RNA–Protein interactions for RNA: ENST00000539041.5

SMPDL3A-203, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2 BASIC

Gene SMPDL3A, Length 1,755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-203ENST00000539041 MBOAT7Q96N66 472 aa23.14■■□□□ 1.29
SMPDL3A-203ENST00000539041 H7C1D1 291 aa23.13■■□□□ 1.29
SMPDL3A-203ENST00000539041 WNT10BO00744 389 aa23.13■■□□□ 1.29
SMPDL3A-203ENST00000539041 FOSP01100 380 aaPredicted RBP23.13■■□□□ 1.29
SMPDL3A-203ENST00000539041 TMEM119Q4V9L6 283 aa23.13■■□□□ 1.29
SMPDL3A-203ENST00000539041 CDAN1Q8IWY9 1227 aa23.13■■□□□ 1.29
SMPDL3A-203ENST00000539041 ANKRD20A12PQ8NF67 263 aa23.13■■□□□ 1.29
SMPDL3A-203ENST00000539041 LARP4BQ92615 738 aaKnown RBP23.13■■□□□ 1.29
SMPDL3A-203ENST00000539041 MYOZ2Q9NPC6 264 aa23.13■■□□□ 1.29
SMPDL3A-203ENST00000539041 PGAP2Q9UHJ9 254 aa23.13■■□□□ 1.29
SMPDL3A-203ENST00000539041 PSMA7O14818 248 aa23.12■■□□□ 1.29
SMPDL3A-203ENST00000539041 TEX33O43247 280 aa23.12■■□□□ 1.29
SMPDL3A-203ENST00000539041 PBX1P40424 430 aa23.12■■□□□ 1.29
SMPDL3A-203ENST00000539041 PPP1R2P41236 205 aa23.12■■□□□ 1.29
SMPDL3A-203ENST00000539041 TRAF1Q13077 416 aa23.12■■□□□ 1.29
SMPDL3A-203ENST00000539041 TNIP1Q15025 636 aa23.12■■□□□ 1.29
SMPDL3A-203ENST00000539041 NBPF9Q3BBW0 867 aa23.12■■□□□ 1.29
SMPDL3A-203ENST00000539041 KIAA1755Q5JYT7 1200 aa23.12■■□□□ 1.29
SMPDL3A-203ENST00000539041 E4F1Q66K89 784 aaPredicted RBP23.12■■□□□ 1.29
SMPDL3A-203ENST00000539041 RAD54LQ92698 747 aa23.12■■□□□ 1.29
SMPDL3A-203ENST00000539041 DHTKD1Q96HY7 919 aaPredicted RBP23.12■■□□□ 1.29
SMPDL3A-203ENST00000539041 SH2D4AQ9H788 454 aa23.12■■□□□ 1.29
SMPDL3A-203ENST00000539041 PCDHA12Q9UN75 941 aa23.12■■□□□ 1.29
SMPDL3A-203ENST00000539041 CAP2P40123 477 aa23.12■■□□□ 1.29
SMPDL3A-203ENST00000539041 GOLGA8FQ08AF8 430 aa23.12■■□□□ 1.29
SMPDL3A-203ENST00000539041 GOLGA8DPQ0D2H9 430 aa23.12■■□□□ 1.29
SMPDL3A-203ENST00000539041 MCM6Q14566 821 aa23.12■■□□□ 1.29
SMPDL3A-203ENST00000539041 KRT31Q15323 416 aa23.12■■□□□ 1.29
SMPDL3A-203ENST00000539041 FAM83BQ5T0W9 1011 aa23.12■■□□□ 1.29
SMPDL3A-203ENST00000539041 NYAP1Q6ZVC0 841 aa23.12■■□□□ 1.29
SMPDL3A-203ENST00000539041 CRYGNQ8WXF5 182 aa23.12■■□□□ 1.29
SMPDL3A-203ENST00000539041 NUDT12Q9BQG2 462 aa23.12■■□□□ 1.29
SMPDL3A-203ENST00000539041 VCPKMTQ9H867 229 aa23.12■■□□□ 1.29
SMPDL3A-203ENST00000539041 KCNMB3Q9NPA1 279 aa23.12■■□□□ 1.29
SMPDL3A-203ENST00000539041 TRMT1Q9NXH9 659 aaKnown RBP23.12■■□□□ 1.29
SMPDL3A-203ENST00000539041 KCNJ18B7U540 433 aa23.11■■□□□ 1.29
SMPDL3A-203ENST00000539041 ARHGAP4P98171 946 aa23.11■■□□□ 1.29
SMPDL3A-203ENST00000539041 MAP3K10Q02779 954 aa23.11■■□□□ 1.29
SMPDL3A-203ENST00000539041 KCNJ12Q14500 433 aa23.11■■□□□ 1.29
SMPDL3A-203ENST00000539041 PTPN14Q15678 1187 aa23.11■■□□□ 1.29
SMPDL3A-203ENST00000539041 MIGA2Q7L4E1 593 aa23.11■■□□□ 1.29
SMPDL3A-203ENST00000539041 LRRC27Q9C0I9 530 aa23.11■■□□□ 1.29
SMPDL3A-203ENST00000539041 KDM3AQ9Y4C1 1321 aa23.11■■□□□ 1.29
SMPDL3A-203ENST00000539041 TRIM49BA6NDI0 452 aa23.1■■□□□ 1.29
SMPDL3A-203ENST00000539041 LRRC10BA6NIK2 292 aa23.1■■□□□ 1.29
SMPDL3A-203ENST00000539041 SPDYE3A6NKU9 549 aa23.1■■□□□ 1.29
SMPDL3A-203ENST00000539041 NFKBIEO00221 500 aa23.1■■□□□ 1.29
SMPDL3A-203ENST00000539041 SLC26A4O43511 780 aa23.1■■□□□ 1.29
SMPDL3A-203ENST00000539041 COPB1P53618 953 aaKnown RBP23.1■■□□□ 1.29
SMPDL3A-203ENST00000539041 TCP11X2Q5H9J9 407 aa23.1■■□□□ 1.29
SMPDL3A-203ENST00000539041 CNNM4Q6P4Q7 775 aa23.1■■□□□ 1.29
SMPDL3A-203ENST00000539041 TC2NQ8N9U0 490 aa23.1■■□□□ 1.29
SMPDL3A-203ENST00000539041 CHURC1Q8WUH1 139 aa23.1■■□□□ 1.29
SMPDL3A-203ENST00000539041 P2RX7Q99572 595 aaKnown RBP23.1■■□□□ 1.29
SMPDL3A-203ENST00000539041 MYMKA6NI61 221 aa23.09■■□□□ 1.29
SMPDL3A-203ENST00000539041 CCP110O43303 1012 aa23.09■■□□□ 1.29
SMPDL3A-203ENST00000539041 SREBF1P36956 1147 aa23.09■■□□□ 1.29
SMPDL3A-203ENST00000539041 COBLL1Q53SF7 1204 aa23.09■■□□□ 1.29
SMPDL3A-203ENST00000539041 HYIQ5T013 277 aa23.09■■□□□ 1.29
SMPDL3A-203ENST00000539041 UNC13DQ70J99 1090 aa23.09■■□□□ 1.29
SMPDL3A-203ENST00000539041 TMEM139Q8IV31 216 aa23.09■■□□□ 1.29
SMPDL3A-203ENST00000539041 TEX2Q8IWB9 1127 aa23.09■■□□□ 1.29
SMPDL3A-203ENST00000539041 SLFN12Q8IYM2 578 aa23.09■■□□□ 1.29
SMPDL3A-203ENST00000539041 RBBP6Q7Z6E9 1792 aaKnown RBP23.09■■□□□ 1.29
SMPDL3A-203ENST00000539041 PVALEFA0A1B0GWK0 134 aa23.09■■□□□ 1.29
SMPDL3A-203ENST00000539041 SHTN1A0MZ66 631 aa23.09■■□□□ 1.29
SMPDL3A-203ENST00000539041 OPLAHO14841 1288 aa23.09■■□□□ 1.29
SMPDL3A-203ENST00000539041 PLA2G6O60733 806 aa23.09■■□□□ 1.29
SMPDL3A-203ENST00000539041 RPS12P25398 132 aaKnown RBP23.09■■□□□ 1.29
SMPDL3A-203ENST00000539041 ZNF280AP59817 542 aaPredicted RBP23.09■■□□□ 1.29
SMPDL3A-203ENST00000539041 CEP135Q66GS9 1140 aa23.09■■□□□ 1.29
SMPDL3A-203ENST00000539041 FCHSD1Q86WN1 690 aa23.09■■□□□ 1.29
SMPDL3A-203ENST00000539041 NOC3LQ8WTT2 800 aaKnown RBP23.09■■□□□ 1.29
SMPDL3A-203ENST00000539041 TRIM47Q96LD4 638 aa23.09■■□□□ 1.29
SMPDL3A-203ENST00000539041 NT5C3AQ9H0P0 336 aa23.09■■□□□ 1.29
SMPDL3A-203ENST00000539041 THAP9Q9H5L6 903 aa23.09■■□□□ 1.29
SMPDL3A-203ENST00000539041 ITIH6Q6UXX5 1313 aa23.09■■□□□ 1.29
SMPDL3A-203ENST00000539041 DOCK1Q14185 1865 aa23.08■■□□□ 1.29
SMPDL3A-203ENST00000539041 BICDL2A1A5D9 508 aa23.08■■□□□ 1.29
SMPDL3A-203ENST00000539041 KIF2AO00139 706 aaPredicted RBP23.08■■□□□ 1.29
SMPDL3A-203ENST00000539041 N4BP3O15049 544 aa23.08■■□□□ 1.29
SMPDL3A-203ENST00000539041 TAL1P17542 331 aaPredicted RBP23.08■■□□□ 1.29
SMPDL3A-203ENST00000539041 CCNE1P24864 410 aa23.08■■□□□ 1.29
SMPDL3A-203ENST00000539041 CCT6AP40227 531 aaKnown RBP23.08■■□□□ 1.29
SMPDL3A-203ENST00000539041 PMS1P54277 932 aaKnown RBP23.08■■□□□ 1.29
SMPDL3A-203ENST00000539041 Q4G0T1 1027 aa23.08■■□□□ 1.29
SMPDL3A-203ENST00000539041 FAM160B2Q86V87 743 aa23.08■■□□□ 1.29
SMPDL3A-203ENST00000539041 GJA10Q969M2 543 aa23.08■■□□□ 1.29
SMPDL3A-203ENST00000539041 PPP1R13BQ96KQ4 1090 aa23.08■■□□□ 1.29
SMPDL3A-203ENST00000539041 RANBP17Q9H2T7 1088 aaKnown RBP23.08■■□□□ 1.29
SMPDL3A-203ENST00000539041 PIK3CDO00329 1044 aa23.07■■□□□ 1.28
SMPDL3A-203ENST00000539041 DYNC1I1O14576 645 aa23.07■■□□□ 1.28
SMPDL3A-203ENST00000539041 TBX3O15119 743 aa23.07■■□□□ 1.28
SMPDL3A-203ENST00000539041 ARHGAP6O43182 974 aa23.07■■□□□ 1.28
SMPDL3A-203ENST00000539041 ASNSP08243 561 aa23.07■■□□□ 1.28
SMPDL3A-203ENST00000539041 HOXA7P31268 230 aaPredicted RBP23.07■■□□□ 1.28
SMPDL3A-203ENST00000539041 STK4Q13043 487 aa23.07■■□□□ 1.28
SMPDL3A-203ENST00000539041 TTI2Q6NXR4 508 aa23.07■■□□□ 1.28
SMPDL3A-203ENST00000539041 KCNK18Q7Z418 384 aa23.07■■□□□ 1.28
SMPDL3A-203ENST00000539041 PPFIBP1Q86W92 1011 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms