RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 NEDD1Q8NHV4 660 aa10.65□□□□□ -0.7
CNOT4-212ENST00000541284 SMCR8Q8TEV9 937 aaPredicted RBP10.65□□□□□ -0.7
CNOT4-212ENST00000541284 BAP1Q92560 729 aa10.65□□□□□ -0.7
CNOT4-212ENST00000541284 NUDT12Q9BQG2 462 aa10.65□□□□□ -0.7
CNOT4-212ENST00000541284 RGS17Q9UGC6 210 aaPredicted RBP10.65□□□□□ -0.7
CNOT4-212ENST00000541284 SAP30BPQ9UHR5 308 aaKnown RBP10.65□□□□□ -0.7
CNOT4-212ENST00000541284 SALL4Q9UJQ4 1053 aa10.65□□□□□ -0.7
CNOT4-212ENST00000541284 PLAGL2Q9UPG8 496 aa10.65□□□□□ -0.7
CNOT4-212ENST00000541284 WDR81Q562E7 1941 aa10.65□□□□□ -0.71
CNOT4-212ENST00000541284 SLC37A4O43826 429 aa10.65□□□□□ -0.71
CNOT4-212ENST00000541284 ERLIN1O75477 346 aa10.65□□□□□ -0.71
CNOT4-212ENST00000541284 TSPY3P0CV98 308 aa10.65□□□□□ -0.71
CNOT4-212ENST00000541284 TSPY8P0CW00 308 aa10.65□□□□□ -0.71
CNOT4-212ENST00000541284 CDK8P49336 464 aa10.65□□□□□ -0.71
CNOT4-212ENST00000541284 SPTY2D1Q68D10 685 aaPredicted RBP10.65□□□□□ -0.71
CNOT4-212ENST00000541284 CNNM4Q6P4Q7 775 aa10.65□□□□□ -0.71
CNOT4-212ENST00000541284 USP17L2Q6R6M4 530 aa10.65□□□□□ -0.71
CNOT4-212ENST00000541284 KRT25Q7Z3Z0 450 aa10.65□□□□□ -0.71
CNOT4-212ENST00000541284 KCNK18Q7Z418 384 aa10.65□□□□□ -0.71
CNOT4-212ENST00000541284 NBPF5PQ86XG9 351 aaPredicted RBP10.65□□□□□ -0.71
CNOT4-212ENST00000541284 MAPKAPK5Q8IW41 473 aa10.65□□□□□ -0.71
CNOT4-212ENST00000541284 GOLGA5Q8TBA6 731 aa10.65□□□□□ -0.71
CNOT4-212ENST00000541284 FAM71BQ8TC56 605 aa10.65□□□□□ -0.71
CNOT4-212ENST00000541284 ESYT2A0FGR8 921 aa10.64□□□□□ -0.71
CNOT4-212ENST00000541284 GNPATO15228 680 aa10.64□□□□□ -0.71
CNOT4-212ENST00000541284 CCNT1O60563 726 aaKnown RBP10.64□□□□□ -0.71
CNOT4-212ENST00000541284 TUBBP07437 444 aa10.64□□□□□ -0.71
CNOT4-212ENST00000541284 GTF2E1P29083 439 aaPredicted RBP10.64□□□□□ -0.71
CNOT4-212ENST00000541284 ACTN2P35609 894 aa10.64□□□□□ -0.71
CNOT4-212ENST00000541284 VAV2P52735 878 aa10.64□□□□□ -0.71
CNOT4-212ENST00000541284 TBC1D8BQ0IIM8 1120 aa10.64□□□□□ -0.71
CNOT4-212ENST00000541284 LETM2Q2VYF4 491 aa10.64□□□□□ -0.71
CNOT4-212ENST00000541284 LZTS2Q9BRK4 669 aa10.64□□□□□ -0.71
CNOT4-212ENST00000541284 NUP58Q9BVL2 599 aa10.64□□□□□ -0.71
CNOT4-212ENST00000541284 RIOX1Q9H6W3 641 aa10.64□□□□□ -0.71
CNOT4-212ENST00000541284 A0A0G2JMZ2 1700 aa10.64□□□□□ -0.71
CNOT4-212ENST00000541284 GPR75-ASB3A0A0A6YYF3 556 aa10.64□□□□□ -0.71
CNOT4-212ENST00000541284 SMCO2A6NFE2 343 aa10.64□□□□□ -0.71
CNOT4-212ENST00000541284 TECP42680 631 aa10.64□□□□□ -0.71
CNOT4-212ENST00000541284 LMAN1P49257 510 aa10.64□□□□□ -0.71
CNOT4-212ENST00000541284 KRT83P78385 493 aa10.64□□□□□ -0.71
CNOT4-212ENST00000541284 NONOQ15233 471 aaKnown RBP eCLIP10.64□□□□□ -0.71
CNOT4-212ENST00000541284 ECM1Q16610 540 aa10.64□□□□□ -0.71
CNOT4-212ENST00000541284 NEK8Q86SG6 692 aa10.64□□□□□ -0.71
CNOT4-212ENST00000541284 GSPT2Q8IYD1 628 aaKnown RBP10.64□□□□□ -0.71
CNOT4-212ENST00000541284 WDR66Q8TBY9 1149 aa10.64□□□□□ -0.71
CNOT4-212ENST00000541284 TBCKQ8TEA7 893 aa10.64□□□□□ -0.71
CNOT4-212ENST00000541284 CRAMP1Q96RY5 1269 aa10.64□□□□□ -0.71
CNOT4-212ENST00000541284 SETDB2Q96T68 719 aa10.64□□□□□ -0.71
CNOT4-212ENST00000541284 FEZ2Q9UHY8 353 aaPredicted RBP10.64□□□□□ -0.71
CNOT4-212ENST00000541284 MYH10P35580 1976 aa10.64□□□□□ -0.71
CNOT4-212ENST00000541284 SMARCA1P28370 1054 aa10.64□□□□□ -0.71
CNOT4-212ENST00000541284 FXR2P51116 673 aaKnown RBP eCLIP10.64□□□□□ -0.71
CNOT4-212ENST00000541284 EZH2Q15910 746 aaKnown RBP10.64□□□□□ -0.71
CNOT4-212ENST00000541284 CCDC178Q5BJE1 867 aa10.64□□□□□ -0.71
CNOT4-212ENST00000541284 AENQ8WTP8 325 aaKnown RBP10.64□□□□□ -0.71
CNOT4-212ENST00000541284 CEP95Q96GE4 821 aa10.64□□□□□ -0.71
CNOT4-212ENST00000541284 PIGSQ96S52 555 aa10.64□□□□□ -0.71
CNOT4-212ENST00000541284 SH2D4AQ9H788 454 aa10.64□□□□□ -0.71
CNOT4-212ENST00000541284 MKNK2Q9HBH9 465 aa10.64□□□□□ -0.71
CNOT4-212ENST00000541284 LRWD1Q9UFC0 647 aa10.64□□□□□ -0.71
CNOT4-212ENST00000541284 LEMD3Q9Y2U8 911 aa10.64□□□□□ -0.71
CNOT4-212ENST00000541284 RTCBQ9Y3I0 505 aaKnown RBP10.64□□□□□ -0.71
CNOT4-212ENST00000541284 LCTP09848 1927 aa10.63□□□□□ -0.71
CNOT4-212ENST00000541284 NAPAP54920 295 aa10.63□□□□□ -0.71
CNOT4-212ENST00000541284 STIM1Q13586 685 aa10.63□□□□□ -0.71
CNOT4-212ENST00000541284 TMEM119Q4V9L6 283 aa10.63□□□□□ -0.71
CNOT4-212ENST00000541284 ZCWPW2Q504Y3 356 aa10.63□□□□□ -0.71
CNOT4-212ENST00000541284 HGSNATQ68CP4 663 aa10.63□□□□□ -0.71
CNOT4-212ENST00000541284 CCNI2Q6ZMN8 369 aaPredicted RBP10.63□□□□□ -0.71
CNOT4-212ENST00000541284 MLXIPQ9HAP2 919 aa10.63□□□□□ -0.71
CNOT4-212ENST00000541284 RNF216Q9NWF9 866 aaPredicted RBP10.63□□□□□ -0.71
CNOT4-212ENST00000541284 LRRC37A2A6NM11 1700 aa10.63□□□□□ -0.71
CNOT4-212ENST00000541284 IGKV6D-41A0A0C4DH26 115 aa10.63□□□□□ -0.71
CNOT4-212ENST00000541284 BICDL2A1A5D9 508 aa10.63□□□□□ -0.71
CNOT4-212ENST00000541284 PPP1R11O60927 126 aaPredicted RBP10.63□□□□□ -0.71
CNOT4-212ENST00000541284 ZMYND10O75800 440 aa10.63□□□□□ -0.71
CNOT4-212ENST00000541284 ASIC1P78348 528 aa10.63□□□□□ -0.71
CNOT4-212ENST00000541284 COG1Q8WTW3 980 aa10.63□□□□□ -0.71
CNOT4-212ENST00000541284 HDAC7Q8WUI4 952 aa10.63□□□□□ -0.71
CNOT4-212ENST00000541284 CAPZA3Q96KX2 299 aa10.63□□□□□ -0.71
CNOT4-212ENST00000541284 NOC4LQ9BVI4 516 aaKnown RBP10.63□□□□□ -0.71
CNOT4-212ENST00000541284 GBP3Q9H0R5 595 aa10.63□□□□□ -0.71
CNOT4-212ENST00000541284 SLC39A2Q9NP94 309 aa10.63□□□□□ -0.71
CNOT4-212ENST00000541284 SNX12Q9UMY4 172 aa10.63□□□□□ -0.71
CNOT4-212ENST00000541284 STX8Q9UNK0 236 aa10.63□□□□□ -0.71
CNOT4-212ENST00000541284 ABCB11O95342 1321 aa10.63□□□□□ -0.71
CNOT4-212ENST00000541284 USP17L5A8MUK1 530 aa10.62□□□□□ -0.71
CNOT4-212ENST00000541284 SNHG28P0DPA3 235 aa10.62□□□□□ -0.71
CNOT4-212ENST00000541284 TRIM21P19474 475 aaKnown RBP10.62□□□□□ -0.71
CNOT4-212ENST00000541284 CYLC1P35663 651 aaPredicted RBP10.62□□□□□ -0.71
CNOT4-212ENST00000541284 SLC20A2Q08357 652 aa10.62□□□□□ -0.71
CNOT4-212ENST00000541284 C2orf54Q08AI8 447 aa10.62□□□□□ -0.71
CNOT4-212ENST00000541284 KCNMA1Q12791 1236 aa10.62□□□□□ -0.71
CNOT4-212ENST00000541284 ORC2Q13416 577 aaPredicted RBP10.62□□□□□ -0.71
CNOT4-212ENST00000541284 VWA3BQ502W6 1294 aa10.62□□□□□ -0.71
CNOT4-212ENST00000541284 LRRC31Q6UY01 552 aa10.62□□□□□ -0.71
CNOT4-212ENST00000541284 FAM196AQ6ZSG2 479 aa10.62□□□□□ -0.71
CNOT4-212ENST00000541284 MMGT1Q8N4V1 131 aa10.62□□□□□ -0.71
CNOT4-212ENST00000541284 RIN2Q8WYP3 895 aaPredicted RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms