RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 COLQQ9Y215 455 aaPredicted RBP17.44■□□□□ 0.38
UBE3B-212ENST00000540230 KIAA1217Q5T5P2 1943 aa17.43■□□□□ 0.38
UBE3B-212ENST00000540230 DYNC1LI2O43237 492 aaPredicted RBP17.43■□□□□ 0.38
UBE3B-212ENST00000540230 ZBTB43O43298 467 aa17.43■□□□□ 0.38
UBE3B-212ENST00000540230 EPB41L2O43491 1005 aaKnown RBP17.43■□□□□ 0.38
UBE3B-212ENST00000540230 ARIH2O95376 493 aa17.43■□□□□ 0.38
UBE3B-212ENST00000540230 ASGR1P07306 291 aa17.43■□□□□ 0.38
UBE3B-212ENST00000540230 CDC27P30260 824 aa17.43■□□□□ 0.38
UBE3B-212ENST00000540230 NKX3-2P78367 333 aa17.43■□□□□ 0.38
UBE3B-212ENST00000540230 TRIM60Q495X7 471 aa17.43■□□□□ 0.38
UBE3B-212ENST00000540230 NSUN6Q8TEA1 469 aaKnown RBP17.43■□□□□ 0.38
UBE3B-212ENST00000540230 BRF1Q92994 677 aa17.43■□□□□ 0.38
UBE3B-212ENST00000540230 TSEN34Q9BSV6 310 aaKnown RBP17.43■□□□□ 0.38
UBE3B-212ENST00000540230 WDR11Q9BZH6 1224 aa17.43■□□□□ 0.38
UBE3B-212ENST00000540230 ATP11BQ9Y2G3 1177 aa17.43■□□□□ 0.38
UBE3B-212ENST00000540230 GOLGA8AA7E2F4 631 aa17.42■□□□□ 0.38
UBE3B-212ENST00000540230 GOLGA8BA8MQT2 603 aa17.42■□□□□ 0.38
UBE3B-212ENST00000540230 FUT2Q10981 343 aa17.42■□□□□ 0.38
UBE3B-212ENST00000540230 RTN1Q16799 776 aa17.42■□□□□ 0.38
UBE3B-212ENST00000540230 DUSP28Q4G0W2 176 aa17.42■□□□□ 0.38
UBE3B-212ENST00000540230 GNASQ5JWF2 1037 aa17.42■□□□□ 0.38
UBE3B-212ENST00000540230 ARHGEF16Q5VV41 709 aa17.42■□□□□ 0.38
UBE3B-212ENST00000540230 SYNE3Q6ZMZ3 975 aa17.42■□□□□ 0.38
UBE3B-212ENST00000540230 IL31RAQ8NI17 732 aa17.42■□□□□ 0.38
UBE3B-212ENST00000540230 COPS5Q92905 334 aa17.42■□□□□ 0.38
UBE3B-212ENST00000540230 AGXT2Q9BYV1 514 aa17.42■□□□□ 0.38
UBE3B-212ENST00000540230 MOXD2PA6NHM9 499 aa17.42■□□□□ 0.38
UBE3B-212ENST00000540230 FCHSD1Q86WN1 690 aa17.42■□□□□ 0.38
UBE3B-212ENST00000540230 PDCD2LQ9BRP1 358 aa17.42■□□□□ 0.38
UBE3B-212ENST00000540230 PRO3102Q9H379 93 aa17.42■□□□□ 0.38
UBE3B-212ENST00000540230 SPC25Q9HBM1 224 aa17.42■□□□□ 0.38
UBE3B-212ENST00000540230 SEC63Q9UGP8 760 aaKnown RBP17.42■□□□□ 0.38
UBE3B-212ENST00000540230 NAP1L2Q9ULW6 460 aaPredicted RBP17.42■□□□□ 0.38
UBE3B-212ENST00000540230 GCOM1H8Y6P7 765 aaPredicted RBP17.41■□□□□ 0.38
UBE3B-212ENST00000540230 NR3C2P08235 984 aa17.41■□□□□ 0.38
UBE3B-212ENST00000540230 POLR2MP0CAP2 368 aa17.41■□□□□ 0.38
UBE3B-212ENST00000540230 FGD1P98174 961 aa17.41■□□□□ 0.38
UBE3B-212ENST00000540230 TRAF1Q13077 416 aa17.41■□□□□ 0.38
UBE3B-212ENST00000540230 FSCN1Q16658 493 aaKnown RBP17.41■□□□□ 0.38
UBE3B-212ENST00000540230 GPKOWQ92917 476 aaPredicted RBP eCLIP17.41■□□□□ 0.38
UBE3B-212ENST00000540230 ZFP91Q96JP5 570 aaPredicted RBP17.41■□□□□ 0.38
UBE3B-212ENST00000540230 IWS1Q96ST2 819 aa17.41■□□□□ 0.38
UBE3B-212ENST00000540230 MPHOSPH6Q99547 160 aaKnown RBP17.41■□□□□ 0.38
UBE3B-212ENST00000540230 ZSWIM6Q9HCJ5 1215 aa17.41■□□□□ 0.38
UBE3B-212ENST00000540230 STARD7Q9NQZ5 370 aa17.41■□□□□ 0.38
UBE3B-212ENST00000540230 RBM28Q9NW13 759 aaKnown RBP17.41■□□□□ 0.38
UBE3B-212ENST00000540230 MAP3K20Q9NYL2 800 aaKnown RBP17.41■□□□□ 0.38
UBE3B-212ENST00000540230 LTBP2Q14767 1821 aa17.4■□□□□ 0.38
UBE3B-212ENST00000540230 PSMA5P28066 241 aa17.4■□□□□ 0.38
UBE3B-212ENST00000540230 ADD1P35611 737 aaKnown RBP17.4■□□□□ 0.38
UBE3B-212ENST00000540230 PGM5Q15124 567 aa17.4■□□□□ 0.38
UBE3B-212ENST00000540230 PPP2R5BQ15173 497 aa17.4■□□□□ 0.38
UBE3B-212ENST00000540230 STXBP2Q15833 593 aa17.4■□□□□ 0.38
UBE3B-212ENST00000540230 C1orf53Q5VUE5 145 aa17.4■□□□□ 0.38
UBE3B-212ENST00000540230 USP17L6PQ6QN14 398 aa17.4■□□□□ 0.38
UBE3B-212ENST00000540230 CXCL17Q6UXB2 119 aa17.4■□□□□ 0.38
UBE3B-212ENST00000540230 SEPT14Q6ZU15 432 aa17.4■□□□□ 0.38
UBE3B-212ENST00000540230 RUFY3Q7L099 469 aa17.4■□□□□ 0.38
UBE3B-212ENST00000540230 FBXL16Q8N461 479 aa17.4■□□□□ 0.38
UBE3B-212ENST00000540230 PCSK9Q8NBP7 692 aaKnown RBP17.4■□□□□ 0.38
UBE3B-212ENST00000540230 SCFD2Q8WU76 684 aa17.4■□□□□ 0.38
UBE3B-212ENST00000540230 UPF3BQ9BZI7 483 aaKnown RBP17.4■□□□□ 0.38
UBE3B-212ENST00000540230 AP5M1Q9H0R1 490 aa17.4■□□□□ 0.38
UBE3B-212ENST00000540230 RBM27Q9P2N5 1060 aaKnown RBP17.4■□□□□ 0.38
UBE3B-212ENST00000540230 Q9Y3F1 56 aa17.4■□□□□ 0.38
UBE3B-212ENST00000540230 B4DLN1 442 aa17.39■□□□□ 0.37
UBE3B-212ENST00000540230 MEIS2O14770 477 aa17.39■□□□□ 0.37
UBE3B-212ENST00000540230 RGS20O76081 388 aa17.39■□□□□ 0.37
UBE3B-212ENST00000540230 TXNP10599 105 aaKnown RBP17.39■□□□□ 0.37
UBE3B-212ENST00000540230 METAP2P50579 478 aaKnown RBP eCLIP17.39■□□□□ 0.37
UBE3B-212ENST00000540230 MRPL12P52815 198 aaKnown RBP17.39■□□□□ 0.37
UBE3B-212ENST00000540230 TLE2Q04725 743 aa17.39■□□□□ 0.37
UBE3B-212ENST00000540230 TOB2Q14106 344 aaPredicted RBP17.39■□□□□ 0.37
UBE3B-212ENST00000540230 TYW1BQ6NUM6 668 aa17.39■□□□□ 0.37
UBE3B-212ENST00000540230 CCDC62Q6P9F0 684 aa17.39■□□□□ 0.37
UBE3B-212ENST00000540230 SH3RF1Q7Z6J0 888 aa17.39■□□□□ 0.37
UBE3B-212ENST00000540230 SAMD3Q8N6K7 520 aa17.39■□□□□ 0.37
UBE3B-212ENST00000540230 TRIOBPQ9H2D6 2365 aa17.39■□□□□ 0.37
UBE3B-212ENST00000540230 SEC24BO95487 1268 aa17.38■□□□□ 0.37
UBE3B-212ENST00000540230 MYCLP12524 364 aaPredicted RBP17.38■□□□□ 0.37
UBE3B-212ENST00000540230 MAGEA10P43363 369 aaPredicted RBP17.38■□□□□ 0.37
UBE3B-212ENST00000540230 RCAN1P53805 252 aa17.38■□□□□ 0.37
UBE3B-212ENST00000540230 LY6KQ17RY6 165 aa17.38■□□□□ 0.37
UBE3B-212ENST00000540230 HABP4Q5JVS0 413 aaKnown RBP17.38■□□□□ 0.37
UBE3B-212ENST00000540230 WWC2Q6AWC2 1192 aa17.38■□□□□ 0.37
UBE3B-212ENST00000540230 HEATR3Q7Z4Q2 680 aa17.38■□□□□ 0.37
UBE3B-212ENST00000540230 OR6J1Q8NGC5 347 aa17.38■□□□□ 0.37
UBE3B-212ENST00000540230 GLT1D1Q96MS3 346 aa17.38■□□□□ 0.37
UBE3B-212ENST00000540230 GDF15Q99988 308 aa17.38■□□□□ 0.37
UBE3B-212ENST00000540230 LARP6Q9BRS8 491 aaKnown RBP17.38■□□□□ 0.37
UBE3B-212ENST00000540230 PDLIM7Q9NR12 457 aa17.38■□□□□ 0.37
UBE3B-212ENST00000540230 NID2Q14112 1375 aa17.38■□□□□ 0.37
UBE3B-212ENST00000540230 SZT2Q5T011 3432 aa17.38■□□□□ 0.37
UBE3B-212ENST00000540230 FRMPD4Q14CM0 1322 aa17.38■□□□□ 0.37
UBE3B-212ENST00000540230 PQBP1O60828 265 aaKnown RBP17.37■□□□□ 0.37
UBE3B-212ENST00000540230 TTLL4Q14679 1199 aa17.37■□□□□ 0.37
UBE3B-212ENST00000540230 UBE2SQ16763 222 aa17.37■□□□□ 0.37
UBE3B-212ENST00000540230 TM6SF1Q9BZW5 370 aa17.37■□□□□ 0.37
UBE3B-212ENST00000540230 V9GY48 417 aaPredicted RBP17.37■□□□□ 0.37
UBE3B-212ENST00000540230 GRIN2DO15399 1336 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms