RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 PSMD2Q13200 908 aa7.08□□□□□ -1.28
LSAMP-207ENST00000539563 TMED8Q6PL24 325 aaPredicted RBP7.08□□□□□ -1.28
LSAMP-207ENST00000539563 RSPH3Q86UC2 560 aa7.08□□□□□ -1.28
LSAMP-207ENST00000539563 CEP120Q8N960 986 aa7.08□□□□□ -1.28
LSAMP-207ENST00000539563 POLR3EQ9NVU0 708 aa7.08□□□□□ -1.28
LSAMP-207ENST00000539563 FANCLQ9NW38 375 aa7.08□□□□□ -1.28
LSAMP-207ENST00000539563 NCAPD2Q15021 1401 aa7.08□□□□□ -1.28
LSAMP-207ENST00000539563 MAGI3Q5TCQ9 1506 aa7.08□□□□□ -1.28
LSAMP-207ENST00000539563 CTAGE3PQ8IX95 158 aa7.08□□□□□ -1.28
LSAMP-207ENST00000539563 TRMT2AQ8IZ69 625 aaKnown RBP7.08□□□□□ -1.28
LSAMP-207ENST00000539563 FNBP4Q8N3X1 1017 aaPredicted RBP7.08□□□□□ -1.28
LSAMP-207ENST00000539563 NACC1Q96RE7 527 aa7.08□□□□□ -1.28
LSAMP-207ENST00000539563 MED4Q9NPJ6 270 aa7.08□□□□□ -1.28
LSAMP-207ENST00000539563 KIAA1024Q9UPX6 916 aa7.08□□□□□ -1.28
LSAMP-207ENST00000539563 NOC2LQ9Y3T9 749 aaKnown RBP7.08□□□□□ -1.28
LSAMP-207ENST00000539563 MED7O43513 233 aa7.08□□□□□ -1.28
LSAMP-207ENST00000539563 STAT2P52630 851 aa7.08□□□□□ -1.28
LSAMP-207ENST00000539563 BFSP1Q12934 665 aa7.08□□□□□ -1.28
LSAMP-207ENST00000539563 SLC39A14Q15043 492 aa7.08□□□□□ -1.28
LSAMP-207ENST00000539563 MAP7D3Q8IWC1 876 aa7.08□□□□□ -1.28
LSAMP-207ENST00000539563 PPM1KQ8N3J5 372 aa7.08□□□□□ -1.28
LSAMP-207ENST00000539563 DHX36Q9H2U1 1008 aaKnown RBP7.08□□□□□ -1.28
LSAMP-207ENST00000539563 BCS1LQ9Y276 419 aa7.08□□□□□ -1.28
LSAMP-207ENST00000539563 THRAP3Q9Y2W1 955 aaKnown RBP7.08□□□□□ -1.28
LSAMP-207ENST00000539563 DLATP10515 647 aaKnown RBP7.07□□□□□ -1.28
LSAMP-207ENST00000539563 SURF1Q15526 300 aa7.07□□□□□ -1.28
LSAMP-207ENST00000539563 TRIM56Q9BRZ2 755 aaKnown RBP7.07□□□□□ -1.28
LSAMP-207ENST00000539563 TUBGCP2Q9BSJ2 902 aa7.07□□□□□ -1.28
LSAMP-207ENST00000539563 KLHL14Q9P2G3 628 aa7.07□□□□□ -1.28
LSAMP-207ENST00000539563 NPHP4O75161 1426 aaPredicted RBP7.07□□□□□ -1.28
LSAMP-207ENST00000539563 ZNF500O60304 480 aaPredicted RBP7.07□□□□□ -1.28
LSAMP-207ENST00000539563 AFPP02771 609 aaKnown RBP7.07□□□□□ -1.28
LSAMP-207ENST00000539563 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.07□□□□□ -1.28
LSAMP-207ENST00000539563 LARP4BQ92615 738 aaKnown RBP7.07□□□□□ -1.28
LSAMP-207ENST00000539563 GPKOWQ92917 476 aaPredicted RBP eCLIP7.07□□□□□ -1.28
LSAMP-207ENST00000539563 ZBTB9Q96C00 473 aa7.07□□□□□ -1.28
LSAMP-207ENST00000539563 NT5C1BQ96P26 610 aa7.07□□□□□ -1.28
LSAMP-207ENST00000539563 HAUS8Q9BT25 410 aa7.07□□□□□ -1.28
LSAMP-207ENST00000539563 HEG1Q9ULI3 1381 aa7.07□□□□□ -1.28
LSAMP-207ENST00000539563 IGSF1Q8N6C5 1336 aa7.07□□□□□ -1.28
LSAMP-207ENST00000539563 KRT3P12035 628 aa7.07□□□□□ -1.28
LSAMP-207ENST00000539563 LTKP29376 864 aa7.07□□□□□ -1.28
LSAMP-207ENST00000539563 ADORA1P30542 326 aa7.07□□□□□ -1.28
LSAMP-207ENST00000539563 FAM196AQ6ZSG2 479 aa7.07□□□□□ -1.28
LSAMP-207ENST00000539563 METTL23Q86XA0 190 aa7.07□□□□□ -1.28
LSAMP-207ENST00000539563 MGARPQ8TDB4 240 aa7.07□□□□□ -1.28
LSAMP-207ENST00000539563 SCYL1Q96KG9 808 aa7.07□□□□□ -1.28
LSAMP-207ENST00000539563 ERVK-7P63135 1459 aa7.07□□□□□ -1.28
LSAMP-207ENST00000539563 M0R2C6 588 aa7.07□□□□□ -1.28
LSAMP-207ENST00000539563 ARHGAP27Q6ZUM4 889 aa7.07□□□□□ -1.28
LSAMP-207ENST00000539563 CLIC6Q96NY7 704 aa7.07□□□□□ -1.28
LSAMP-207ENST00000539563 ANO3Q9BYT9 981 aa7.07□□□□□ -1.28
LSAMP-207ENST00000539563 CEP152O94986 1710 aa7.07□□□□□ -1.28
LSAMP-207ENST00000539563 TMEM232C9JQI7 657 aa7.07□□□□□ -1.28
LSAMP-207ENST00000539563 IKBKBO14920 756 aa7.07□□□□□ -1.28
LSAMP-207ENST00000539563 BUB1O43683 1085 aa7.07□□□□□ -1.28
LSAMP-207ENST00000539563 SRGAP2BP0DMP2 458 aa7.07□□□□□ -1.28
LSAMP-207ENST00000539563 GUCY2FP51841 1108 aa7.07□□□□□ -1.28
LSAMP-207ENST00000539563 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.07□□□□□ -1.28
LSAMP-207ENST00000539563 CCDC68Q9H2F9 335 aa7.07□□□□□ -1.28
LSAMP-207ENST00000539563 RFX1P22670 979 aa7.07□□□□□ -1.28
LSAMP-207ENST00000539563 MAN2A1Q16706 1144 aa7.07□□□□□ -1.28
LSAMP-207ENST00000539563 ODR4Q5SWX8 454 aa7.07□□□□□ -1.28
LSAMP-207ENST00000539563 ARHGEF25Q86VW2 580 aa7.07□□□□□ -1.28
LSAMP-207ENST00000539563 AP5M1Q9H0R1 490 aa7.07□□□□□ -1.28
LSAMP-207ENST00000539563 KANSL2Q9H9L4 492 aa7.07□□□□□ -1.28
LSAMP-207ENST00000539563 ANAPC5Q9UJX4 755 aa7.07□□□□□ -1.28
LSAMP-207ENST00000539563 ETF1P62495 437 aaKnown RBP7.07□□□□□ -1.28
LSAMP-207ENST00000539563 ALCAMQ13740 583 aa7.07□□□□□ -1.28
LSAMP-207ENST00000539563 BBS5Q8N3I7 341 aa7.07□□□□□ -1.28
LSAMP-207ENST00000539563 FAM71BQ8TC56 605 aa7.07□□□□□ -1.28
LSAMP-207ENST00000539563 CCHCR1Q8TD31 782 aa7.07□□□□□ -1.28
LSAMP-207ENST00000539563 PI4KBQ9UBF8 816 aa7.07□□□□□ -1.28
LSAMP-207ENST00000539563 ADGRL3Q9HAR2 1447 aa7.07□□□□□ -1.28
LSAMP-207ENST00000539563 IFNB1P01574 187 aa7.06□□□□□ -1.28
LSAMP-207ENST00000539563 KAZNQ674X7 775 aa7.06□□□□□ -1.28
LSAMP-207ENST00000539563 MIPOL1Q8TD10 442 aa7.06□□□□□ -1.28
LSAMP-207ENST00000539563 PBKQ96KB5 322 aa7.06□□□□□ -1.28
LSAMP-207ENST00000539563 NCAPGQ9BPX3 1015 aa7.06□□□□□ -1.28
LSAMP-207ENST00000539563 KMT5AQ9NQR1 393 aa7.06□□□□□ -1.28
LSAMP-207ENST00000539563 DISC1Q9NRI5 854 aa7.06□□□□□ -1.28
LSAMP-207ENST00000539563 ANKFY1Q9P2R3 1169 aa7.06□□□□□ -1.28
LSAMP-207ENST00000539563 FAN1Q9Y2M0 1017 aa7.06□□□□□ -1.28
LSAMP-207ENST00000539563 SPATA31E1Q6ZUB1 1445 aa7.06□□□□□ -1.28
LSAMP-207ENST00000539563 MYO1FO00160 1098 aa7.06□□□□□ -1.28
LSAMP-207ENST00000539563 NSFP46459 744 aaKnown RBP7.06□□□□□ -1.28
LSAMP-207ENST00000539563 ITKQ08881 620 aa7.06□□□□□ -1.28
LSAMP-207ENST00000539563 PSMD6Q15008 389 aa7.06□□□□□ -1.28
LSAMP-207ENST00000539563 USPL1Q5W0Q7 1092 aa7.06□□□□□ -1.28
LSAMP-207ENST00000539563 TRIM42Q8IWZ5 723 aa7.06□□□□□ -1.28
LSAMP-207ENST00000539563 P2RX5Q93086 422 aa7.06□□□□□ -1.28
LSAMP-207ENST00000539563 MRPL47Q9HD33 250 aaKnown RBP7.06□□□□□ -1.28
LSAMP-207ENST00000539563 WDR70Q9NW82 654 aa7.06□□□□□ -1.28
LSAMP-207ENST00000539563 KDM6BO15054 1643 aa7.06□□□□□ -1.28
LSAMP-207ENST00000539563 POLR1AO95602 1720 aaPredicted RBP7.06□□□□□ -1.28
LSAMP-207ENST00000539563 GOLGA8HP0CJ92 632 aa7.06□□□□□ -1.28
LSAMP-207ENST00000539563 BMP3P12645 472 aa7.06□□□□□ -1.28
LSAMP-207ENST00000539563 FKBP3Q00688 224 aaKnown RBP7.06□□□□□ -1.28
LSAMP-207ENST00000539563 ARMC9Q7Z3E5 817 aa7.06□□□□□ -1.28
LSAMP-207ENST00000539563 FAM160B2Q86V87 743 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms