RNA–Protein interactions for RNA: ENST00000541354.5

SPOCK3-226, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 2 BASIC

Gene SPOCK3, Length 2,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-226ENST00000541354 SPATA1Q5VX52 437 aa16.49■□□□□ 0.23
SPOCK3-226ENST00000541354 CNNM4Q6P4Q7 775 aa16.49■□□□□ 0.23
SPOCK3-226ENST00000541354 APTXQ7Z2E3 356 aaKnown RBP16.49■□□□□ 0.23
SPOCK3-226ENST00000541354 EHMT1Q9H9B1 1298 aa16.49■□□□□ 0.23
SPOCK3-226ENST00000541354 STK17AQ9UEE5 414 aa16.49■□□□□ 0.23
SPOCK3-226ENST00000541354 PRR12Q9ULL5 1215 aa16.49■□□□□ 0.23
SPOCK3-226ENST00000541354 STX10O60499 249 aa16.48■□□□□ 0.23
SPOCK3-226ENST00000541354 SLU7O95391 586 aaKnown RBP16.48■□□□□ 0.23
SPOCK3-226ENST00000541354 SLC16A2P36021 539 aa16.48■□□□□ 0.23
SPOCK3-226ENST00000541354 UBA7P41226 1012 aa16.48■□□□□ 0.23
SPOCK3-226ENST00000541354 ETF1P62495 437 aaKnown RBP16.48■□□□□ 0.23
SPOCK3-226ENST00000541354 KCNB1Q14721 858 aa16.48■□□□□ 0.23
SPOCK3-226ENST00000541354 SPECC1LQ69YQ0 1117 aa16.48■□□□□ 0.23
SPOCK3-226ENST00000541354 REXO1L1PQ8IX06 675 aa16.48■□□□□ 0.23
SPOCK3-226ENST00000541354 DHX58Q96C10 678 aa16.48■□□□□ 0.23
SPOCK3-226ENST00000541354 TMEM60Q9H2L4 133 aa16.48■□□□□ 0.23
SPOCK3-226ENST00000541354 GPRC5DQ9NZD1 345 aa16.48■□□□□ 0.23
SPOCK3-226ENST00000541354 CIITAP33076 1130 aa16.48■□□□□ 0.23
SPOCK3-226ENST00000541354 PRELPP51888 382 aa16.48■□□□□ 0.23
SPOCK3-226ENST00000541354 CALCRLQ16602 461 aa16.48■□□□□ 0.23
SPOCK3-226ENST00000541354 JAKMIP3Q5VZ66 844 aa16.48■□□□□ 0.23
SPOCK3-226ENST00000541354 PPP1R1BQ9UD71 204 aaPredicted RBP16.48■□□□□ 0.23
SPOCK3-226ENST00000541354 Q4G0T1 1027 aa16.47■□□□□ 0.23
SPOCK3-226ENST00000541354 NOL9Q5SY16 702 aaKnown RBP16.47■□□□□ 0.23
SPOCK3-226ENST00000541354 CDKAL1Q5VV42 579 aa16.47■□□□□ 0.23
SPOCK3-226ENST00000541354 TRIM65Q6PJ69 517 aa16.47■□□□□ 0.23
SPOCK3-226ENST00000541354 SLFN12Q8IYM2 578 aa16.47■□□□□ 0.23
SPOCK3-226ENST00000541354 AS3MTQ9HBK9 375 aa16.47■□□□□ 0.23
SPOCK3-226ENST00000541354 HACL1Q9UJ83 578 aa16.47■□□□□ 0.23
SPOCK3-226ENST00000541354 MRPL11Q9Y3B7 192 aaKnown RBP16.47■□□□□ 0.23
SPOCK3-226ENST00000541354 RBBP6Q7Z6E9 1792 aaKnown RBP16.47■□□□□ 0.23
SPOCK3-226ENST00000541354 SREBF1P36956 1147 aa16.47■□□□□ 0.23
SPOCK3-226ENST00000541354 RRAGBQ5VZM2 374 aa16.47■□□□□ 0.23
SPOCK3-226ENST00000541354 GRAMD1CQ8IYS0 662 aa16.47■□□□□ 0.23
SPOCK3-226ENST00000541354 ZNF592Q92610 1267 aa16.47■□□□□ 0.23
SPOCK3-226ENST00000541354 ZNF215Q9UL58 517 aaPredicted RBP16.47■□□□□ 0.23
SPOCK3-226ENST00000541354 ZNF541Q9H0D2 1346 aa16.46■□□□□ 0.23
SPOCK3-226ENST00000541354 GOLGA6L9A6NEM1 432 aa16.46■□□□□ 0.23
SPOCK3-226ENST00000541354 ZSCAN12O43309 604 aa16.46■□□□□ 0.23
SPOCK3-226ENST00000541354 PBX1P40424 430 aa16.46■□□□□ 0.23
SPOCK3-226ENST00000541354 STAT6P42226 847 aa16.46■□□□□ 0.23
SPOCK3-226ENST00000541354 AMPD3Q01432 767 aa16.46■□□□□ 0.23
SPOCK3-226ENST00000541354 COBLL1Q53SF7 1204 aa16.46■□□□□ 0.23
SPOCK3-226ENST00000541354 HYIQ5T013 277 aa16.46■□□□□ 0.23
SPOCK3-226ENST00000541354 SMAP1Q8IYB5 467 aaPredicted RBP16.46■□□□□ 0.23
SPOCK3-226ENST00000541354 PDILTQ8N807 584 aa16.46■□□□□ 0.23
SPOCK3-226ENST00000541354 TC2NQ8N9U0 490 aa16.46■□□□□ 0.23
SPOCK3-226ENST00000541354 NLGN2Q8NFZ4 835 aa16.46■□□□□ 0.23
SPOCK3-226ENST00000541354 ANO3Q9BYT9 981 aa16.46■□□□□ 0.23
SPOCK3-226ENST00000541354 KBTBD4Q9NVX7 518 aa16.46■□□□□ 0.23
SPOCK3-226ENST00000541354 MYH7BA7E2Y1 1941 aa16.46■□□□□ 0.23
SPOCK3-226ENST00000541354 ZC3H4Q9UPT8 1303 aaKnown RBP16.46■□□□□ 0.23
SPOCK3-226ENST00000541354 PPP1R3GB7ZBB8 358 aa16.46■□□□□ 0.23
SPOCK3-226ENST00000541354 MEIS2O14770 477 aa16.46■□□□□ 0.23
SPOCK3-226ENST00000541354 SHROOM1Q2M3G4 852 aaPredicted RBP16.46■□□□□ 0.23
SPOCK3-226ENST00000541354 CABP7Q86V35 215 aa16.45■□□□□ 0.22
SPOCK3-226ENST00000541354 CALML4Q96GE6 196 aa16.45■□□□□ 0.22
SPOCK3-226ENST00000541354 C12orf42Q96LP6 360 aa16.45■□□□□ 0.22
SPOCK3-226ENST00000541354 TMEM260Q9NX78 707 aa16.45■□□□□ 0.22
SPOCK3-226ENST00000541354 KDM3AQ9Y4C1 1321 aa16.45■□□□□ 0.22
SPOCK3-226ENST00000541354 EDIL3O43854 480 aa16.45■□□□□ 0.22
SPOCK3-226ENST00000541354 ACER1Q8TDN7 264 aa16.45■□□□□ 0.22
SPOCK3-226ENST00000541354 CTAGE1Q96RT6 745 aa16.45■□□□□ 0.22
SPOCK3-226ENST00000541354 DDX25Q9UHL0 483 aaKnown RBP16.45■□□□□ 0.22
SPOCK3-226ENST00000541354 LRRC10BA6NIK2 292 aa16.44■□□□□ 0.22
SPOCK3-226ENST00000541354 SLURP2P0DP57 97 aa16.44■□□□□ 0.22
SPOCK3-226ENST00000541354 CDK11BP21127 795 aaKnown RBP16.44■□□□□ 0.22
SPOCK3-226ENST00000541354 SCYL3Q8IZE3 742 aa16.44■□□□□ 0.22
SPOCK3-226ENST00000541354 CCDC47Q96A33 483 aaKnown RBP16.44■□□□□ 0.22
SPOCK3-226ENST00000541354 FAM20AQ96MK3 541 aa16.44■□□□□ 0.22
SPOCK3-226ENST00000541354 PANX2Q96RD6 677 aa16.44■□□□□ 0.22
SPOCK3-226ENST00000541354 KCNMB3Q9NPA1 279 aa16.44■□□□□ 0.22
SPOCK3-226ENST00000541354 SAMSN1Q9NSI8 373 aaKnown RBP16.44■□□□□ 0.22
SPOCK3-226ENST00000541354 CD44P16070 742 aaKnown RBP16.44■□□□□ 0.22
SPOCK3-226ENST00000541354 ECE1P42892 770 aa16.44■□□□□ 0.22
SPOCK3-226ENST00000541354 IKQ13123 557 aaPredicted RBP16.44■□□□□ 0.22
SPOCK3-226ENST00000541354 BAG1Q99933 345 aaPredicted RBP16.44■□□□□ 0.22
SPOCK3-226ENST00000541354 C7orf25Q9BPX7 421 aa16.44■□□□□ 0.22
SPOCK3-226ENST00000541354 SRRTQ9BXP5 876 aaKnown RBP16.44■□□□□ 0.22
SPOCK3-226ENST00000541354 ADD3Q9UEY8 706 aaKnown RBP16.44■□□□□ 0.22
SPOCK3-226ENST00000541354 GJA3Q9Y6H8 435 aa16.44■□□□□ 0.22
SPOCK3-226ENST00000541354 PAPPA2Q9BXP8 1791 aa16.44■□□□□ 0.22
SPOCK3-226ENST00000541354 FECHP22830 423 aa16.43■□□□□ 0.22
SPOCK3-226ENST00000541354 SUPT20HL1Q3ZLR7 823 aa16.43■□□□□ 0.22
SPOCK3-226ENST00000541354 FAM83BQ5T0W9 1011 aa16.43■□□□□ 0.22
SPOCK3-226ENST00000541354 SYT10Q6XYQ8 523 aa16.43■□□□□ 0.22
SPOCK3-226ENST00000541354 ZNF397Q8NF99 534 aaPredicted RBP16.43■□□□□ 0.22
SPOCK3-226ENST00000541354 SPDYE3A6NKU9 549 aa16.43■□□□□ 0.22
SPOCK3-226ENST00000541354 C19orf81C9J6K1 198 aa16.43■□□□□ 0.22
SPOCK3-226ENST00000541354 ZNF658Q5TYW1 1059 aaPredicted RBP16.43■□□□□ 0.22
SPOCK3-226ENST00000541354 FOXR2Q6PJQ5 311 aa16.43■□□□□ 0.22
SPOCK3-226ENST00000541354 POTEDQ86YR6 584 aa16.43■□□□□ 0.22
SPOCK3-226ENST00000541354 PRPF38AQ8NAV1 312 aaKnown RBP16.43■□□□□ 0.22
SPOCK3-226ENST00000541354 NT5C3AQ9H0P0 336 aa16.43■□□□□ 0.22
SPOCK3-226ENST00000541354 ITIH6Q6UXX5 1313 aa16.43■□□□□ 0.22
SPOCK3-226ENST00000541354 PARP14Q460N5 1801 aa16.43■□□□□ 0.22
SPOCK3-226ENST00000541354 PHIPQ8WWQ0 1821 aa16.43■□□□□ 0.22
SPOCK3-226ENST00000541354 TRMT44Q8IYL2 757 aaKnown RBP16.43■□□□□ 0.22
SPOCK3-226ENST00000541354 NAA15Q9BXJ9 866 aaKnown RBP16.43■□□□□ 0.22
SPOCK3-226ENST00000541354 LRWD1Q9UFC0 647 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms