RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 SAMD3Q8N6K7 520 aa19.07■□□□□ 0.64
COPS3-212ENST00000539941 DHX58Q96C10 678 aa19.07■□□□□ 0.64
COPS3-212ENST00000539941 CDCA5Q96FF9 252 aa19.07■□□□□ 0.64
COPS3-212ENST00000539941 NAT10Q9H0A0 1025 aaKnown RBP19.07■□□□□ 0.64
COPS3-212ENST00000539941 EHMT1Q9H9B1 1298 aa19.07■□□□□ 0.64
COPS3-212ENST00000539941 TMOD4Q9NZQ9 345 aa19.07■□□□□ 0.64
COPS3-212ENST00000539941 CCPG1Q9ULG6 757 aa19.07■□□□□ 0.64
COPS3-212ENST00000539941 CLEC11AQ9Y240 323 aa19.07■□□□□ 0.64
COPS3-212ENST00000539941 OTOFQ9HC10 1997 aa19.07■□□□□ 0.64
COPS3-212ENST00000539941 ZNF536O15090 1300 aa19.07■□□□□ 0.64
COPS3-212ENST00000539941 PASKQ96RG2 1323 aa19.07■□□□□ 0.64
COPS3-212ENST00000539941 SLC37A4O43826 429 aa19.06■□□□□ 0.64
COPS3-212ENST00000539941 ZBED4O75132 1171 aa19.06■□□□□ 0.64
COPS3-212ENST00000539941 UBA7P41226 1012 aa19.06■□□□□ 0.64
COPS3-212ENST00000539941 ZNF165P49910 485 aa19.06■□□□□ 0.64
COPS3-212ENST00000539941 NLRP12P59046 1061 aa19.06■□□□□ 0.64
COPS3-212ENST00000539941 GHRHRQ02643 423 aa19.06■□□□□ 0.64
COPS3-212ENST00000539941 IGSF22Q8N9C0 903 aa19.06■□□□□ 0.64
COPS3-212ENST00000539941 DNAJC25Q9H1X3 360 aa19.06■□□□□ 0.64
COPS3-212ENST00000539941 PCNTO95613 3336 aa19.06■□□□□ 0.64
COPS3-212ENST00000539941 CYP3A4P08684 503 aa19.05■□□□□ 0.64
COPS3-212ENST00000539941 CIITAP33076 1130 aa19.05■□□□□ 0.64
COPS3-212ENST00000539941 HMGCS2P54868 508 aa19.05■□□□□ 0.64
COPS3-212ENST00000539941 PNOCQ13519 176 aa19.05■□□□□ 0.64
COPS3-212ENST00000539941 PRKG1Q13976 671 aa19.05■□□□□ 0.64
COPS3-212ENST00000539941 PDIA5Q14554 519 aa19.05■□□□□ 0.64
COPS3-212ENST00000539941 NT5DC1Q5TFE4 455 aa19.05■□□□□ 0.64
COPS3-212ENST00000539941 MAP1SQ66K74 1059 aaPredicted RBP19.05■□□□□ 0.64
COPS3-212ENST00000539941 SH3RF1Q7Z6J0 888 aa19.05■□□□□ 0.64
COPS3-212ENST00000539941 CBX8Q9HC52 389 aa19.05■□□□□ 0.64
COPS3-212ENST00000539941 MAP3K20Q9NYL2 800 aaKnown RBP19.05■□□□□ 0.64
COPS3-212ENST00000539941 CCDC39Q9UFE4 941 aa19.05■□□□□ 0.64
COPS3-212ENST00000539941 CTDP1Q9Y5B0 961 aaPredicted RBP19.05■□□□□ 0.64
COPS3-212ENST00000539941 SMCHD1A6NHR9 2005 aa19.05■□□□□ 0.64
COPS3-212ENST00000539941 DGKZQ13574 1117 aa19.05■□□□□ 0.64
COPS3-212ENST00000539941 SAMD1Q6SPF0 538 aaPredicted RBP19.05■□□□□ 0.64
COPS3-212ENST00000539941 MCF2L2Q86YR7 1114 aa19.05■□□□□ 0.64
COPS3-212ENST00000539941 ERCC4Q92889 916 aaPredicted RBP19.05■□□□□ 0.64
COPS3-212ENST00000539941 P2RX7Q99572 595 aaKnown RBP19.05■□□□□ 0.64
COPS3-212ENST00000539941 CUEDC2Q9H467 287 aa19.05■□□□□ 0.64
COPS3-212ENST00000539941 DISC1Q9NRI5 854 aa19.05■□□□□ 0.64
COPS3-212ENST00000539941 MYPNQ86TC9 1320 aa19.04■□□□□ 0.64
COPS3-212ENST00000539941 TBX3O15119 743 aa19.04■□□□□ 0.64
COPS3-212ENST00000539941 SMC2O95347 1197 aa19.04■□□□□ 0.64
COPS3-212ENST00000539941 CFBP00751 764 aa19.04■□□□□ 0.64
COPS3-212ENST00000539941 TAL1P17542 331 aaPredicted RBP19.04■□□□□ 0.64
COPS3-212ENST00000539941 HOXA13P31271 388 aaPredicted RBP19.04■□□□□ 0.64
COPS3-212ENST00000539941 OAZ1P54368 228 aa19.04■□□□□ 0.64
COPS3-212ENST00000539941 Q4G0T1 1027 aa19.04■□□□□ 0.64
COPS3-212ENST00000539941 ANKRD13AQ8IZ07 590 aa19.04■□□□□ 0.64
COPS3-212ENST00000539941 TRIML1Q8N9V2 468 aa19.04■□□□□ 0.64
COPS3-212ENST00000539941 AGBL1Q96MI9 1066 aa19.04■□□□□ 0.64
COPS3-212ENST00000539941 BPIFA3Q9BQP9 254 aa19.04■□□□□ 0.64
COPS3-212ENST00000539941 MAGEF1Q9HAY2 307 aa19.04■□□□□ 0.64
COPS3-212ENST00000539941 RABGAP1Q9Y3P9 1069 aa19.04■□□□□ 0.64
COPS3-212ENST00000539941 PCDHA5Q9Y5H7 936 aa19.04■□□□□ 0.64
COPS3-212ENST00000539941 RLFQ13129 1914 aa19.03■□□□□ 0.64
COPS3-212ENST00000539941 VWA5AO00534 786 aa19.03■□□□□ 0.64
COPS3-212ENST00000539941 DSG3P32926 999 aa19.03■□□□□ 0.64
COPS3-212ENST00000539941 TXKP42681 527 aa19.03■□□□□ 0.64
COPS3-212ENST00000539941 SARSP49591 514 aaKnown RBP19.03■□□□□ 0.64
COPS3-212ENST00000539941 HSD17B4P51659 736 aa19.03■□□□□ 0.64
COPS3-212ENST00000539941 DMTNQ08495 405 aa19.03■□□□□ 0.64
COPS3-212ENST00000539941 COG2Q14746 738 aa19.03■□□□□ 0.64
COPS3-212ENST00000539941 PDXDC2PQ6P474 469 aa19.03■□□□□ 0.64
COPS3-212ENST00000539941 SLFN12Q8IYM2 578 aa19.03■□□□□ 0.64
COPS3-212ENST00000539941 SPATA20Q8TB22 786 aa19.03■□□□□ 0.64
COPS3-212ENST00000539941 SMARCE1Q969G3 411 aa19.03■□□□□ 0.64
COPS3-212ENST00000539941 PAGE5Q96GU1 130 aa19.03■□□□□ 0.64
COPS3-212ENST00000539941 KCNMB3Q9NPA1 279 aa19.03■□□□□ 0.64
COPS3-212ENST00000539941 CREBZFQ9NS37 354 aa19.03■□□□□ 0.64
COPS3-212ENST00000539941 ADAMTS5Q9UNA0 930 aa19.03■□□□□ 0.64
COPS3-212ENST00000539941 SLC26A4O43511 780 aa19.02■□□□□ 0.64
COPS3-212ENST00000539941 PTPRFP10586 1907 aa19.02■□□□□ 0.64
COPS3-212ENST00000539941 STAT6P42226 847 aa19.02■□□□□ 0.64
COPS3-212ENST00000539941 TECP42680 631 aa19.02■□□□□ 0.64
COPS3-212ENST00000539941 PPATQ06203 517 aa19.02■□□□□ 0.64
COPS3-212ENST00000539941 DLK2Q6UY11 383 aa19.02■□□□□ 0.64
COPS3-212ENST00000539941 CATSPERGQ6ZRH7 1159 aa19.02■□□□□ 0.64
COPS3-212ENST00000539941 C11orf57Q6ZUT1 292 aaPredicted RBP19.02■□□□□ 0.64
COPS3-212ENST00000539941 RBBP6Q7Z6E9 1792 aaKnown RBP19.02■□□□□ 0.64
COPS3-212ENST00000539941 CABP7Q86V35 215 aa19.02■□□□□ 0.64
COPS3-212ENST00000539941 GTPBP4Q9BZE4 634 aaKnown RBP19.02■□□□□ 0.64
COPS3-212ENST00000539941 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.01■□□□□ 0.63
COPS3-212ENST00000539941 FOXN1O15353 648 aa19.01■□□□□ 0.63
COPS3-212ENST00000539941 MYL1P05976 194 aa19.01■□□□□ 0.63
COPS3-212ENST00000539941 RRAGBQ5VZM2 374 aa19.01■□□□□ 0.63
COPS3-212ENST00000539941 ERO1BQ86YB8 467 aa19.01■□□□□ 0.63
COPS3-212ENST00000539941 RASSF8Q8NHQ8 419 aa19.01■□□□□ 0.63
COPS3-212ENST00000539941 CLEC4DQ8WXI8 215 aa19.01■□□□□ 0.63
COPS3-212ENST00000539941 HAS1Q92839 578 aa19.01■□□□□ 0.63
COPS3-212ENST00000539941 ATG4CQ96DT6 458 aa19.01■□□□□ 0.63
COPS3-212ENST00000539941 MAF1Q9H063 256 aa19.01■□□□□ 0.63
COPS3-212ENST00000539941 TTC12Q9H892 705 aaPredicted RBP19.01■□□□□ 0.63
COPS3-212ENST00000539941 RAVER2Q9HCJ3 691 aaKnown RBP19.01■□□□□ 0.63
COPS3-212ENST00000539941 LRWD1Q9UFC0 647 aa19.01■□□□□ 0.63
COPS3-212ENST00000539941 ATP2A1O14983 1001 aa19.01■□□□□ 0.63
COPS3-212ENST00000539941 MARCH6O60337 910 aa19.01■□□□□ 0.63
COPS3-212ENST00000539941 KARSQ15046 597 aaKnown RBP19.01■□□□□ 0.63
COPS3-212ENST00000539941 IQCB1Q15051 598 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms