 2.65
CCM2-218ENST00000541586 FBXO2Q9UK22 296 aaPredicted RBP31.58■■■□□ 2.65
CCM2-218ENST00000541586 MRVI1Q9Y6F6 885 aa31.58■■■□□ 2.65
CCM2-218ENST00000541586 CUTAO60888 179 aa31.58■■■□□ 2.65
CCM2-218ENST00000541586 PTPREP23469 700 aa31.58■■■□□ 2.65
CCM2-218ENST00000541586 CTCFP49711 727 aaPredicted RBP31.58■■■□□ 2.65
CCM2-218ENST00000541586 CLK2P49760 499 aaKnown RBP31.58■■■□□ 2.65
CCM2-218ENST00000541586 ZNF445P59923 1031 aa31.58■■■□□ 2.65
CCM2-218ENST00000541586 GLT8D2Q9H1C3 349 aa31.58■■■□□ 2.65
CCM2-218ENST00000541586 SYCE3A1L190 88 aa31.57■■■□□ 2.64
CCM2-218ENST00000541586 CMA1P23946 247 aa31.57■■■□□ 2.64
CCM2-218ENST00000541586 UBE2SQ16763 222 aa31.57■■■□□ 2.64
CCM2-218ENST00000541586 DDX19AQ9NUU7 478 aaKnown RBP31.57■■■□□ 2.64
CCM2-218ENST00000541586 MCM7P33993 719 aa31.56■■■□□ 2.64
CCM2-218ENST00000541586 FAM160A1Q05DH4 1040 aa31.56■■■□□ 2.64
CCM2-218ENST00000541586 SNW1Q13573 536 aaKnown RBP31.56■■■□□ 2.64
CCM2-218ENST00000541586 MCF2L2Q86YR7 1114 aa31.56■■■□□ 2.64
CCM2-218ENST00000541586 ENGASEQ8NFI3 743 aa31.56■■■□□ 2.64
CCM2-218ENST00000541586 A1CFQ9NQ94 594 aaKnown RBP31.56■■■□□ 2.64
CCM2-218ENST00000541586 SRPRBQ9Y5M8 271 aaKnown RBP31.56■■■□□ 2.64
CCM2-218ENST00000541586 A0A1B0GVL5 298 aa31.55■■■□□ 2.64
CCM2-218ENST00000541586 OPLAHO14841 1288 aa31.55■■■□□ 2.64
CCM2-218ENST00000541586 STRNO43815 780 aa31.55■■■□□ 2.64
CCM2-218ENST00000541586 PGK2P07205 417 aa31.55■■■□□ 2.64
CCM2-218ENST00000541586 BAATQ14032 418 aaPredicted RBP31.55■■■□□ 2.64
CCM2-218ENST00000541586 SHC4Q6S5L8 630 aa31.55■■■□□ 2.64
CCM2-218ENST00000541586 ATP2C1P98194 919 aaPredicted RBP31.55■■■□□ 2.64
CCM2-218ENST00000541586 PTGDRQ13258 359 aa31.55■■■□□ 2.64
CCM2-218ENST00000541586 RNF207Q6ZRF8 634 aa31.55■■■□□ 2.64
CCM2-218ENST00000541586 TBCKQ8TEA7 893 aa31.55■■■□□ 2.64
CCM2-218ENST00000541586 ADORA2AP29274 412 aa31.54■■■□□ 2.64
CCM2-218ENST00000541586 HOXA13P31271 388 aaPredicted RBP31.54■■■□□ 2.64
CCM2-218ENST00000541586 NDUFA8P51970 172 aa31.54■■■□□ 2.64
CCM2-218ENST00000541586 GRIN1Q05586 938 aa31.54■■■□□ 2.64
CCM2-218ENST00000541586 RPS6P62753 249 aaKnown RBP31.53■■■□□ 2.64
CCM2-218ENST00000541586 USP17L6PQ6QN14 398 aa31.53■■■□□ 2.64
CCM2-218ENST00000541586 NEK8Q86SG6 692 aa31.53■■■□□ 2.64
CCM2-218ENST00000541586 DPP9Q86TI2 863 aa31.53■■■□□ 2.64
CCM2-218ENST00000541586 NUP62CLQ9H1M0 184 aa31.53■■■□□ 2.64
CCM2-218ENST00000541586 CYP39A1Q9NYL5 469 aa31.53■■■□□ 2.64
CCM2-218ENST00000541586 DOCK3Q8IZD9 2030 aa31.53■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms