RNA–Protein interactions for RNA: ENST00000540659.1

PAAF1-209, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 349 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-209ENST00000540659 IQCB1Q15051 598 aa10.78□□□□□ -0.68
PAAF1-209ENST00000540659 RRAGBQ5VZM2 374 aa10.78□□□□□ -0.68
PAAF1-209ENST00000540659 DHX40Q8IX18 779 aaKnown RBP10.78□□□□□ -0.68
PAAF1-209ENST00000540659 ELOA2Q8IYF1 753 aaPredicted RBP10.78□□□□□ -0.68
PAAF1-209ENST00000540659 CPXCR1Q8N123 301 aa10.78□□□□□ -0.68
PAAF1-209ENST00000540659 IQUBQ8NA54 791 aa10.78□□□□□ -0.68
PAAF1-209ENST00000540659 ZNF280CQ8ND82 737 aa10.78□□□□□ -0.68
PAAF1-209ENST00000540659 LPAR1Q92633 364 aa10.78□□□□□ -0.68
PAAF1-209ENST00000540659 AGBL1Q96MI9 1066 aa10.78□□□□□ -0.68
PAAF1-209ENST00000540659 NAP1L4Q99733 375 aaKnown RBP10.78□□□□□ -0.68
PAAF1-209ENST00000540659 PYM1Q9BRP8 204 aaKnown RBP10.78□□□□□ -0.68
PAAF1-209ENST00000540659 RAVER2Q9HCJ3 691 aaKnown RBP10.78□□□□□ -0.68
PAAF1-209ENST00000540659 DISC1Q9NRI5 854 aa10.78□□□□□ -0.68
PAAF1-209ENST00000540659 CCPG1Q9ULG6 757 aa10.78□□□□□ -0.68
PAAF1-209ENST00000540659 ABT1Q9ULW3 272 aaKnown RBP10.78□□□□□ -0.68
PAAF1-209ENST00000540659 MRPL11Q9Y3B7 192 aaKnown RBP10.78□□□□□ -0.68
PAAF1-209ENST00000540659 ZHX2Q9Y6X8 837 aa10.78□□□□□ -0.68
PAAF1-209ENST00000540659 GCOM1H8Y6P7 765 aaPredicted RBP10.77□□□□□ -0.69
PAAF1-209ENST00000540659 SMC2O95347 1197 aa10.77□□□□□ -0.69
PAAF1-209ENST00000540659 CAVIN2O95810 425 aa10.77□□□□□ -0.69
PAAF1-209ENST00000540659 PTMAP06454 111 aaKnown RBP10.77□□□□□ -0.69
PAAF1-209ENST00000540659 POLR2MP0CAP2 368 aa10.77□□□□□ -0.69
PAAF1-209ENST00000540659 FDX1P10109 184 aa10.77□□□□□ -0.69
PAAF1-209ENST00000540659 ALAS1P13196 640 aa10.77□□□□□ -0.69
PAAF1-209ENST00000540659 HMGCS2P54868 508 aa10.77□□□□□ -0.69
PAAF1-209ENST00000540659 UBXN2AP68543 259 aa10.77□□□□□ -0.69
PAAF1-209ENST00000540659 ARHGAP4P98171 946 aa10.77□□□□□ -0.69
PAAF1-209ENST00000540659 E2F4Q16254 413 aa10.77□□□□□ -0.69
PAAF1-209ENST00000540659 PPP4R3AQ6IN85 833 aa10.77□□□□□ -0.69
PAAF1-209ENST00000540659 PDXDC2PQ6P474 469 aa10.77□□□□□ -0.69
PAAF1-209ENST00000540659 SH3RF1Q7Z6J0 888 aa10.77□□□□□ -0.69
PAAF1-209ENST00000540659 PRPF38AQ8NAV1 312 aaKnown RBP10.77□□□□□ -0.69
PAAF1-209ENST00000540659 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.77□□□□□ -0.69
PAAF1-209ENST00000540659 MTMR9Q96QG7 549 aa10.77□□□□□ -0.69
PAAF1-209ENST00000540659 WDR18Q9BV38 432 aa10.77□□□□□ -0.69
PAAF1-209ENST00000540659 GBA2Q9HCG7 927 aaPredicted RBP10.77□□□□□ -0.69
PAAF1-209ENST00000540659 LRWD1Q9UFC0 647 aa10.77□□□□□ -0.69
PAAF1-209ENST00000540659 TLL2Q9Y6L7 1015 aa10.77□□□□□ -0.69
PAAF1-209ENST00000540659 POTEMA6NI47 508 aa10.76□□□□□ -0.69
PAAF1-209ENST00000540659 RASSF10A6NK89 507 aa10.76□□□□□ -0.69
PAAF1-209ENST00000540659 ZBED4O75132 1171 aa10.76□□□□□ -0.69
PAAF1-209ENST00000540659 FOSP01100 380 aaPredicted RBP10.76□□□□□ -0.69
PAAF1-209ENST00000540659 ICAM1P05362 532 aa10.76□□□□□ -0.69
PAAF1-209ENST00000540659 GCFC2P16383 781 aaKnown RBP10.76□□□□□ -0.69
PAAF1-209ENST00000540659 PLCG1P19174 1290 aa10.76□□□□□ -0.69
PAAF1-209ENST00000540659 ZNF76P36508 570 aa10.76□□□□□ -0.69
PAAF1-209ENST00000540659 BACE1P56817 501 aa10.76□□□□□ -0.69
PAAF1-209ENST00000540659 CUL4BQ13620 913 aa10.76□□□□□ -0.69
PAAF1-209ENST00000540659 TTLL12Q14166 644 aaPredicted RBP10.76□□□□□ -0.69
PAAF1-209ENST00000540659 DHX8Q14562 1220 aaKnown RBP10.76□□□□□ -0.69
PAAF1-209ENST00000540659 SAPCD2Q86UD0 394 aa10.76□□□□□ -0.69
PAAF1-209ENST00000540659 CALML4Q96GE6 196 aa10.76□□□□□ -0.69
PAAF1-209ENST00000540659 CDK5RAP3Q96JB5 506 aa10.76□□□□□ -0.69
PAAF1-209ENST00000540659 PDLIM2Q96JY6 352 aa10.76□□□□□ -0.69
PAAF1-209ENST00000540659 AK8Q96MA6 479 aa10.76□□□□□ -0.69
PAAF1-209ENST00000540659 CCSER1Q9C0I3 900 aa10.76□□□□□ -0.69
PAAF1-209ENST00000540659 TTC12Q9H892 705 aaPredicted RBP10.76□□□□□ -0.69
PAAF1-209ENST00000540659 HOMER2Q9NSB8 354 aa10.76□□□□□ -0.69
PAAF1-209ENST00000540659 TMOD4Q9NZQ9 345 aa10.76□□□□□ -0.69
PAAF1-209ENST00000540659 ZNF536O15090 1300 aa10.76□□□□□ -0.69
PAAF1-209ENST00000540659 SMTNL1A8MU46 457 aa10.75□□□□□ -0.69
PAAF1-209ENST00000540659 GTPBP6O43824 516 aaPredicted RBP10.75□□□□□ -0.69
PAAF1-209ENST00000540659 IREB2P48200 963 aaKnown RBP10.75□□□□□ -0.69
PAAF1-209ENST00000540659 SARSP49591 514 aaKnown RBP10.75□□□□□ -0.69
PAAF1-209ENST00000540659 FXR2P51116 673 aaKnown RBP eCLIP10.75□□□□□ -0.69
PAAF1-209ENST00000540659 USP11P51784 963 aa10.75□□□□□ -0.69
PAAF1-209ENST00000540659 TPM4P67936 248 aa10.75□□□□□ -0.69
PAAF1-209ENST00000540659 MAP3K9P80192 1104 aa10.75□□□□□ -0.69
PAAF1-209ENST00000540659 DPYDQ12882 1025 aa10.75□□□□□ -0.69
PAAF1-209ENST00000540659 VGLL4Q14135 290 aa10.75□□□□□ -0.69
PAAF1-209ENST00000540659 MORC3Q14149 939 aa10.75□□□□□ -0.69
PAAF1-209ENST00000540659 PRR16Q569H4 304 aa10.75□□□□□ -0.69
PAAF1-209ENST00000540659 NOL9Q5SY16 702 aaKnown RBP10.75□□□□□ -0.69
PAAF1-209ENST00000540659 MOB2Q70IA6 237 aa10.75□□□□□ -0.69
PAAF1-209ENST00000540659 IGSF22Q8N9C0 903 aa10.75□□□□□ -0.69
PAAF1-209ENST00000540659 SPC24Q8NBT2 197 aa10.75□□□□□ -0.69
PAAF1-209ENST00000540659 SNX29Q8TEQ0 813 aa10.75□□□□□ -0.69
PAAF1-209ENST00000540659 HAS1Q92839 578 aa10.75□□□□□ -0.69
PAAF1-209ENST00000540659 ATG4CQ96DT6 458 aa10.75□□□□□ -0.69
PAAF1-209ENST00000540659 ZFP91Q96JP5 570 aaPredicted RBP10.75□□□□□ -0.69
PAAF1-209ENST00000540659 BPIFA3Q9BQP9 254 aa10.75□□□□□ -0.69
PAAF1-209ENST00000540659 RAB34Q9BZG1 259 aa10.75□□□□□ -0.69
PAAF1-209ENST00000540659 TRIM5Q9C035 493 aa10.75□□□□□ -0.69
PAAF1-209ENST00000540659 EHMT1Q9H9B1 1298 aa10.75□□□□□ -0.69
PAAF1-209ENST00000540659 ELP3Q9H9T3 547 aa10.75□□□□□ -0.69
PAAF1-209ENST00000540659 PPP1R9AQ9ULJ8 1098 aa10.75□□□□□ -0.69
PAAF1-209ENST00000540659 SNCAIPQ9Y6H5 919 aa10.75□□□□□ -0.69
PAAF1-209ENST00000540659 PTPRFP10586 1907 aa10.74□□□□□ -0.69
PAAF1-209ENST00000540659 RLFQ13129 1914 aa10.74□□□□□ -0.69
PAAF1-209ENST00000540659 C19orf81C9J6K1 198 aa10.74□□□□□ -0.69
PAAF1-209ENST00000540659 PIK3CDO00329 1044 aa10.74□□□□□ -0.69
PAAF1-209ENST00000540659 NFIBO00712 420 aa10.74□□□□□ -0.69
PAAF1-209ENST00000540659 BMP6P22004 513 aa10.74□□□□□ -0.69
PAAF1-209ENST00000540659 SREBF1P36956 1147 aa10.74□□□□□ -0.69
PAAF1-209ENST00000540659 VEGFBP49765 207 aa10.74□□□□□ -0.69
PAAF1-209ENST00000540659 HUNKP57058 714 aa10.74□□□□□ -0.69
PAAF1-209ENST00000540659 DEFB115Q30KQ5 88 aa10.74□□□□□ -0.69
PAAF1-209ENST00000540659 NAALADL2Q58DX5 795 aa10.74□□□□□ -0.69
PAAF1-209ENST00000540659 MUM1L1Q5H9M0 696 aa10.74□□□□□ -0.69
PAAF1-209ENST00000540659 NT5DC1Q5TFE4 455 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms