RNA–Protein interactions for RNA: ENST00000541549.2

EIF3A-203, Transcript of eukaryotic translation initiation factor 3 subunit A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene EIF3A, Length 4,495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3A-203ENST00000541549 PCDHA4Q9UN74 947 aa13.14□□□□□ -0.31
EIF3A-203ENST00000541549 IGKV5-2P06315 115 aa13.14□□□□□ -0.31
EIF3A-203ENST00000541549 RFC1P35251 1148 aaPredicted RBP13.14□□□□□ -0.31
EIF3A-203ENST00000541549 TBCKQ8TEA7 893 aa13.14□□□□□ -0.31
EIF3A-203ENST00000541549 WHAMMQ8TF30 809 aa13.14□□□□□ -0.31
EIF3A-203ENST00000541549 FMO2Q99518 471 aa13.14□□□□□ -0.31
EIF3A-203ENST00000541549 MAGEF1Q9HAY2 307 aa13.14□□□□□ -0.31
EIF3A-203ENST00000541549 MRFAP1Q9Y605 127 aa13.14□□□□□ -0.31
EIF3A-203ENST00000541549 DLATP10515 647 aaKnown RBP13.13□□□□□ -0.31
EIF3A-203ENST00000541549 SNX1Q13596 522 aa13.13□□□□□ -0.31
EIF3A-203ENST00000541549 NUF2Q9BZD4 464 aa13.13□□□□□ -0.31
EIF3A-203ENST00000541549 LARSQ9P2J5 1176 aaKnown RBP13.13□□□□□ -0.31
EIF3A-203ENST00000541549 GINS2Q9Y248 185 aa13.13□□□□□ -0.31
EIF3A-203ENST00000541549 SSX2IPQ9Y2D8 614 aa13.13□□□□□ -0.31
EIF3A-203ENST00000541549 PRR36Q9H6K5 1346 aa13.13□□□□□ -0.31
EIF3A-203ENST00000541549 PRDM15P57071 1507 aaPredicted RBP13.13□□□□□ -0.31
EIF3A-203ENST00000541549 CYP2C19P33261 490 aa13.13□□□□□ -0.31
EIF3A-203ENST00000541549 EIF4G3O43432 1585 aaKnown RBP13.13□□□□□ -0.31
EIF3A-203ENST00000541549 TTC37Q6PGP7 1564 aa13.13□□□□□ -0.31
EIF3A-203ENST00000541549 ABCC12Q96J65 1359 aa13.13□□□□□ -0.31
EIF3A-203ENST00000541549 PRR29P0C7W0 189 aa13.13□□□□□ -0.31
EIF3A-203ENST00000541549 NEK9Q8TD19 979 aa13.13□□□□□ -0.31
EIF3A-203ENST00000541549 RSAD2Q8WXG1 361 aa13.13□□□□□ -0.31
EIF3A-203ENST00000541549 BPIFA3Q9BQP9 254 aa13.13□□□□□ -0.31
EIF3A-203ENST00000541549 TYW1Q9NV66 732 aaKnown RBP13.13□□□□□ -0.31
EIF3A-203ENST00000541549 CASQ2O14958 399 aaPredicted RBP13.13□□□□□ -0.31
EIF3A-203ENST00000541549 CHUKO15111 745 aa13.13□□□□□ -0.31
EIF3A-203ENST00000541549 CLIC2O15247 247 aa13.13□□□□□ -0.31
EIF3A-203ENST00000541549 IL9RQ01113 521 aa13.13□□□□□ -0.31
EIF3A-203ENST00000541549 ZNF710Q8N1W2 664 aa13.13□□□□□ -0.31
EIF3A-203ENST00000541549 AK8Q96MA6 479 aa13.13□□□□□ -0.31
EIF3A-203ENST00000541549 THAP9Q9H5L6 903 aa13.13□□□□□ -0.31
EIF3A-203ENST00000541549 ARHGEF10LQ9HCE6 1279 aa13.13□□□□□ -0.31
EIF3A-203ENST00000541549 TTC26A0AVF1 554 aa13.12□□□□□ -0.31
EIF3A-203ENST00000541549 HMGB1P1B2RPK0 211 aaPredicted RBP13.12□□□□□ -0.31
EIF3A-203ENST00000541549 GFPT2O94808 682 aa13.12□□□□□ -0.31
EIF3A-203ENST00000541549 GTF2IP78347 998 aa13.12□□□□□ -0.31
EIF3A-203ENST00000541549 ACTN3Q08043 901 aaPredicted RBP13.12□□□□□ -0.31
EIF3A-203ENST00000541549 TRAPPC3LQ5T215 181 aa13.12□□□□□ -0.31
EIF3A-203ENST00000541549 ALKBH5Q6P6C2 394 aaKnown RBP13.12□□□□□ -0.31
EIF3A-203ENST00000541549 OTUD6AQ7L8S5 288 aa13.12□□□□□ -0.31
EIF3A-203ENST00000541549 ARMC9Q7Z3E5 817 aa13.12□□□□□ -0.31
EIF3A-203ENST00000541549 ELAC2Q9BQ52 826 aaKnown RBP13.12□□□□□ -0.31
EIF3A-203ENST00000541549 ACTR5Q9H9F9 607 aaPredicted RBP13.12□□□□□ -0.31
EIF3A-203ENST00000541549 SEC31BQ9NQW1 1179 aa13.12□□□□□ -0.31
EIF3A-203ENST00000541549 PLAAQ9Y263 795 aa13.12□□□□□ -0.31
EIF3A-203ENST00000541549 PCDHA1Q9Y5I3 950 aa13.12□□□□□ -0.31
EIF3A-203ENST00000541549 STK24Q9Y6E0 443 aa13.12□□□□□ -0.31
EIF3A-203ENST00000541549 RPAP1Q9BWH6 1393 aaPredicted RBP13.12□□□□□ -0.31
EIF3A-203ENST00000541549 PABPN1LA6NDY0 278 aaKnown RBP13.12□□□□□ -0.31
EIF3A-203ENST00000541549 MYO1FO00160 1098 aa13.12□□□□□ -0.31
EIF3A-203ENST00000541549 LUC7L3O95232 432 aaKnown RBP13.12□□□□□ -0.31
EIF3A-203ENST00000541549 PLEKHA8P1O95397 391 aa13.12□□□□□ -0.31
EIF3A-203ENST00000541549 KRT19P08727 400 aa13.12□□□□□ -0.31
EIF3A-203ENST00000541549 ODR4Q5SWX8 454 aa13.12□□□□□ -0.31
EIF3A-203ENST00000541549 SHC4Q6S5L8 630 aa13.12□□□□□ -0.31
EIF3A-203ENST00000541549 GSDMBQ8TAX9 411 aa13.12□□□□□ -0.31
EIF3A-203ENST00000541549 GRK7Q8WTQ7 553 aa13.12□□□□□ -0.31
EIF3A-203ENST00000541549 MPHOSPH6Q99547 160 aaKnown RBP13.12□□□□□ -0.31
EIF3A-203ENST00000541549 PIH1D3Q9NQM4 214 aaKnown RBP13.12□□□□□ -0.31
EIF3A-203ENST00000541549 CPSF1Q10570 1443 aaKnown RBP13.12□□□□□ -0.31
EIF3A-203ENST00000541549 K7ENM7 598 aa13.12□□□□□ -0.31
EIF3A-203ENST00000541549 SNAP23O00161 211 aa13.12□□□□□ -0.31
EIF3A-203ENST00000541549 NUGGCQ68CJ6 796 aa13.12□□□□□ -0.31
EIF3A-203ENST00000541549 DPP8Q6V1X1 898 aaPredicted RBP13.12□□□□□ -0.31
EIF3A-203ENST00000541549 POLD4Q9HCU8 107 aa13.12□□□□□ -0.31
EIF3A-203ENST00000541549 DNAJC17Q9NVM6 304 aaKnown RBP13.12□□□□□ -0.31
EIF3A-203ENST00000541549 KIF3CO14782 793 aa13.11□□□□□ -0.31
EIF3A-203ENST00000541549 RASGRF2O14827 1237 aa13.11□□□□□ -0.31
EIF3A-203ENST00000541549 RBBP5Q15291 538 aaKnown RBP13.11□□□□□ -0.31
EIF3A-203ENST00000541549 OXER1Q8TDS5 423 aa13.11□□□□□ -0.31
EIF3A-203ENST00000541549 DISC1Q9NRI5 854 aa13.11□□□□□ -0.31
EIF3A-203ENST00000541549 THRAP3Q9Y2W1 955 aaKnown RBP13.11□□□□□ -0.31
EIF3A-203ENST00000541549 LAD1O00515 517 aa13.11□□□□□ -0.31
EIF3A-203ENST00000541549 LMNB1P20700 586 aa13.11□□□□□ -0.31
EIF3A-203ENST00000541549 SRLQ86TD4 932 aa13.11□□□□□ -0.31
EIF3A-203ENST00000541549 CFAP57Q96MR6 1250 aa13.11□□□□□ -0.31
EIF3A-203ENST00000541549 MLXIPQ9HAP2 919 aa13.11□□□□□ -0.31
EIF3A-203ENST00000541549 ASAP1Q9ULH1 1129 aa13.11□□□□□ -0.31
EIF3A-203ENST00000541549 LGALS16A8MUM7 142 aa13.11□□□□□ -0.31
EIF3A-203ENST00000541549 TBC1D10BQ4KMP7 808 aaPredicted RBP13.11□□□□□ -0.31
EIF3A-203ENST00000541549 TBC1D10CQ8IV04 446 aa13.11□□□□□ -0.31
EIF3A-203ENST00000541549 ATP2A3Q93084 1043 aa13.11□□□□□ -0.31
EIF3A-203ENST00000541549 C8orf37Q96NL8 207 aa13.11□□□□□ -0.31
EIF3A-203ENST00000541549 IL25Q9H293 177 aa13.11□□□□□ -0.31
EIF3A-203ENST00000541549 RAB20Q9NX57 234 aa13.11□□□□□ -0.31
EIF3A-203ENST00000541549 ABCA5Q8WWZ7 1642 aa13.11□□□□□ -0.31
EIF3A-203ENST00000541549 CLASP1Q7Z460 1538 aa13.11□□□□□ -0.31
EIF3A-203ENST00000541549 CTIFO43310 598 aaKnown RBP13.11□□□□□ -0.31
EIF3A-203ENST00000541549 PRPF3O43395 683 aaKnown RBP13.11□□□□□ -0.31
EIF3A-203ENST00000541549 AFPP02771 609 aaKnown RBP13.11□□□□□ -0.31
EIF3A-203ENST00000541549 PCP11498 1178 aaKnown RBP13.11□□□□□ -0.31
EIF3A-203ENST00000541549 PRCPP42785 496 aa13.11□□□□□ -0.31
EIF3A-203ENST00000541549 PDE6CP51160 858 aa13.11□□□□□ -0.31
EIF3A-203ENST00000541549 PDE1CQ14123 709 aaPredicted RBP13.11□□□□□ -0.31
EIF3A-203ENST00000541549 RCN2Q14257 317 aa13.11□□□□□ -0.31
EIF3A-203ENST00000541549 TAF11Q15544 211 aa13.11□□□□□ -0.31
EIF3A-203ENST00000541549 GDAP1Q8TB36 358 aa13.11□□□□□ -0.31
EIF3A-203ENST00000541549 STRBPQ96SI9 672 aaKnown RBP13.11□□□□□ -0.31
EIF3A-203ENST00000541549 DDX23Q9BUQ8 820 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms