RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 ERVK-24P63145 666 aa19.25■□□□□ 0.67
SPIDR-227ENST00000541342 R3HDM1Q15032 1099 aaKnown RBP19.25■□□□□ 0.67
SPIDR-227ENST00000541342 ARL6IP4Q66PJ3 421 aaKnown RBP19.25■□□□□ 0.67
SPIDR-227ENST00000541342 ZNF713Q8N859 430 aaPredicted RBP19.25■□□□□ 0.67
SPIDR-227ENST00000541342 ACRBPQ8NEB7 543 aa19.25■□□□□ 0.67
SPIDR-227ENST00000541342 AGBL3Q8NEM8 1001 aa19.25■□□□□ 0.67
SPIDR-227ENST00000541342 MTMR8Q96EF0 704 aa19.25■□□□□ 0.67
SPIDR-227ENST00000541342 TMEM260Q9NX78 707 aa19.25■□□□□ 0.67
SPIDR-227ENST00000541342 CALCOCO1Q9P1Z2 691 aa19.25■□□□□ 0.67
SPIDR-227ENST00000541342 BIN2Q9UBW5 565 aaPredicted RBP19.25■□□□□ 0.67
SPIDR-227ENST00000541342 PNMA6FA0A0J9YX94 578 aa19.24■□□□□ 0.67
SPIDR-227ENST00000541342 CDAN1Q8IWY9 1227 aa19.24■□□□□ 0.67
SPIDR-227ENST00000541342 TMOD2Q9NZR1 351 aa19.24■□□□□ 0.67
SPIDR-227ENST00000541342 CDC23Q9UJX2 597 aa19.24■□□□□ 0.67
SPIDR-227ENST00000541342 SHTN1A0MZ66 631 aa19.24■□□□□ 0.67
SPIDR-227ENST00000541342 NFKBIEO00221 500 aa19.24■□□□□ 0.67
SPIDR-227ENST00000541342 RAD21O60216 631 aa19.24■□□□□ 0.67
SPIDR-227ENST00000541342 GH2P01242 217 aa19.24■□□□□ 0.67
SPIDR-227ENST00000541342 CDC25AP30304 524 aa19.24■□□□□ 0.67
SPIDR-227ENST00000541342 KRT25Q7Z3Z0 450 aa19.24■□□□□ 0.67
SPIDR-227ENST00000541342 TAOK3Q9H2K8 898 aa19.24■□□□□ 0.67
SPIDR-227ENST00000541342 CTNND2Q9UQB3 1225 aa19.24■□□□□ 0.67
SPIDR-227ENST00000541342 CCT6AP40227 531 aaKnown RBP19.23■□□□□ 0.67
SPIDR-227ENST00000541342 SLFN13Q68D06 897 aa19.23■□□□□ 0.67
SPIDR-227ENST00000541342 FAM151AQ8WW52 585 aa19.23■□□□□ 0.67
SPIDR-227ENST00000541342 ITIH6Q6UXX5 1313 aa19.23■□□□□ 0.67
SPIDR-227ENST00000541342 NONOQ15233 471 aaKnown RBP eCLIP19.23■□□□□ 0.67
SPIDR-227ENST00000541342 KRT31Q15323 416 aa19.23■□□□□ 0.67
SPIDR-227ENST00000541342 ZNF569Q5MCW4 686 aa19.23■□□□□ 0.67
SPIDR-227ENST00000541342 JAKMIP3Q5VZ66 844 aa19.23■□□□□ 0.67
SPIDR-227ENST00000541342 SGIP1Q9BQI5 828 aa19.23■□□□□ 0.67
SPIDR-227ENST00000541342 IRX5P78411 483 aaPredicted RBP19.23■□□□□ 0.67
SPIDR-227ENST00000541342 BEND6Q5SZJ8 279 aaPredicted RBP19.23■□□□□ 0.67
SPIDR-227ENST00000541342 REXO1Q8N1G1 1221 aaKnown RBP19.23■□□□□ 0.67
SPIDR-227ENST00000541342 MTMR14Q8NCE2 650 aa19.23■□□□□ 0.67
SPIDR-227ENST00000541342 BLZF1Q9H2G9 400 aa19.23■□□□□ 0.67
SPIDR-227ENST00000541342 TULP2O00295 520 aa19.22■□□□□ 0.67
SPIDR-227ENST00000541342 KIF5CO60282 957 aa19.22■□□□□ 0.67
SPIDR-227ENST00000541342 SLC1A4P43007 532 aa19.22■□□□□ 0.67
SPIDR-227ENST00000541342 DCAF4Q8WV16 495 aa19.22■□□□□ 0.67
SPIDR-227ENST00000541342 ZBED3Q96IU2 234 aaPredicted RBP19.22■□□□□ 0.67
SPIDR-227ENST00000541342 CTAGE1Q96RT6 745 aa19.22■□□□□ 0.67
SPIDR-227ENST00000541342 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.22■□□□□ 0.67
SPIDR-227ENST00000541342 RAB21Q9UL25 225 aa19.22■□□□□ 0.67
SPIDR-227ENST00000541342 ZBTB5O15062 677 aa19.22■□□□□ 0.67
SPIDR-227ENST00000541342 ARHGAP25P42331 645 aa19.22■□□□□ 0.67
SPIDR-227ENST00000541342 BRD3Q15059 726 aa19.22■□□□□ 0.67
SPIDR-227ENST00000541342 RBM26Q5T8P6 1007 aaKnown RBP19.22■□□□□ 0.67
SPIDR-227ENST00000541342 PDXDC2PQ6P474 469 aa19.22■□□□□ 0.67
SPIDR-227ENST00000541342 SLC35F6Q8N357 371 aa19.22■□□□□ 0.67
SPIDR-227ENST00000541342 VEZTQ9HBM0 779 aa19.22■□□□□ 0.67
SPIDR-227ENST00000541342 HERC5Q9UII4 1024 aaKnown RBP19.22■□□□□ 0.67
SPIDR-227ENST00000541342 LRRC10BA6NIK2 292 aa19.22■□□□□ 0.67
SPIDR-227ENST00000541342 ADCY7P51828 1080 aa19.22■□□□□ 0.67
SPIDR-227ENST00000541342 LETM2Q2VYF4 491 aa19.22■□□□□ 0.67
SPIDR-227ENST00000541342 MSANTD4Q8NCY6 345 aa19.22■□□□□ 0.67
SPIDR-227ENST00000541342 TBCKQ8TEA7 893 aa19.22■□□□□ 0.67
SPIDR-227ENST00000541342 F5H6K3 240 aa19.21■□□□□ 0.67
SPIDR-227ENST00000541342 LONP1P36776 959 aaKnown RBP19.21■□□□□ 0.67
SPIDR-227ENST00000541342 KLRC3Q07444 240 aa19.21■□□□□ 0.67
SPIDR-227ENST00000541342 CNGA4Q8IV77 575 aa19.21■□□□□ 0.67
SPIDR-227ENST00000541342 HNRNPLLQ8WVV9 542 aaKnown RBP19.21■□□□□ 0.67
SPIDR-227ENST00000541342 NUP88Q99567 741 aaPredicted RBP19.21■□□□□ 0.67
SPIDR-227ENST00000541342 TMEM39BQ9GZU3 492 aa19.21■□□□□ 0.67
SPIDR-227ENST00000541342 ABHD10Q9NUJ1 306 aa19.21■□□□□ 0.67
SPIDR-227ENST00000541342 LIMA1Q9UHB6 759 aaKnown RBP19.21■□□□□ 0.67
SPIDR-227ENST00000541342 A0A1W2PRG0 241 aa19.21■□□□□ 0.67
SPIDR-227ENST00000541342 EDIL3O43854 480 aa19.21■□□□□ 0.67
SPIDR-227ENST00000541342 CCNT1O60563 726 aaKnown RBP19.21■□□□□ 0.67
SPIDR-227ENST00000541342 NBPF9Q3BBW0 867 aa19.21■□□□□ 0.67
SPIDR-227ENST00000541342 GMCL1P1Q8NEA9 526 aa19.21■□□□□ 0.67
SPIDR-227ENST00000541342 SUGCTQ9HAC7 445 aa19.21■□□□□ 0.67
SPIDR-227ENST00000541342 CAPN2P17655 700 aa19.2■□□□□ 0.66
SPIDR-227ENST00000541342 CIAPIN1Q6FI81 312 aa19.2■□□□□ 0.66
SPIDR-227ENST00000541342 NEK8Q86SG6 692 aa19.2■□□□□ 0.66
SPIDR-227ENST00000541342 WNT10BO00744 389 aa19.2■□□□□ 0.66
SPIDR-227ENST00000541342 NDUFB10O96000 172 aa19.2■□□□□ 0.66
SPIDR-227ENST00000541342 PPP1R18Q6NYC8 613 aa19.2■□□□□ 0.66
SPIDR-227ENST00000541342 DTHD1Q6ZMT9 781 aa19.2■□□□□ 0.66
SPIDR-227ENST00000541342 RIC8AQ9NPQ8 531 aa19.2■□□□□ 0.66
SPIDR-227ENST00000541342 PP2D1A8MPX8 630 aa19.19■□□□□ 0.66
SPIDR-227ENST00000541342 CCDC51Q96ER9 411 aa19.19■□□□□ 0.66
SPIDR-227ENST00000541342 PGAP2Q9UHJ9 254 aa19.19■□□□□ 0.66
SPIDR-227ENST00000541342 UBE2SQ16763 222 aa19.19■□□□□ 0.66
SPIDR-227ENST00000541342 QRICH1Q2TAL8 776 aa19.19■□□□□ 0.66
SPIDR-227ENST00000541342 FKBP1CQ5VVH2 108 aa19.19■□□□□ 0.66
SPIDR-227ENST00000541342 CEP112Q8N8E3 955 aa19.19■□□□□ 0.66
SPIDR-227ENST00000541342 JDP2Q8WYK2 163 aa19.19■□□□□ 0.66
SPIDR-227ENST00000541342 TMEM51Q9NW97 253 aa19.19■□□□□ 0.66
SPIDR-227ENST00000541342 ADAM21Q9UKJ8 722 aa19.19■□□□□ 0.66
SPIDR-227ENST00000541342 CTAGE9A4FU28 777 aa19.18■□□□□ 0.66
SPIDR-227ENST00000541342 CLK2P49760 499 aaKnown RBP19.18■□□□□ 0.66
SPIDR-227ENST00000541342 GMCL1Q96IK5 515 aa19.18■□□□□ 0.66
SPIDR-227ENST00000541342 VPS16Q9H269 839 aa19.18■□□□□ 0.66
SPIDR-227ENST00000541342 MYOZ2Q9NPC6 264 aa19.18■□□□□ 0.66
SPIDR-227ENST00000541342 SCAF8Q9UPN6 1271 aaKnown RBP19.18■□□□□ 0.66
SPIDR-227ENST00000541342 BCS1LQ9Y276 419 aa19.18■□□□□ 0.66
SPIDR-227ENST00000541342 LAD1O00515 517 aa19.18■□□□□ 0.66
SPIDR-227ENST00000541342 PRPHP41219 470 aa19.18■□□□□ 0.66
SPIDR-227ENST00000541342 PRELPP51888 382 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms