RNA–Protein interactions for RNA: ENST00000538979.5

SCNN1A-212, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 5

Gene SCNN1A, Length 771 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-212ENST00000538979 HAND2P61296 217 aa17.25■□□□□ 0.35
SCNN1A-212ENST00000538979 NMIQ13287 307 aaPredicted RBP17.25■□□□□ 0.35
SCNN1A-212ENST00000538979 AAK1Q2M2I8 961 aa17.25■□□□□ 0.35
SCNN1A-212ENST00000538979 MCF2L2Q86YR7 1114 aa17.25■□□□□ 0.35
SCNN1A-212ENST00000538979 WNT8AQ9H1J5 351 aa17.25■□□□□ 0.35
SCNN1A-212ENST00000538979 GTPBP6O43824 516 aaPredicted RBP17.24■□□□□ 0.35
SCNN1A-212ENST00000538979 DHX16O60231 1041 aaKnown RBP17.24■□□□□ 0.35
SCNN1A-212ENST00000538979 SNHG28P0DPA3 235 aa17.24■□□□□ 0.35
SCNN1A-212ENST00000538979 MRPS5P82675 430 aaKnown RBP17.24■□□□□ 0.35
SCNN1A-212ENST00000538979 USH1GQ495M9 461 aa17.24■□□□□ 0.35
SCNN1A-212ENST00000538979 TMEM67Q5HYA8 995 aa17.24■□□□□ 0.35
SCNN1A-212ENST00000538979 RGS22Q8NE09 1264 aa17.24■□□□□ 0.35
SCNN1A-212ENST00000538979 SCLYQ96I15 445 aa17.24■□□□□ 0.35
SCNN1A-212ENST00000538979 PURBQ96QR8 312 aaKnown RBP17.24■□□□□ 0.35
SCNN1A-212ENST00000538979 RWDD1Q9H446 243 aaPredicted RBP17.24■□□□□ 0.35
SCNN1A-212ENST00000538979 DIAPH3Q9NSV4 1193 aa17.24■□□□□ 0.35
SCNN1A-212ENST00000538979 TRMT13Q9NUP7 481 aaKnown RBP17.24■□□□□ 0.35
SCNN1A-212ENST00000538979 A6NJR5 290 aa17.23■□□□□ 0.35
SCNN1A-212ENST00000538979 EDNRBP24530 442 aa17.23■□□□□ 0.35
SCNN1A-212ENST00000538979 ASPRV1Q53RT3 343 aa17.23■□□□□ 0.35
SCNN1A-212ENST00000538979 USP38Q8NB14 1042 aa17.23■□□□□ 0.35
SCNN1A-212ENST00000538979 PNMA1Q8ND90 353 aa17.23■□□□□ 0.35
SCNN1A-212ENST00000538979 NSUN6Q8TEA1 469 aaKnown RBP17.23■□□□□ 0.35
SCNN1A-212ENST00000538979 CRBNQ96SW2 442 aa17.23■□□□□ 0.35
SCNN1A-212ENST00000538979 DDX49Q9Y6V7 483 aaKnown RBP17.23■□□□□ 0.35
SCNN1A-212ENST00000538979 MYH7BA7E2Y1 1941 aa17.23■□□□□ 0.35
SCNN1A-212ENST00000538979 TRIP12Q14669 1992 aaPredicted RBP17.22■□□□□ 0.35
SCNN1A-212ENST00000538979 BAIAP3O94812 1187 aa17.22■□□□□ 0.35
SCNN1A-212ENST00000538979 PARNO95453 639 aaKnown RBP17.22■□□□□ 0.35
SCNN1A-212ENST00000538979 CYP2C9P11712 490 aa17.22■□□□□ 0.35
SCNN1A-212ENST00000538979 KCNJ6P48051 423 aa17.22■□□□□ 0.35
SCNN1A-212ENST00000538979 IMMTQ16891 758 aaKnown RBP17.22■□□□□ 0.35
SCNN1A-212ENST00000538979 NBPF20Q3BBV1 942 aa17.22■□□□□ 0.35
SCNN1A-212ENST00000538979 DEFB128Q7Z7B8 93 aa17.22■□□□□ 0.35
SCNN1A-212ENST00000538979 ZNF589Q86UQ0 364 aaPredicted RBP17.22■□□□□ 0.35
SCNN1A-212ENST00000538979 CAGE1Q8TC20 777 aa17.22■□□□□ 0.35
SCNN1A-212ENST00000538979 PHOSPHO2Q8TCD6 241 aa17.22■□□□□ 0.35
SCNN1A-212ENST00000538979 CLEC4DQ8WXI8 215 aa17.22■□□□□ 0.35
SCNN1A-212ENST00000538979 ASB2Q96Q27 587 aa17.22■□□□□ 0.35
SCNN1A-212ENST00000538979 KATNAL1Q9BW62 490 aa17.22■□□□□ 0.35
SCNN1A-212ENST00000538979 FTOQ9C0B1 505 aaKnown RBP eCLIP17.22■□□□□ 0.35
SCNN1A-212ENST00000538979 LNPKQ9C0E8 428 aa17.22■□□□□ 0.35
SCNN1A-212ENST00000538979 CNNM2Q9H8M5 875 aa17.22■□□□□ 0.35
SCNN1A-212ENST00000538979 CTNNA3Q9UI47 895 aa17.22■□□□□ 0.35
SCNN1A-212ENST00000538979 GH1P01241 217 aa17.21■□□□□ 0.35
SCNN1A-212ENST00000538979 CHMP4BP1P59074 171 aa17.21■□□□□ 0.35
SCNN1A-212ENST00000538979 TRAF1Q13077 416 aa17.21■□□□□ 0.35
SCNN1A-212ENST00000538979 STXBP2Q15833 593 aa17.21■□□□□ 0.35
SCNN1A-212ENST00000538979 CCDC85BQ15834 202 aaPredicted RBP17.21■□□□□ 0.35
SCNN1A-212ENST00000538979 CDC37Q16543 378 aaPredicted RBP17.21■□□□□ 0.35
SCNN1A-212ENST00000538979 IWS1Q96ST2 819 aa17.21■□□□□ 0.35
SCNN1A-212ENST00000538979 UBAC1Q9BSL1 405 aa17.21■□□□□ 0.35
SCNN1A-212ENST00000538979 KRT23Q9C075 422 aa17.21■□□□□ 0.35
SCNN1A-212ENST00000538979 MRPL11Q9Y3B7 192 aaKnown RBP17.21■□□□□ 0.35
SCNN1A-212ENST00000538979 PARP1P09874 1014 aaKnown RBP17.2■□□□□ 0.34
SCNN1A-212ENST00000538979 SDSP20132 328 aa17.2■□□□□ 0.34
SCNN1A-212ENST00000538979 CASTP20810 708 aaKnown RBP17.2■□□□□ 0.34
SCNN1A-212ENST00000538979 AFAP1L1Q8TED9 768 aa17.2■□□□□ 0.34
SCNN1A-212ENST00000538979 ZKSCAN3Q9BRR0 538 aa17.2■□□□□ 0.34
SCNN1A-212ENST00000538979 YBX2Q9Y2T7 364 aaKnown RBP17.2■□□□□ 0.34
SCNN1A-212ENST00000538979 NEDD4P46934 1319 aa17.2■□□□□ 0.34
SCNN1A-212ENST00000538979 KDM4AO75164 1064 aa17.19■□□□□ 0.34
SCNN1A-212ENST00000538979 IQCF3P0C7M6 154 aa17.19■□□□□ 0.34
SCNN1A-212ENST00000538979 GOLGA8HP0CJ92 632 aa17.19■□□□□ 0.34
SCNN1A-212ENST00000538979 PTGS1P23219 599 aa17.19■□□□□ 0.34
SCNN1A-212ENST00000538979 RABGGTBP53611 331 aa17.19■□□□□ 0.34
SCNN1A-212ENST00000538979 SKIV2LQ15477 1246 aaKnown RBP17.19■□□□□ 0.34
SCNN1A-212ENST00000538979 PTGISQ16647 500 aa17.19■□□□□ 0.34
SCNN1A-212ENST00000538979 DGKDQ16760 1214 aa17.19■□□□□ 0.34
SCNN1A-212ENST00000538979 TMEM63BQ5T3F8 832 aa17.19■□□□□ 0.34
SCNN1A-212ENST00000538979 ARHGEF16Q5VV41 709 aa17.19■□□□□ 0.34
SCNN1A-212ENST00000538979 CWC27Q6UX04 472 aaKnown RBP17.19■□□□□ 0.34
SCNN1A-212ENST00000538979 TBC1D10CQ8IV04 446 aa17.19■□□□□ 0.34
SCNN1A-212ENST00000538979 MICALL1Q8N3F8 863 aa17.19■□□□□ 0.34
SCNN1A-212ENST00000538979 ZSCAN10Q96SZ4 725 aaPredicted RBP17.19■□□□□ 0.34
SCNN1A-212ENST00000538979 CA3P07451 260 aa17.18■□□□□ 0.34
SCNN1A-212ENST00000538979 KCNV1Q6PIU1 500 aa17.18■□□□□ 0.34
SCNN1A-212ENST00000538979 SEPT14Q6ZU15 432 aa17.18■□□□□ 0.34
SCNN1A-212ENST00000538979 FBXO11Q86XK2 927 aa17.18■□□□□ 0.34
SCNN1A-212ENST00000538979 ADAMTS19Q8TE59 1207 aa17.18■□□□□ 0.34
SCNN1A-212ENST00000538979 RMDN3Q96TC7 470 aa17.18■□□□□ 0.34
SCNN1A-212ENST00000538979 DSCC1Q9BVC3 393 aa17.18■□□□□ 0.34
SCNN1A-212ENST00000538979 MAP3K20Q9NYL2 800 aaKnown RBP17.18■□□□□ 0.34
SCNN1A-212ENST00000538979 COL4A4P53420 1690 aaPredicted RBP17.17■□□□□ 0.34
SCNN1A-212ENST00000538979 EFCAB14O75071 495 aa17.17■□□□□ 0.34
SCNN1A-212ENST00000538979 MMP3P08254 477 aa17.17■□□□□ 0.34
SCNN1A-212ENST00000538979 TRDNQ13061 729 aa17.17■□□□□ 0.34
SCNN1A-212ENST00000538979 ADGRE1Q14246 886 aa17.17■□□□□ 0.34
SCNN1A-212ENST00000538979 B4GALNT3Q6L9W6 998 aa17.17■□□□□ 0.34
SCNN1A-212ENST00000538979 SESTD1Q86VW0 696 aa17.17■□□□□ 0.34
SCNN1A-212ENST00000538979 CHD1LQ86WJ1 897 aa17.17■□□□□ 0.34
SCNN1A-212ENST00000538979 SMC5Q8IY18 1101 aa17.17■□□□□ 0.34
SCNN1A-212ENST00000538979 ADGRF4Q8IZF3 695 aa17.17■□□□□ 0.34
SCNN1A-212ENST00000538979 C7orf31Q8N865 590 aa17.17■□□□□ 0.34
SCNN1A-212ENST00000538979 UHRF1Q96T88 793 aaPredicted RBP17.17■□□□□ 0.34
SCNN1A-212ENST00000538979 AMNQ9BXJ7 453 aa17.17■□□□□ 0.34
SCNN1A-212ENST00000538979 UBA5Q9GZZ9 404 aa17.17■□□□□ 0.34
SCNN1A-212ENST00000538979 OSBPL3Q9H4L5 887 aa17.17■□□□□ 0.34
SCNN1A-212ENST00000538979 MRVI1Q9Y6F6 885 aa17.17■□□□□ 0.34
SCNN1A-212ENST00000538979 EIF3JO75822 258 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms