RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 ABCB4P21439 1286 aa7.51□□□□□ -1.21
SORT1-209ENST00000538502 IL13P35225 146 aa7.51□□□□□ -1.21
SORT1-209ENST00000538502 MYL7Q01449 175 aa7.51□□□□□ -1.21
SORT1-209ENST00000538502 RCN2Q14257 317 aa7.51□□□□□ -1.21
SORT1-209ENST00000538502 TMED2Q15363 201 aa7.51□□□□□ -1.21
SORT1-209ENST00000538502 CENPUQ71F23 418 aa7.51□□□□□ -1.21
SORT1-209ENST00000538502 NEK8Q86SG6 692 aa7.51□□□□□ -1.21
SORT1-209ENST00000538502 JARID2Q92833 1246 aaPredicted RBP7.51□□□□□ -1.21
SORT1-209ENST00000538502 DBNDD2Q9BQY9 259 aa7.51□□□□□ -1.21
SORT1-209ENST00000538502 KLC4Q9NSK0 619 aa7.51□□□□□ -1.21
SORT1-209ENST00000538502 NIP7Q9Y221 180 aaKnown RBP eCLIP7.51□□□□□ -1.21
SORT1-209ENST00000538502 PALM3A6NDB9 673 aaPredicted RBP7.5□□□□□ -1.21
SORT1-209ENST00000538502 E9PMD0 336 aa7.5□□□□□ -1.21
SORT1-209ENST00000538502 ZNF189O75820 626 aaPredicted RBP7.5□□□□□ -1.21
SORT1-209ENST00000538502 GSTA1P08263 222 aa7.5□□□□□ -1.21
SORT1-209ENST00000538502 GSTA2P09210 222 aa7.5□□□□□ -1.21
SORT1-209ENST00000538502 SGO2Q562F6 1265 aa7.5□□□□□ -1.21
SORT1-209ENST00000538502 TPTE2Q6XPS3 522 aa7.5□□□□□ -1.21
SORT1-209ENST00000538502 ANO5Q75V66 913 aa7.5□□□□□ -1.21
SORT1-209ENST00000538502 SYMPKQ92797 1274 aaKnown RBP7.5□□□□□ -1.21
SORT1-209ENST00000538502 MRPL47Q9HD33 250 aaKnown RBP7.5□□□□□ -1.21
SORT1-209ENST00000538502 PPARAQ07869 468 aa7.5□□□□□ -1.21
SORT1-209ENST00000538502 ADAM9Q13443 819 aa7.5□□□□□ -1.21
SORT1-209ENST00000538502 OTUD7BQ6GQQ9 843 aa7.5□□□□□ -1.21
SORT1-209ENST00000538502 ZC3H18Q86VM9 953 aaKnown RBP7.5□□□□□ -1.21
SORT1-209ENST00000538502 PPWD1Q96BP3 646 aaKnown RBP7.5□□□□□ -1.21
SORT1-209ENST00000538502 RBM17Q96I25 401 aaKnown RBP7.5□□□□□ -1.21
SORT1-209ENST00000538502 TRIM55Q9BYV6 548 aa7.5□□□□□ -1.21
SORT1-209ENST00000538502 ZBTB21Q9ULJ3 1066 aa7.5□□□□□ -1.21
SORT1-209ENST00000538502 PLAAQ9Y263 795 aa7.5□□□□□ -1.21
SORT1-209ENST00000538502 CLIC4Q9Y696 253 aa7.5□□□□□ -1.21
SORT1-209ENST00000538502 A2MP01023 1474 aa7.5□□□□□ -1.21
SORT1-209ENST00000538502 GNGT2O14610 69 aa7.5□□□□□ -1.21
SORT1-209ENST00000538502 IFNAR2P48551 515 aa7.5□□□□□ -1.21
SORT1-209ENST00000538502 PPP2R2AP63151 447 aa7.5□□□□□ -1.21
SORT1-209ENST00000538502 PPP2R5DQ14738 602 aa7.5□□□□□ -1.21
SORT1-209ENST00000538502 C11orf57Q6ZUT1 292 aaPredicted RBP7.5□□□□□ -1.21
SORT1-209ENST00000538502 CRLF3Q8IUI8 442 aa7.5□□□□□ -1.21
SORT1-209ENST00000538502 TRMT2AQ8IZ69 625 aaKnown RBP7.5□□□□□ -1.21
SORT1-209ENST00000538502 SPATA5Q8NB90 893 aa7.5□□□□□ -1.21
SORT1-209ENST00000538502 POC1B-GALNT4F8VUJ3 575 aa7.5□□□□□ -1.21
SORT1-209ENST00000538502 ESRRBO95718 433 aa7.5□□□□□ -1.21
SORT1-209ENST00000538502 MMEP08473 750 aa7.5□□□□□ -1.21
SORT1-209ENST00000538502 ATF7P17544 494 aaPredicted RBP7.5□□□□□ -1.21
SORT1-209ENST00000538502 GABPAQ06546 454 aa7.5□□□□□ -1.21
SORT1-209ENST00000538502 SNX1Q13596 522 aa7.5□□□□□ -1.21
SORT1-209ENST00000538502 TTLL12Q14166 644 aaPredicted RBP7.5□□□□□ -1.21
SORT1-209ENST00000538502 KRT26Q7Z3Y9 468 aa7.5□□□□□ -1.21
SORT1-209ENST00000538502 SRLQ86TD4 932 aa7.5□□□□□ -1.21
SORT1-209ENST00000538502 NLRP14Q86W24 1093 aa7.5□□□□□ -1.21
SORT1-209ENST00000538502 MAP4K1Q92918 833 aa7.5□□□□□ -1.21
SORT1-209ENST00000538502 RIOK1Q9BRS2 568 aaKnown RBP7.5□□□□□ -1.21
SORT1-209ENST00000538502 GPCPD1Q9NPB8 672 aa7.5□□□□□ -1.21
SORT1-209ENST00000538502 NOC2LQ9Y3T9 749 aaKnown RBP7.5□□□□□ -1.21
SORT1-209ENST00000538502 MFAP3LO75121 409 aa7.5□□□□□ -1.21
SORT1-209ENST00000538502 SCG2P13521 617 aa7.5□□□□□ -1.21
SORT1-209ENST00000538502 PDIA3P30101 505 aaKnown RBP7.5□□□□□ -1.21
SORT1-209ENST00000538502 YWHAGP61981 247 aaKnown RBP eCLIP7.5□□□□□ -1.21
SORT1-209ENST00000538502 RHOT2Q8IXI1 618 aa7.5□□□□□ -1.21
SORT1-209ENST00000538502 PDLIM2Q96JY6 352 aa7.5□□□□□ -1.21
SORT1-209ENST00000538502 OSBPL9Q96SU4 736 aa7.5□□□□□ -1.21
SORT1-209ENST00000538502 POLR3CQ9BUI4 534 aaPredicted RBP7.5□□□□□ -1.21
SORT1-209ENST00000538502 GPR108Q9NPR9 543 aa7.5□□□□□ -1.21
SORT1-209ENST00000538502 SCHIP1Q9P0W5 487 aaPredicted RBP7.5□□□□□ -1.21
SORT1-209ENST00000538502 VPS54Q9P1Q0 977 aa7.5□□□□□ -1.21
SORT1-209ENST00000538502 SUFUQ9UMX1 484 aa7.5□□□□□ -1.21
SORT1-209ENST00000538502 TRIM33Q9UPN9 1127 aa7.5□□□□□ -1.21
SORT1-209ENST00000538502 SMCO2A6NFE2 343 aa7.49□□□□□ -1.21
SORT1-209ENST00000538502 GYG2O15488 501 aa7.49□□□□□ -1.21
SORT1-209ENST00000538502 TNNC2P02585 160 aa7.49□□□□□ -1.21
SORT1-209ENST00000538502 PSMC2P35998 433 aaKnown RBP7.49□□□□□ -1.21
SORT1-209ENST00000538502 PTK2Q05397 1052 aa7.49□□□□□ -1.21
SORT1-209ENST00000538502 SESTD1Q86VW0 696 aa7.49□□□□□ -1.21
SORT1-209ENST00000538502 TMCO5AQ8N6Q1 288 aa7.49□□□□□ -1.21
SORT1-209ENST00000538502 HOOK2Q96ED9 719 aa7.49□□□□□ -1.21
SORT1-209ENST00000538502 RNF26Q9BY78 433 aaPredicted RBP7.49□□□□□ -1.21
SORT1-209ENST00000538502 PAIP2BQ9ULR5 123 aaKnown RBP7.49□□□□□ -1.21
SORT1-209ENST00000538502 CD2APQ9Y5K6 639 aa7.49□□□□□ -1.21
SORT1-209ENST00000538502 SYNGAP1Q96PV0 1343 aa7.49□□□□□ -1.21
SORT1-209ENST00000538502 UHRF1BP1LA0JNW5 1464 aa7.49□□□□□ -1.21
SORT1-209ENST00000538502 PZPP20742 1482 aa7.49□□□□□ -1.21
SORT1-209ENST00000538502 CPP00450 1065 aa7.49□□□□□ -1.21
SORT1-209ENST00000538502 IFNB1P01574 187 aa7.49□□□□□ -1.21
SORT1-209ENST00000538502 SLFN14P0C7P3 912 aa7.49□□□□□ -1.21
SORT1-209ENST00000538502 ITGA6P23229 1130 aa7.49□□□□□ -1.21
SORT1-209ENST00000538502 ECE1P42892 770 aa7.49□□□□□ -1.21
SORT1-209ENST00000538502 FAM26FQ5R3K3 315 aa7.49□□□□□ -1.21
SORT1-209ENST00000538502 TMED8Q6PL24 325 aaPredicted RBP7.49□□□□□ -1.21
SORT1-209ENST00000538502 PSPC1Q8WXF1 523 aaKnown RBP7.49□□□□□ -1.21
SORT1-209ENST00000538502 CARD14Q9BXL6 1004 aa7.49□□□□□ -1.21
SORT1-209ENST00000538502 MOV10L1Q9BXT6 1211 aaKnown RBP7.49□□□□□ -1.21
SORT1-209ENST00000538502 PITPNM3Q9BZ71 974 aa7.49□□□□□ -1.21
SORT1-209ENST00000538502 ZNF518AQ6AHZ1 1483 aa7.49□□□□□ -1.21
SORT1-209ENST00000538502 MYO1FO00160 1098 aa7.49□□□□□ -1.21
SORT1-209ENST00000538502 GSTA4O15217 222 aa7.49□□□□□ -1.21
SORT1-209ENST00000538502 HIBADHP31937 336 aaKnown RBP7.49□□□□□ -1.21
SORT1-209ENST00000538502 CYP2C19P33261 490 aa7.49□□□□□ -1.21
SORT1-209ENST00000538502 SCRN1Q12765 414 aa7.49□□□□□ -1.21
SORT1-209ENST00000538502 TBC1D1Q86TI0 1168 aaPredicted RBP7.49□□□□□ -1.21
SORT1-209ENST00000538502 FANCBQ8NB91 859 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms