RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 GPATCH4Q5T3I0 446 aaKnown RBP14.65□□□□□ -0.06
COPS7A-211ENST00000540408 MAF1Q9H063 256 aa14.65□□□□□ -0.06
COPS7A-211ENST00000540408 RNF41Q9H4P4 317 aaPredicted RBP14.65□□□□□ -0.06
COPS7A-211ENST00000540408 LRRC37A2A6NM11 1700 aa14.64□□□□□ -0.07
COPS7A-211ENST00000540408 HSPD1P10809 573 aaKnown RBP14.64□□□□□ -0.07
COPS7A-211ENST00000540408 POU3F3P20264 500 aaPredicted RBP14.64□□□□□ -0.07
COPS7A-211ENST00000540408 EDNRBP24530 442 aa14.64□□□□□ -0.07
COPS7A-211ENST00000540408 KCNJ6P48051 423 aa14.64□□□□□ -0.07
COPS7A-211ENST00000540408 PDE1AP54750 535 aa14.64□□□□□ -0.07
COPS7A-211ENST00000540408 MFAP1P55081 439 aaKnown RBP14.64□□□□□ -0.07
COPS7A-211ENST00000540408 RGS22Q8NE09 1264 aa14.64□□□□□ -0.07
COPS7A-211ENST00000540408 ESR2Q92731 530 aa14.64□□□□□ -0.07
COPS7A-211ENST00000540408 VWCEQ96DN2 955 aa14.64□□□□□ -0.07
COPS7A-211ENST00000540408 FAM227BQ96M60 508 aa14.64□□□□□ -0.07
COPS7A-211ENST00000540408 ZMYM6O95789 1325 aa14.64□□□□□ -0.07
COPS7A-211ENST00000540408 TRIM6-TRIM34B2RNG4 842 aa14.63□□□□□ -0.07
COPS7A-211ENST00000540408 BAIAP3O94812 1187 aa14.63□□□□□ -0.07
COPS7A-211ENST00000540408 HAND2P61296 217 aa14.63□□□□□ -0.07
COPS7A-211ENST00000540408 PTGISQ16647 500 aa14.63□□□□□ -0.07
COPS7A-211ENST00000540408 USH1GQ495M9 461 aa14.63□□□□□ -0.07
COPS7A-211ENST00000540408 CCDC178Q5BJE1 867 aa14.63□□□□□ -0.07
COPS7A-211ENST00000540408 HERC6Q8IVU3 1022 aa14.63□□□□□ -0.07
COPS7A-211ENST00000540408 CAGE1Q8TC20 777 aa14.63□□□□□ -0.07
COPS7A-211ENST00000540408 COPS5Q92905 334 aa14.63□□□□□ -0.07
COPS7A-211ENST00000540408 CERS4Q9HA82 394 aa14.63□□□□□ -0.07
COPS7A-211ENST00000540408 COG5Q9UP83 839 aa14.63□□□□□ -0.07
COPS7A-211ENST00000540408 MTCH2Q9Y6C9 303 aa14.63□□□□□ -0.07
COPS7A-211ENST00000540408 GBF1Q92538 1859 aa14.63□□□□□ -0.07
COPS7A-211ENST00000540408 SALL3Q9BXA9 1300 aa14.63□□□□□ -0.07
COPS7A-211ENST00000540408 TTC28Q96AY4 2481 aa14.63□□□□□ -0.07
COPS7A-211ENST00000540408 A0A0D9SFI3 127 aa14.62□□□□□ -0.07
COPS7A-211ENST00000540408 RFXAPO00287 272 aa14.62□□□□□ -0.07
COPS7A-211ENST00000540408 PARNO95453 639 aaKnown RBP14.62□□□□□ -0.07
COPS7A-211ENST00000540408 GH1P01241 217 aa14.62□□□□□ -0.07
COPS7A-211ENST00000540408 SNHG28P0DPA3 235 aa14.62□□□□□ -0.07
COPS7A-211ENST00000540408 BMP1P13497 986 aa14.62□□□□□ -0.07
COPS7A-211ENST00000540408 CASTP20810 708 aaKnown RBP14.62□□□□□ -0.07
COPS7A-211ENST00000540408 NT5C2P49902 561 aa14.62□□□□□ -0.07
COPS7A-211ENST00000540408 STXBP2Q15833 593 aa14.62□□□□□ -0.07
COPS7A-211ENST00000540408 SEPT14Q6ZU15 432 aa14.62□□□□□ -0.07
COPS7A-211ENST00000540408 IQCA1Q86XH1 822 aa14.62□□□□□ -0.07
COPS7A-211ENST00000540408 DGKHQ86XP1 1220 aa14.62□□□□□ -0.07
COPS7A-211ENST00000540408 MCF2L2Q86YR7 1114 aa14.62□□□□□ -0.07
COPS7A-211ENST00000540408 NSUN6Q8TEA1 469 aaKnown RBP14.62□□□□□ -0.07
COPS7A-211ENST00000540408 AFAP1L1Q8TED9 768 aa14.62□□□□□ -0.07
COPS7A-211ENST00000540408 ARNTL2Q8WYA1 636 aa14.62□□□□□ -0.07
COPS7A-211ENST00000540408 ZBED2Q9BTP6 218 aa14.62□□□□□ -0.07
COPS7A-211ENST00000540408 C1QTNF1Q9BXJ1 281 aa14.62□□□□□ -0.07
COPS7A-211ENST00000540408 ZNF213O14771 459 aa14.61□□□□□ -0.07
COPS7A-211ENST00000540408 TLL1O43897 1013 aa14.61□□□□□ -0.07
COPS7A-211ENST00000540408 TFF2Q03403 129 aa14.61□□□□□ -0.07
COPS7A-211ENST00000540408 NMIQ13287 307 aaPredicted RBP14.61□□□□□ -0.07
COPS7A-211ENST00000540408 RILPL2Q969X0 211 aa14.61□□□□□ -0.07
COPS7A-211ENST00000540408 IWS1Q96ST2 819 aa14.61□□□□□ -0.07
COPS7A-211ENST00000540408 UBA5Q9GZZ9 404 aa14.61□□□□□ -0.07
COPS7A-211ENST00000540408 KAT14Q9H8E8 782 aa14.61□□□□□ -0.07
COPS7A-211ENST00000540408 ABCB11O95342 1321 aa14.61□□□□□ -0.07
COPS7A-211ENST00000540408 CCDC171Q6TFL3 1326 aa14.61□□□□□ -0.07
COPS7A-211ENST00000540408 LCTP09848 1927 aa14.6□□□□□ -0.07
COPS7A-211ENST00000540408 GOLGA8HP0CJ92 632 aa14.6□□□□□ -0.07
COPS7A-211ENST00000540408 TAP1Q03518 808 aa14.6□□□□□ -0.07
COPS7A-211ENST00000540408 DGKDQ16760 1214 aa14.6□□□□□ -0.07
COPS7A-211ENST00000540408 LY6KQ17RY6 165 aa14.6□□□□□ -0.07
COPS7A-211ENST00000540408 CHST3Q7LGC8 479 aa14.6□□□□□ -0.07
COPS7A-211ENST00000540408 SESTD1Q86VW0 696 aa14.6□□□□□ -0.07
COPS7A-211ENST00000540408 PPP1R13LQ8WUF5 828 aa14.6□□□□□ -0.07
COPS7A-211ENST00000540408 AFG1LQ8WV93 481 aa14.6□□□□□ -0.07
COPS7A-211ENST00000540408 ZKSCAN3Q9BRR0 538 aa14.6□□□□□ -0.07
COPS7A-211ENST00000540408 KATNAL1Q9BW62 490 aa14.6□□□□□ -0.07
COPS7A-211ENST00000540408 MRPL11Q9Y3B7 192 aaKnown RBP14.6□□□□□ -0.07
COPS7A-211ENST00000540408 DHX16O60231 1041 aaKnown RBP14.59□□□□□ -0.07
COPS7A-211ENST00000540408 ARIH2O95376 493 aa14.59□□□□□ -0.07
COPS7A-211ENST00000540408 MMP3P08254 477 aa14.59□□□□□ -0.07
COPS7A-211ENST00000540408 SELPP16109 830 aa14.59□□□□□ -0.07
COPS7A-211ENST00000540408 KCNQ1P51787 676 aa14.59□□□□□ -0.07
COPS7A-211ENST00000540408 CDC37Q16543 378 aaPredicted RBP14.59□□□□□ -0.07
COPS7A-211ENST00000540408 ASPRV1Q53RT3 343 aa14.59□□□□□ -0.07
COPS7A-211ENST00000540408 ARHGEF16Q5VV41 709 aa14.59□□□□□ -0.07
COPS7A-211ENST00000540408 CCDC62Q6P9F0 684 aa14.59□□□□□ -0.07
COPS7A-211ENST00000540408 ZNF589Q86UQ0 364 aaPredicted RBP14.59□□□□□ -0.07
COPS7A-211ENST00000540408 C7orf31Q8N865 590 aa14.59□□□□□ -0.07
COPS7A-211ENST00000540408 PNMA1Q8ND90 353 aa14.59□□□□□ -0.07
COPS7A-211ENST00000540408 HLA-CQ95604 372 aa14.59□□□□□ -0.07
COPS7A-211ENST00000540408 TAAR1Q96RJ0 339 aa14.59□□□□□ -0.07
COPS7A-211ENST00000540408 RMDN3Q96TC7 470 aa14.59□□□□□ -0.07
COPS7A-211ENST00000540408 CHD9Q3L8U1 2897 aa14.59□□□□□ -0.07
COPS7A-211ENST00000540408 SCN10AQ9Y5Y9 1956 aa14.58□□□□□ -0.07
COPS7A-211ENST00000540408 EFCAB14O75071 495 aa14.58□□□□□ -0.08
COPS7A-211ENST00000540408 GDF6Q6KF10 455 aaPredicted RBP14.58□□□□□ -0.08
COPS7A-211ENST00000540408 CNKSR3Q6P9H4 555 aa14.58□□□□□ -0.08
COPS7A-211ENST00000540408 LRRC8DQ7L1W4 858 aa14.58□□□□□ -0.08
COPS7A-211ENST00000540408 FBXO11Q86XK2 927 aa14.58□□□□□ -0.08
COPS7A-211ENST00000540408 ADGRF4Q8IZF3 695 aa14.58□□□□□ -0.08
COPS7A-211ENST00000540408 SYTL5Q8TDW5 730 aaPredicted RBP14.58□□□□□ -0.08
COPS7A-211ENST00000540408 NECAB3Q96P71 396 aaPredicted RBP14.58□□□□□ -0.08
COPS7A-211ENST00000540408 CRBNQ96SW2 442 aa14.58□□□□□ -0.08
COPS7A-211ENST00000540408 LMCD1Q9NZU5 365 aa14.58□□□□□ -0.08
COPS7A-211ENST00000540408 ABHD14A-ACY1A0A1B0GW23 586 aa14.57□□□□□ -0.08
COPS7A-211ENST00000540408 EIF3JO75822 258 aaKnown RBP14.57□□□□□ -0.08
COPS7A-211ENST00000540408 PARP1P09874 1014 aaKnown RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms