RNA–Protein interactions for RNA: ENST00000541029.1

ATN1-204, Transcript of atrophin 1, humanhuman

TSL 2

Gene ATN1, Length 855 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-204ENST00000541029 CATIPQ7Z7H3 387 aa23.29■■□□□ 1.32
ATN1-204ENST00000541029 SLC43A3Q8NBI5 491 aa23.29■■□□□ 1.32
ATN1-204ENST00000541029 IGDCC4Q8TDY8 1250 aa23.29■■□□□ 1.32
ATN1-204ENST00000541029 NSUN6Q8TEA1 469 aaKnown RBP23.29■■□□□ 1.32
ATN1-204ENST00000541029 COPS5Q92905 334 aa23.29■■□□□ 1.32
ATN1-204ENST00000541029 PIGSQ96S52 555 aa23.29■■□□□ 1.32
ATN1-204ENST00000541029 LY9Q9HBG7 655 aa23.29■■□□□ 1.32
ATN1-204ENST00000541029 TLR3O15455 904 aaKnown RBP23.28■■□□□ 1.32
ATN1-204ENST00000541029 PRC1O43663 620 aa23.28■■□□□ 1.32
ATN1-204ENST00000541029 CYTH3O43739 400 aa23.28■■□□□ 1.32
ATN1-204ENST00000541029 ARIH2O95376 493 aa23.28■■□□□ 1.32
ATN1-204ENST00000541029 TIMP1P01033 207 aa23.28■■□□□ 1.32
ATN1-204ENST00000541029 CPT1AP50416 773 aa23.28■■□□□ 1.32
ATN1-204ENST00000541029 CREB3L3Q68CJ9 461 aa23.28■■□□□ 1.32
ATN1-204ENST00000541029 DEFB123Q8N688 67 aa23.28■■□□□ 1.32
ATN1-204ENST00000541029 RMDN3Q96TC7 470 aa23.28■■□□□ 1.32
ATN1-204ENST00000541029 MYL10Q9BUA6 226 aa23.28■■□□□ 1.32
ATN1-204ENST00000541029 RIOX1Q9H6W3 641 aa23.28■■□□□ 1.32
ATN1-204ENST00000541029 PCDHA1Q9Y5I3 950 aa23.28■■□□□ 1.32
ATN1-204ENST00000541029 CD4P01730 458 aa23.27■■□□□ 1.32
ATN1-204ENST00000541029 MYL3P08590 195 aa23.27■■□□□ 1.32
ATN1-204ENST00000541029 TXNP10599 105 aaKnown RBP23.27■■□□□ 1.32
ATN1-204ENST00000541029 EIF2AK2P19525 551 aaKnown RBP23.27■■□□□ 1.32
ATN1-204ENST00000541029 HSD17B4P51659 736 aa23.27■■□□□ 1.32
ATN1-204ENST00000541029 CASC1Q6TDU7 716 aa23.27■■□□□ 1.32
ATN1-204ENST00000541029 ZNF654Q8IZM8 581 aa23.27■■□□□ 1.32
ATN1-204ENST00000541029 PPP1R12CQ9BZL4 782 aa23.27■■□□□ 1.32
ATN1-204ENST00000541029 TANC1Q9C0D5 1861 aa23.26■■□□□ 1.31
ATN1-204ENST00000541029 NKRFO15226 690 aaKnown RBP eCLIP23.26■■□□□ 1.31
ATN1-204ENST00000541029 PURAQ00577 322 aaKnown RBP23.26■■□□□ 1.31
ATN1-204ENST00000541029 GHRHRQ02643 423 aa23.26■■□□□ 1.31
ATN1-204ENST00000541029 TTLL4Q14679 1199 aa23.26■■□□□ 1.31
ATN1-204ENST00000541029 ARHGEF16Q5VV41 709 aa23.26■■□□□ 1.31
ATN1-204ENST00000541029 SEPT14Q6ZU15 432 aa23.26■■□□□ 1.31
ATN1-204ENST00000541029 PXMP2Q9NR77 195 aa23.26■■□□□ 1.31
ATN1-204ENST00000541029 POLR3EQ9NVU0 708 aa23.26■■□□□ 1.31
ATN1-204ENST00000541029 DOCK5Q9H7D0 1870 aa23.26■■□□□ 1.31
ATN1-204ENST00000541029 SH2B2O14492 632 aaPredicted RBP23.25■■□□□ 1.31
ATN1-204ENST00000541029 DDAH1O94760 285 aa23.25■■□□□ 1.31
ATN1-204ENST00000541029 MCM5P33992 734 aa23.25■■□□□ 1.31
ATN1-204ENST00000541029 NECTIN1Q15223 517 aa23.25■■□□□ 1.31
ATN1-204ENST00000541029 MFSD5Q6N075 450 aa23.25■■□□□ 1.31
ATN1-204ENST00000541029 RNPC3Q96LT9 517 aaKnown RBP23.25■■□□□ 1.31
ATN1-204ENST00000541029 IWS1Q96ST2 819 aa23.25■■□□□ 1.31
ATN1-204ENST00000541029 GBF1Q92538 1859 aa23.24■■□□□ 1.31
ATN1-204ENST00000541029 B4GALT4O60513 344 aa23.24■■□□□ 1.31
ATN1-204ENST00000541029 HOXA13P31271 388 aaPredicted RBP23.24■■□□□ 1.31
ATN1-204ENST00000541029 STXBP2Q15833 593 aa23.24■■□□□ 1.31
ATN1-204ENST00000541029 CCDC62Q6P9F0 684 aa23.24■■□□□ 1.31
ATN1-204ENST00000541029 PIBF1Q8WXW3 757 aa23.24■■□□□ 1.31
ATN1-204ENST00000541029 TRPV6Q9H1D0 765 aa23.24■■□□□ 1.31
ATN1-204ENST00000541029 SCN5AQ14524 2016 aa23.24■■□□□ 1.31
ATN1-204ENST00000541029 PNMA6FA0A0J9YX94 578 aa23.23■■□□□ 1.31
ATN1-204ENST00000541029 BRDTQ58F21 947 aaPredicted RBP23.23■■□□□ 1.31
ATN1-204ENST00000541029 NFXL1Q6ZNB6 911 aa23.23■■□□□ 1.31
ATN1-204ENST00000541029 CTCFLQ8NI51 663 aaPredicted RBP23.23■■□□□ 1.31
ATN1-204ENST00000541029 MTG1Q9BT17 334 aaPredicted RBP23.23■■□□□ 1.31
ATN1-204ENST00000541029 MTA3Q9BTC8 594 aa23.23■■□□□ 1.31
ATN1-204ENST00000541029 LRRC2Q9BYS8 371 aa23.23■■□□□ 1.31
ATN1-204ENST00000541029 UMODL1Q5DID0 1318 aa23.23■■□□□ 1.31
ATN1-204ENST00000541029 CDH23Q9H251 3354 aa23.23■■□□□ 1.31
ATN1-204ENST00000541029 A6NJR5 290 aa23.22■■□□□ 1.31
ATN1-204ENST00000541029 CDC45O75419 566 aa23.22■■□□□ 1.31
ATN1-204ENST00000541029 NR3C2P08235 984 aa23.22■■□□□ 1.31
ATN1-204ENST00000541029 RXRAP19793 462 aa23.22■■□□□ 1.31
ATN1-204ENST00000541029 CYP2C18P33260 490 aa23.22■■□□□ 1.31
ATN1-204ENST00000541029 LY6KQ17RY6 165 aa23.22■■□□□ 1.31
ATN1-204ENST00000541029 PPP1R13LQ8WUF5 828 aa23.22■■□□□ 1.31
ATN1-204ENST00000541029 TMEM87BQ96K49 555 aa23.22■■□□□ 1.31
ATN1-204ENST00000541029 SEZ6LQ9BYH1 1024 aa23.22■■□□□ 1.31
ATN1-204ENST00000541029 ALDH8A1Q9H2A2 487 aaPredicted RBP23.22■■□□□ 1.31
ATN1-204ENST00000541029 CCDC69A6NI79 296 aa23.21■■□□□ 1.31
ATN1-204ENST00000541029 PLEKHA8P1O95397 391 aa23.21■■□□□ 1.31
ATN1-204ENST00000541029 CSF2RAP15509 400 aa23.21■■□□□ 1.31
ATN1-204ENST00000541029 ARHGAP1Q07960 439 aa23.21■■□□□ 1.31
ATN1-204ENST00000541029 TRAF1Q13077 416 aa23.21■■□□□ 1.31
ATN1-204ENST00000541029 PPIGQ13427 754 aaKnown RBP eCLIP23.21■■□□□ 1.316e-8■■■□□ 15
ATN1-204ENST00000541029 RAB11FIP4Q86YS3 637 aa23.21■■□□□ 1.31
ATN1-204ENST00000541029 IL31RAQ8NI17 732 aa23.21■■□□□ 1.31
ATN1-204ENST00000541029 CCDC136Q96JN2 1154 aa23.21■■□□□ 1.31
ATN1-204ENST00000541029 MAP3K14Q99558 947 aa23.21■■□□□ 1.31
ATN1-204ENST00000541029 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.21■■□□□ 1.31
ATN1-204ENST00000541029 PDCD2LQ9BRP1 358 aa23.21■■□□□ 1.31
ATN1-204ENST00000541029 SPZ1Q9BXG8 430 aa23.21■■□□□ 1.31
ATN1-204ENST00000541029 HIPK3Q9H422 1215 aa23.21■■□□□ 1.31
ATN1-204ENST00000541029 MTMR10Q9NXD2 777 aa23.21■■□□□ 1.31
ATN1-204ENST00000541029 MAP3K20Q9NYL2 800 aaKnown RBP23.21■■□□□ 1.31
ATN1-204ENST00000541029 TRIP12Q14669 1992 aaPredicted RBP23.2■■□□□ 1.3
ATN1-204ENST00000541029 GCOM1H8Y6P7 765 aaPredicted RBP23.2■■□□□ 1.3
ATN1-204ENST00000541029 GH1P01241 217 aa23.2■■□□□ 1.3
ATN1-204ENST00000541029 POLR2MP0CAP2 368 aa23.2■■□□□ 1.3
ATN1-204ENST00000541029 KIF5BP33176 963 aa23.2■■□□□ 1.3
ATN1-204ENST00000541029 TMEM199Q8N511 208 aa23.2■■□□□ 1.3
ATN1-204ENST00000541029 AFG1LQ8WV93 481 aa23.2■■□□□ 1.3
ATN1-204ENST00000541029 NOC4LQ9BVI4 516 aaKnown RBP23.2■■□□□ 1.3
ATN1-204ENST00000541029 TRMT13Q9NUP7 481 aaKnown RBP23.2■■□□□ 1.3
ATN1-204ENST00000541029 EIF3JO75822 258 aaKnown RBP23.19■■□□□ 1.3
ATN1-204ENST00000541029 MMP3P08254 477 aa23.19■■□□□ 1.3
ATN1-204ENST00000541029 MYCLP12524 364 aaPredicted RBP23.19■■□□□ 1.3
ATN1-204ENST00000541029 PGM5Q15124 567 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms