RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 DDR1Q08345 913 aa15.7■□□□□ 0.1
UBE3B-210ENST00000539599 TRIM14Q14142 442 aa15.7■□□□□ 0.1
UBE3B-210ENST00000539599 FKBP15Q5T1M5 1219 aa15.7■□□□□ 0.1
UBE3B-210ENST00000539599 GNA11P29992 359 aa15.69■□□□□ 0.1
UBE3B-210ENST00000539599 PRPHP41219 470 aa15.69■□□□□ 0.1
UBE3B-210ENST00000539599 TMC4Q7Z404 712 aa15.69■□□□□ 0.1
UBE3B-210ENST00000539599 C2CD5Q86YS7 1000 aa15.69■□□□□ 0.1
UBE3B-210ENST00000539599 SNX29Q8TEQ0 813 aa15.69■□□□□ 0.1
UBE3B-210ENST00000539599 PLEKHA4Q9H4M7 779 aa15.69■□□□□ 0.1
UBE3B-210ENST00000539599 MMRN2Q9H8L6 949 aa15.69■□□□□ 0.1
UBE3B-210ENST00000539599 VPS18Q9P253 973 aa15.69■□□□□ 0.1
UBE3B-210ENST00000539599 CXCR5P32302 372 aa15.69■□□□□ 0.1
UBE3B-210ENST00000539599 NFIAQ12857 509 aa15.69■□□□□ 0.1
UBE3B-210ENST00000539599 TSR1Q2NL82 804 aaKnown RBP15.69■□□□□ 0.1
UBE3B-210ENST00000539599 TRAPPC11Q7Z392 1133 aa15.69■□□□□ 0.1
UBE3B-210ENST00000539599 C7orf25Q9BPX7 421 aa15.69■□□□□ 0.1
UBE3B-210ENST00000539599 MTMR4Q9NYA4 1195 aa15.69■□□□□ 0.1
UBE3B-210ENST00000539599 CAPN6Q9Y6Q1 641 aa15.69■□□□□ 0.1
UBE3B-210ENST00000539599 A0A1W2PQC6 194 aa15.68■□□□□ 0.1
UBE3B-210ENST00000539599 USP17L10C9JJH3 530 aa15.68■□□□□ 0.1
UBE3B-210ENST00000539599 MYBL2P10244 700 aa15.68■□□□□ 0.1
UBE3B-210ENST00000539599 DNA2P51530 1060 aa15.68■□□□□ 0.1
UBE3B-210ENST00000539599 HNRNPH2P55795 449 aaKnown RBP15.68■□□□□ 0.1
UBE3B-210ENST00000539599 C2orf54Q08AI8 447 aa15.68■□□□□ 0.1
UBE3B-210ENST00000539599 ENOX2Q16206 610 aaKnown RBP15.68■□□□□ 0.1
UBE3B-210ENST00000539599 MSANTD4Q8NCY6 345 aa15.68■□□□□ 0.1
UBE3B-210ENST00000539599 RIN2Q8WYP3 895 aaPredicted RBP15.68■□□□□ 0.1
UBE3B-210ENST00000539599 CALML4Q96GE6 196 aa15.68■□□□□ 0.1
UBE3B-210ENST00000539599 DHTKD1Q96HY7 919 aaPredicted RBP15.68■□□□□ 0.1
UBE3B-210ENST00000539599 MTMR9Q96QG7 549 aa15.68■□□□□ 0.1
UBE3B-210ENST00000539599 USP17L15C9J2P7 530 aa15.68■□□□□ 0.1
UBE3B-210ENST00000539599 USP17L13C9JLJ4 530 aa15.68■□□□□ 0.1
UBE3B-210ENST00000539599 USP17L11C9JVI0 530 aa15.68■□□□□ 0.1
UBE3B-210ENST00000539599 USP17L18D6R9N7 530 aa15.68■□□□□ 0.1
UBE3B-210ENST00000539599 USP17L22D6RA61 530 aa15.68■□□□□ 0.1
UBE3B-210ENST00000539599 USP17L17D6RBQ6 530 aa15.68■□□□□ 0.1
UBE3B-210ENST00000539599 USP17L19D6RCP7 530 aa15.68■□□□□ 0.1
UBE3B-210ENST00000539599 USP17L20D6RJB6 530 aa15.68■□□□□ 0.1
UBE3B-210ENST00000539599 MAP2K7O14733 419 aa15.68■□□□□ 0.1
UBE3B-210ENST00000539599 IL1R1P14778 569 aa15.68■□□□□ 0.1
UBE3B-210ENST00000539599 USP17L24Q0WX57 530 aa15.68■□□□□ 0.1
UBE3B-210ENST00000539599 EZH2Q15910 746 aaKnown RBP15.68■□□□□ 0.1
UBE3B-210ENST00000539599 USP17L6PQ6QN14 398 aa15.68■□□□□ 0.1
UBE3B-210ENST00000539599 SV2BQ7L1I2 683 aa15.68■□□□□ 0.1
UBE3B-210ENST00000539599 NELFCDQ8IXH7 590 aa15.68■□□□□ 0.1
UBE3B-210ENST00000539599 ADGRF4Q8IZF3 695 aa15.68■□□□□ 0.1
UBE3B-210ENST00000539599 LARP4BQ92615 738 aaKnown RBP15.68■□□□□ 0.1
UBE3B-210ENST00000539599 CDK5RAP3Q96JB5 506 aa15.68■□□□□ 0.1
UBE3B-210ENST00000539599 JMJD4Q9H9V9 463 aa15.68■□□□□ 0.1
UBE3B-210ENST00000539599 ARHGAP20Q9P2F6 1191 aa15.68■□□□□ 0.1
UBE3B-210ENST00000539599 L1RE1Q9UN81 338 aa15.68■□□□□ 0.1
UBE3B-210ENST00000539599 ADAMTSL1Q8N6G6 1762 aa15.68■□□□□ 0.1
UBE3B-210ENST00000539599 ADCY7P51828 1080 aa15.67■□□□□ 0.1
UBE3B-210ENST00000539599 TCP10Q12799 353 aa15.67■□□□□ 0.1
UBE3B-210ENST00000539599 CCDC96Q2M329 555 aa15.67■□□□□ 0.1
UBE3B-210ENST00000539599 GALNT17Q6IS24 598 aa15.67■□□□□ 0.1
UBE3B-210ENST00000539599 SLC30A10Q6XR72 485 aa15.67■□□□□ 0.1
UBE3B-210ENST00000539599 DDX12PQ92771 950 aa15.67■□□□□ 0.1
UBE3B-210ENST00000539599 CRACR2AQ9BSW2 395 aa15.67■□□□□ 0.1
UBE3B-210ENST00000539599 BCAS3Q9H6U6 928 aa15.67■□□□□ 0.1
UBE3B-210ENST00000539599 FAN1Q9Y2M0 1017 aa15.67■□□□□ 0.1
UBE3B-210ENST00000539599 NCK2O43639 380 aa15.67■□□□□ 0.1
UBE3B-210ENST00000539599 STAT3P40763 770 aa15.67■□□□□ 0.1
UBE3B-210ENST00000539599 MATR3P43243 847 aaKnown RBP eCLIP15.67■□□□□ 0.1
UBE3B-210ENST00000539599 LMAN1P49257 510 aa15.67■□□□□ 0.1
UBE3B-210ENST00000539599 BRD3Q15059 726 aa15.67■□□□□ 0.1
UBE3B-210ENST00000539599 DNAAF5Q86Y56 855 aa15.67■□□□□ 0.1
UBE3B-210ENST00000539599 RIOX1Q9H6W3 641 aa15.67■□□□□ 0.1
UBE3B-210ENST00000539599 NLRC4Q9NPP4 1024 aa15.67■□□□□ 0.1
UBE3B-210ENST00000539599 JADE2Q9NQC1 790 aa15.67■□□□□ 0.1
UBE3B-210ENST00000539599 SALL4Q9UJQ4 1053 aa15.67■□□□□ 0.1
UBE3B-210ENST00000539599 RAB21Q9UL25 225 aa15.67■□□□□ 0.1
UBE3B-210ENST00000539599 LTBP4Q8N2S1 1624 aa15.66■□□□□ 0.1
UBE3B-210ENST00000539599 E9PMD0 336 aa15.66■□□□□ 0.1
UBE3B-210ENST00000539599 UBAP1LF5GYI3 381 aa15.66■□□□□ 0.1
UBE3B-210ENST00000539599 LAD1O00515 517 aa15.66■□□□□ 0.1
UBE3B-210ENST00000539599 MOCS3O95396 460 aa15.66■□□□□ 0.1
UBE3B-210ENST00000539599 CASP8Q14790 479 aa15.66■□□□□ 0.1
UBE3B-210ENST00000539599 MEA1Q16626 185 aa15.66■□□□□ 0.1
UBE3B-210ENST00000539599 TANGO6Q9C0B7 1094 aa15.66■□□□□ 0.1
UBE3B-210ENST00000539599 ADAM21Q9UKJ8 722 aa15.66■□□□□ 0.1
UBE3B-210ENST00000539599 SAR1BQ9Y6B6 198 aa15.66■□□□□ 0.1
UBE3B-210ENST00000539599 WHAMMP3Q1A5X7 153 aa15.66■□□□□ 0.1
UBE3B-210ENST00000539599 RRAGAQ7L523 313 aa15.66■□□□□ 0.1
UBE3B-210ENST00000539599 HAS1Q92839 578 aa15.66■□□□□ 0.1
UBE3B-210ENST00000539599 CCDC102AQ96A19 550 aa15.66■□□□□ 0.1
UBE3B-210ENST00000539599 AK8Q96MA6 479 aa15.66■□□□□ 0.1
UBE3B-210ENST00000539599 LZTS2Q9BRK4 669 aa15.66■□□□□ 0.1
UBE3B-210ENST00000539599 HAUS4Q9H6D7 363 aa15.66■□□□□ 0.1
UBE3B-210ENST00000539599 ZNF219Q9P2Y4 722 aaPredicted RBP15.66■□□□□ 0.1
UBE3B-210ENST00000539599 MYH10P35580 1976 aa15.66■□□□□ 0.1
UBE3B-210ENST00000539599 LRRC53A6NM62 1247 aa15.65■□□□□ 0.1
UBE3B-210ENST00000539599 PSMD14O00487 310 aa15.65■□□□□ 0.1
UBE3B-210ENST00000539599 ATP2B4P23634 1241 aa15.65■□□□□ 0.1
UBE3B-210ENST00000539599 CAGE1Q8TC20 777 aa15.65■□□□□ 0.1
UBE3B-210ENST00000539599 COG1Q8WTW3 980 aa15.65■□□□□ 0.1
UBE3B-210ENST00000539599 HDAC7Q8WUI4 952 aa15.65■□□□□ 0.1
UBE3B-210ENST00000539599 NDST4Q9H3R1 872 aa15.65■□□□□ 0.1
UBE3B-210ENST00000539599 ZNF287Q9HBT7 754 aa15.65■□□□□ 0.1
UBE3B-210ENST00000539599 TAF1LQ8IZX4 1826 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms