RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 BZW2Q9Y6E2 419 aaKnown RBP18.35■□□□□ 0.53
SCARB1-205ENST00000538291 TTC36A6NLP5 189 aa18.34■□□□□ 0.53
SCARB1-205ENST00000538291 MYO1FO00160 1098 aa18.34■□□□□ 0.53
SCARB1-205ENST00000538291 FAM71BQ8TC56 605 aa18.34■□□□□ 0.53
SCARB1-205ENST00000538291 TSC1Q92574 1164 aa18.34■□□□□ 0.53
SCARB1-205ENST00000538291 THAP12O43422 761 aa18.34■□□□□ 0.53
SCARB1-205ENST00000538291 Q3C1V9 767 aa18.34■□□□□ 0.53
SCARB1-205ENST00000538291 MAP3K21Q5TCX8 1036 aa18.34■□□□□ 0.53
SCARB1-205ENST00000538291 FOXP1Q9H334 677 aaPredicted RBP18.34■□□□□ 0.53
SCARB1-205ENST00000538291 RABEP2Q9H5N1 569 aa18.34■□□□□ 0.53
SCARB1-205ENST00000538291 FAM135BQ49AJ0 1406 aa18.34■□□□□ 0.53
SCARB1-205ENST00000538291 IREB2P48200 963 aaKnown RBP18.34■□□□□ 0.53
SCARB1-205ENST00000538291 TRIM11Q96F44 468 aa18.34■□□□□ 0.53
SCARB1-205ENST00000538291 TRIM56Q9BRZ2 755 aaKnown RBP18.34■□□□□ 0.53
SCARB1-205ENST00000538291 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.34■□□□□ 0.53
SCARB1-205ENST00000538291 PSMC2P35998 433 aaKnown RBP18.34■□□□□ 0.53
SCARB1-205ENST00000538291 FAM149B1Q96BN6 582 aa18.34■□□□□ 0.53
SCARB1-205ENST00000538291 NCAPGQ9BPX3 1015 aa18.34■□□□□ 0.53
SCARB1-205ENST00000538291 DBNLQ9UJU6 430 aaKnown RBP18.34■□□□□ 0.53
SCARB1-205ENST00000538291 MAD1L1Q9Y6D9 718 aa18.34■□□□□ 0.53
SCARB1-205ENST00000538291 STAT2P52630 851 aa18.33■□□□□ 0.53
SCARB1-205ENST00000538291 KAZNQ674X7 775 aa18.33■□□□□ 0.53
SCARB1-205ENST00000538291 CEP170P1Q96L14 293 aa18.33■□□□□ 0.53
SCARB1-205ENST00000538291 RAD17O75943 681 aa18.33■□□□□ 0.53
SCARB1-205ENST00000538291 ARHGEF25Q86VW2 580 aa18.33■□□□□ 0.53
SCARB1-205ENST00000538291 C17orf53Q8N3J3 647 aaPredicted RBP18.33■□□□□ 0.53
SCARB1-205ENST00000538291 MIPOL1Q8TD10 442 aa18.33■□□□□ 0.52
SCARB1-205ENST00000538291 FAM81BQ96LP2 452 aa18.33■□□□□ 0.52
SCARB1-205ENST00000538291 FANCLQ9NW38 375 aa18.33■□□□□ 0.52
SCARB1-205ENST00000538291 ZNF215Q9UL58 517 aaPredicted RBP18.33■□□□□ 0.52
SCARB1-205ENST00000538291 SRGAP2BP0DMP2 458 aa18.33■□□□□ 0.52
SCARB1-205ENST00000538291 NR2F2P24468 414 aa18.33■□□□□ 0.52
SCARB1-205ENST00000538291 DESI2Q9BSY9 194 aa18.33■□□□□ 0.52
SCARB1-205ENST00000538291 SEC31BQ9NQW1 1179 aa18.33■□□□□ 0.52
SCARB1-205ENST00000538291 SLC12A6Q9UHW9 1150 aa18.33■□□□□ 0.52
SCARB1-205ENST00000538291 RIPOR2Q9Y4F9 1068 aa18.33■□□□□ 0.52
SCARB1-205ENST00000538291 BUB1BO60566 1050 aaPredicted RBP18.33■□□□□ 0.52
SCARB1-205ENST00000538291 S100BP04271 92 aaPredicted RBP18.33■□□□□ 0.52
SCARB1-205ENST00000538291 SAT1P21673 171 aa18.33■□□□□ 0.52
SCARB1-205ENST00000538291 DYNLL1P63167 89 aaKnown RBP18.33■□□□□ 0.52
SCARB1-205ENST00000538291 PTPROQ16827 1216 aa18.33■□□□□ 0.52
SCARB1-205ENST00000538291 DALRD3Q5D0E6 543 aaKnown RBP18.33■□□□□ 0.52
SCARB1-205ENST00000538291 CNOT6LQ96LI5 555 aaKnown RBP18.33■□□□□ 0.52
SCARB1-205ENST00000538291 RASSF4Q9H2L5 321 aa18.33■□□□□ 0.52
SCARB1-205ENST00000538291 DPH5Q9H2P9 285 aa18.33■□□□□ 0.52
SCARB1-205ENST00000538291 PI4KBQ9UBF8 816 aa18.33■□□□□ 0.52
SCARB1-205ENST00000538291 PALD1Q9ULE6 856 aa18.33■□□□□ 0.52
SCARB1-205ENST00000538291 CAPN12Q6ZSI9 719 aa18.32■□□□□ 0.52
SCARB1-205ENST00000538291 PASKQ96RG2 1323 aa18.32■□□□□ 0.52
SCARB1-205ENST00000538291 TXNDC9O14530 226 aa18.32■□□□□ 0.52
SCARB1-205ENST00000538291 FMNL1O95466 1100 aaPredicted RBP18.32■□□□□ 0.52
SCARB1-205ENST00000538291 KRT3P12035 628 aa18.32■□□□□ 0.52
SCARB1-205ENST00000538291 LMNB2Q03252 620 aa18.32■□□□□ 0.52
SCARB1-205ENST00000538291 TSTA3Q13630 321 aaPredicted RBP18.32■□□□□ 0.52
SCARB1-205ENST00000538291 GSDMAQ96QA5 445 aa18.32■□□□□ 0.52
SCARB1-205ENST00000538291 KLHL14Q9P2G3 628 aa18.32■□□□□ 0.52
SCARB1-205ENST00000538291 IGSF3O75054 1194 aa18.32■□□□□ 0.52
SCARB1-205ENST00000538291 APOA5Q6Q788 366 aa18.32■□□□□ 0.52
SCARB1-205ENST00000538291 RFX6Q8HWS3 928 aa18.32■□□□□ 0.52
SCARB1-205ENST00000538291 CEP120Q8N960 986 aa18.32■□□□□ 0.52
SCARB1-205ENST00000538291 STK17AQ9UEE5 414 aa18.32■□□□□ 0.52
SCARB1-205ENST00000538291 ZNF233A6NK53 670 aa18.32■□□□□ 0.52
SCARB1-205ENST00000538291 BRD3Q15059 726 aa18.32■□□□□ 0.52
SCARB1-205ENST00000538291 A0A1B0GUA9 196 aa18.31■□□□□ 0.52
SCARB1-205ENST00000538291 SCRN1Q12765 414 aa18.31■□□□□ 0.52
SCARB1-205ENST00000538291 PROSER3Q2NL68 480 aa18.31■□□□□ 0.52
SCARB1-205ENST00000538291 SYDE2Q5VT97 1194 aa18.31■□□□□ 0.52
SCARB1-205ENST00000538291 ZNF449Q6P9G9 518 aa18.31■□□□□ 0.52
SCARB1-205ENST00000538291 MAP4K1Q92918 833 aa18.31■□□□□ 0.52
SCARB1-205ENST00000538291 GDAP1L1Q96MZ0 367 aa18.31■□□□□ 0.52
SCARB1-205ENST00000538291 RUNDC3BQ96NL0 473 aa18.31■□□□□ 0.52
SCARB1-205ENST00000538291 TMEM206Q9H813 350 aa18.31■□□□□ 0.52
SCARB1-205ENST00000538291 CLIC4Q9Y696 253 aa18.31■□□□□ 0.52
SCARB1-205ENST00000538291 EIF3CLB5ME19 914 aaKnown RBP18.31■□□□□ 0.52
SCARB1-205ENST00000538291 SLC16A2P36021 539 aa18.31■□□□□ 0.52
SCARB1-205ENST00000538291 COPB1P53618 953 aaKnown RBP18.31■□□□□ 0.52
SCARB1-205ENST00000538291 CIAPIN1Q6FI81 312 aa18.31■□□□□ 0.52
SCARB1-205ENST00000538291 PPP1R2P3Q6NXS1 205 aa18.31■□□□□ 0.52
SCARB1-205ENST00000538291 EIF3CQ99613 913 aaKnown RBP18.31■□□□□ 0.52
SCARB1-205ENST00000538291 ERVV-1B6SEH8 477 aa18.31■□□□□ 0.52
SCARB1-205ENST00000538291 NDUFA8P51970 172 aa18.31■□□□□ 0.52
SCARB1-205ENST00000538291 FAM186BQ8IYM0 893 aa18.31■□□□□ 0.52
SCARB1-205ENST00000538291 CCDC170Q8IYT3 715 aa18.31■□□□□ 0.52
SCARB1-205ENST00000538291 RYBPQ8N488 228 aaPredicted RBP18.31■□□□□ 0.52
SCARB1-205ENST00000538291 TAB3Q8N5C8 712 aaPredicted RBP18.31■□□□□ 0.52
SCARB1-205ENST00000538291 NLRP7Q8WX94 980 aa18.31■□□□□ 0.52
SCARB1-205ENST00000538291 TMEM63CQ9P1W3 806 aa18.31■□□□□ 0.52
SCARB1-205ENST00000538291 PPP2R2CQ9Y2T4 447 aa18.31■□□□□ 0.52
SCARB1-205ENST00000538291 USH1CQ9Y6N9 552 aa18.31■□□□□ 0.52
SCARB1-205ENST00000538291 ECE1P42892 770 aa18.31■□□□□ 0.52
SCARB1-205ENST00000538291 ADAT2Q7Z6V5 191 aaKnown RBP18.31■□□□□ 0.52
SCARB1-205ENST00000538291 BAG5Q9UL15 447 aa18.31■□□□□ 0.52
SCARB1-205ENST00000538291 KRT10P13645 584 aa18.3■□□□□ 0.52
SCARB1-205ENST00000538291 YWHAGP61981 247 aaKnown RBP eCLIP18.3■□□□□ 0.52
SCARB1-205ENST00000538291 RTKN2Q8IZC4 609 aa18.3■□□□□ 0.52
SCARB1-205ENST00000538291 PIGSQ96S52 555 aa18.3■□□□□ 0.52
SCARB1-205ENST00000538291 ABT1Q9ULW3 272 aaKnown RBP18.3■□□□□ 0.52
SCARB1-205ENST00000538291 A0A1W2PQ27 194 aa18.3■□□□□ 0.52
SCARB1-205ENST00000538291 A0A1W2PQ64 194 aa18.3■□□□□ 0.52
SCARB1-205ENST00000538291 A0A1W2PQD8 194 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms