RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 SPATA1Q5VX52 437 aa10.57□□□□□ -0.72
TTC39C-203ENST00000540918 SNRNP48Q6IEG0 339 aaKnown RBP10.57□□□□□ -0.72
TTC39C-203ENST00000540918 ADAT2Q7Z6V5 191 aaKnown RBP10.57□□□□□ -0.72
TTC39C-203ENST00000540918 PHLDB2Q86SQ0 1253 aa10.57□□□□□ -0.72
TTC39C-203ENST00000540918 CTAGE6Q86UF2 777 aa10.57□□□□□ -0.72
TTC39C-203ENST00000540918 LRRC8AQ8IWT6 810 aa10.57□□□□□ -0.72
TTC39C-203ENST00000540918 CTAGE4Q8IX94 777 aa10.57□□□□□ -0.72
TTC39C-203ENST00000540918 CNOT6LQ96LI5 555 aaKnown RBP10.57□□□□□ -0.72
TTC39C-203ENST00000540918 NAP1L4Q99733 375 aaKnown RBP10.57□□□□□ -0.72
TTC39C-203ENST00000540918 TUBGCP2Q9BSJ2 902 aa10.57□□□□□ -0.72
TTC39C-203ENST00000540918 FAM107BQ9H098 131 aa10.57□□□□□ -0.72
TTC39C-203ENST00000540918 GGA3Q9NZ52 723 aa10.57□□□□□ -0.72
TTC39C-203ENST00000540918 MYO1AQ9UBC5 1043 aa10.57□□□□□ -0.72
TTC39C-203ENST00000540918 PXDNLA1KZ92 1463 aa10.57□□□□□ -0.72
TTC39C-203ENST00000540918 GOLGA6L10A6NI86 522 aa10.57□□□□□ -0.72
TTC39C-203ENST00000540918 ORC4O43929 436 aa10.57□□□□□ -0.72
TTC39C-203ENST00000540918 ERLIN2O94905 339 aa10.57□□□□□ -0.72
TTC39C-203ENST00000540918 SLU7O95391 586 aaKnown RBP10.57□□□□□ -0.72
TTC39C-203ENST00000540918 CD19P15391 556 aa10.57□□□□□ -0.72
TTC39C-203ENST00000540918 NR2F2P24468 414 aa10.57□□□□□ -0.72
TTC39C-203ENST00000540918 KLHL30Q0D2K2 578 aa10.57□□□□□ -0.72
TTC39C-203ENST00000540918 KCTD2Q14681 263 aa10.57□□□□□ -0.72
TTC39C-203ENST00000540918 GRM4Q14833 912 aa10.57□□□□□ -0.72
TTC39C-203ENST00000540918 APOL6Q9BWW8 343 aa10.57□□□□□ -0.72
TTC39C-203ENST00000540918 ZNF70Q9UC06 446 aaPredicted RBP10.57□□□□□ -0.72
TTC39C-203ENST00000540918 SMIM23A6NLE4 172 aa10.56□□□□□ -0.72
TTC39C-203ENST00000540918 ENC1O14682 589 aa10.56□□□□□ -0.72
TTC39C-203ENST00000540918 KRT83P78385 493 aa10.56□□□□□ -0.72
TTC39C-203ENST00000540918 ARHGAP4P98171 946 aa10.56□□□□□ -0.72
TTC39C-203ENST00000540918 CYP27A1Q02318 531 aa10.56□□□□□ -0.72
TTC39C-203ENST00000540918 VGLL2Q8N8G2 317 aa10.56□□□□□ -0.72
TTC39C-203ENST00000540918 CEP170P1Q96L14 293 aa10.56□□□□□ -0.72
TTC39C-203ENST00000540918 TMEM60Q9H2L4 133 aa10.56□□□□□ -0.72
TTC39C-203ENST00000540918 BARHL2Q9NY43 387 aa10.56□□□□□ -0.72
TTC39C-203ENST00000540918 ARMCX3Q9UH62 379 aaPredicted RBP10.56□□□□□ -0.72
TTC39C-203ENST00000540918 PAXBP1Q9Y5B6 917 aa10.56□□□□□ -0.72
TTC39C-203ENST00000540918 GPR75-ASB3A0A0A6YYF3 556 aa10.56□□□□□ -0.72
TTC39C-203ENST00000540918 RGPD8O14715 1765 aaPredicted RBP10.56□□□□□ -0.72
TTC39C-203ENST00000540918 LRRN2O75325 713 aa10.56□□□□□ -0.72
TTC39C-203ENST00000540918 PLA2G4BP0C869 781 aa10.56□□□□□ -0.72
TTC39C-203ENST00000540918 XRCC5P13010 732 aaKnown RBP10.56□□□□□ -0.72
TTC39C-203ENST00000540918 GNPTABQ3T906 1256 aa10.56□□□□□ -0.72
TTC39C-203ENST00000540918 CCDC50Q8IVM0 306 aa10.56□□□□□ -0.72
TTC39C-203ENST00000540918 SLC10A4Q96EP9 437 aa10.56□□□□□ -0.72
TTC39C-203ENST00000540918 DISC1Q9NRI5 854 aa10.56□□□□□ -0.72
TTC39C-203ENST00000540918 POTEB2H3BUK9 544 aa10.56□□□□□ -0.72
TTC39C-203ENST00000540918 PDHBP11177 359 aa10.56□□□□□ -0.72
TTC39C-203ENST00000540918 DDX12PQ92771 950 aa10.56□□□□□ -0.72
TTC39C-203ENST00000540918 SPON1Q9HCB6 807 aa10.56□□□□□ -0.72
TTC39C-203ENST00000540918 DDX4Q9NQI0 724 aaKnown RBP10.56□□□□□ -0.72
TTC39C-203ENST00000540918 ZHX1Q9UKY1 873 aaPredicted RBP10.56□□□□□ -0.72
TTC39C-203ENST00000540918 AK9Q5TCS8 1911 aa10.56□□□□□ -0.72
TTC39C-203ENST00000540918 NPHP3-ACAD11A0A0J9YXS1 232 aa10.56□□□□□ -0.72
TTC39C-203ENST00000540918 FCER1AP12319 257 aa10.56□□□□□ -0.72
TTC39C-203ENST00000540918 COPB1P53618 953 aaKnown RBP10.56□□□□□ -0.72
TTC39C-203ENST00000540918 POLGP54098 1239 aaPredicted RBP10.56□□□□□ -0.72
TTC39C-203ENST00000540918 IQCEQ6IPM2 695 aa10.56□□□□□ -0.72
TTC39C-203ENST00000540918 GALNT17Q6IS24 598 aa10.56□□□□□ -0.72
TTC39C-203ENST00000540918 RCSD1Q6JBY9 416 aa10.56□□□□□ -0.72
TTC39C-203ENST00000540918 RNF207Q6ZRF8 634 aa10.56□□□□□ -0.72
TTC39C-203ENST00000540918 SLFN12Q8IYM2 578 aa10.56□□□□□ -0.72
TTC39C-203ENST00000540918 PPM1KQ8N3J5 372 aa10.56□□□□□ -0.72
TTC39C-203ENST00000540918 DEPTORQ8TB45 409 aa10.56□□□□□ -0.72
TTC39C-203ENST00000540918 GSDMAQ96QA5 445 aa10.56□□□□□ -0.72
TTC39C-203ENST00000540918 DEFB129Q9H1M3 183 aa10.56□□□□□ -0.72
TTC39C-203ENST00000540918 ELP3Q9H9T3 547 aa10.56□□□□□ -0.72
TTC39C-203ENST00000540918 USTQ9Y2C2 406 aa10.56□□□□□ -0.72
TTC39C-203ENST00000540918 ADGRB2O60241 1585 aa10.55□□□□□ -0.72
TTC39C-203ENST00000540918 TCRBV5S4A2TA0A5A2 114 aa10.55□□□□□ -0.72
TTC39C-203ENST00000540918 GOLGA6L9A6NEM1 432 aa10.55□□□□□ -0.72
TTC39C-203ENST00000540918 NEBLO76041 1014 aa10.55□□□□□ -0.72
TTC39C-203ENST00000540918 FOSP01100 380 aaPredicted RBP10.55□□□□□ -0.72
TTC39C-203ENST00000540918 TNFAIP3P21580 790 aa10.55□□□□□ -0.72
TTC39C-203ENST00000540918 TRAPPC10P48553 1259 aa10.55□□□□□ -0.72
TTC39C-203ENST00000540918 RBL2Q08999 1139 aa10.55□□□□□ -0.72
TTC39C-203ENST00000540918 ELF2Q15723 593 aa10.55□□□□□ -0.72
TTC39C-203ENST00000540918 RESP18Q5W5W9 173 aa10.55□□□□□ -0.72
TTC39C-203ENST00000540918 RSBN1LQ6PCB5 846 aaPredicted RBP10.55□□□□□ -0.72
TTC39C-203ENST00000540918 ZNF512BQ96KM6 892 aaPredicted RBP10.55□□□□□ -0.72
TTC39C-203ENST00000540918 TRIM6Q9C030 488 aaPredicted RBP10.55□□□□□ -0.72
TTC39C-203ENST00000540918 LARSQ9P2J5 1176 aaKnown RBP10.55□□□□□ -0.72
TTC39C-203ENST00000540918 HNRNPDLO14979 420 aaKnown RBP10.55□□□□□ -0.72
TTC39C-203ENST00000540918 CALUO43852 315 aaPredicted RBP10.55□□□□□ -0.72
TTC39C-203ENST00000540918 IFFO1Q0D2I5 559 aa10.55□□□□□ -0.72
TTC39C-203ENST00000540918 DDIT3P35638 169 aa10.55□□□□□ -0.72
TTC39C-203ENST00000540918 EVCP57679 992 aa10.55□□□□□ -0.72
TTC39C-203ENST00000540918 CXCL9Q07325 125 aa10.55□□□□□ -0.72
TTC39C-203ENST00000540918 ARMCX5Q6P1M9 558 aa10.55□□□□□ -0.72
TTC39C-203ENST00000540918 MAATS1Q7Z4T9 603 aa10.55□□□□□ -0.72
TTC39C-203ENST00000540918 USP37Q86T82 979 aa10.55□□□□□ -0.72
TTC39C-203ENST00000540918 SESTD1Q86VW0 696 aa10.55□□□□□ -0.72
TTC39C-203ENST00000540918 MCF2L2Q86YR7 1114 aa10.55□□□□□ -0.72
TTC39C-203ENST00000540918 JAKMIP2Q96AA8 810 aa10.55□□□□□ -0.72
TTC39C-203ENST00000540918 ABT1Q9ULW3 272 aaKnown RBP10.55□□□□□ -0.72
TTC39C-203ENST00000540918 INO80B-WBP1J3KQ70 363 aa10.54□□□□□ -0.72
TTC39C-203ENST00000540918 SRGAP2CP0DJJ0 459 aa10.54□□□□□ -0.72
TTC39C-203ENST00000540918 MRPS25P82663 173 aaKnown RBP10.54□□□□□ -0.72
TTC39C-203ENST00000540918 ZNF543Q08ER8 600 aa10.54□□□□□ -0.72
TTC39C-203ENST00000540918 POMGNT1Q8WZA1 660 aa10.54□□□□□ -0.72
TTC39C-203ENST00000540918 AGBL1Q96MI9 1066 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms