RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 RASEFQ8IZ41 740 aa5.89□□□□□ -1.47
LRP6-203ENST00000538239 ARMCX3Q9UH62 379 aaPredicted RBP5.89□□□□□ -1.47
LRP6-203ENST00000538239 ZBTB12Q9Y330 459 aaPredicted RBP5.89□□□□□ -1.47
LRP6-203ENST00000538239 UTP11Q9Y3A2 253 aaKnown RBP5.89□□□□□ -1.47
LRP6-203ENST00000538239 NEDD4P46934 1319 aa5.89□□□□□ -1.47
LRP6-203ENST00000538239 CDHR2Q9BYE9 1310 aa5.89□□□□□ -1.47
LRP6-203ENST00000538239 CEP104O60308 925 aa5.89□□□□□ -1.47
LRP6-203ENST00000538239 N4BP1O75113 896 aaKnown RBP5.89□□□□□ -1.47
LRP6-203ENST00000538239 NFX1Q12986 1120 aaKnown RBP5.89□□□□□ -1.47
LRP6-203ENST00000538239 FAM26FQ5R3K3 315 aa5.89□□□□□ -1.47
LRP6-203ENST00000538239 PRAMEF18Q5VWM3 479 aa5.89□□□□□ -1.47
LRP6-203ENST00000538239 PRR5LQ6MZQ0 368 aa5.89□□□□□ -1.47
LRP6-203ENST00000538239 GPR161Q8N6U8 529 aaKnown RBP5.89□□□□□ -1.47
LRP6-203ENST00000538239 CCDC89Q8N998 374 aa5.89□□□□□ -1.47
LRP6-203ENST00000538239 EEF2KMTQ96G04 330 aa5.89□□□□□ -1.47
LRP6-203ENST00000538239 STAT1P42224 750 aa5.89□□□□□ -1.47
LRP6-203ENST00000538239 MAGEA1P43355 309 aa5.89□□□□□ -1.47
LRP6-203ENST00000538239 TFAMQ00059 246 aaKnown RBP5.89□□□□□ -1.47
LRP6-203ENST00000538239 DNAJC21Q5F1R6 531 aaKnown RBP5.89□□□□□ -1.47
LRP6-203ENST00000538239 MFSD14CQ5VZR4 134 aa5.89□□□□□ -1.47
LRP6-203ENST00000538239 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.89□□□□□ -1.47
LRP6-203ENST00000538239 LARP4BQ92615 738 aaKnown RBP5.89□□□□□ -1.47
LRP6-203ENST00000538239 ACCSQ96QU6 501 aa5.89□□□□□ -1.47
LRP6-203ENST00000538239 ASIC3Q9UHC3 531 aa5.89□□□□□ -1.47
LRP6-203ENST00000538239 ZNRF3Q9ULT6 936 aa5.89□□□□□ -1.47
LRP6-203ENST00000538239 GTPBP6O43824 516 aaPredicted RBP5.88□□□□□ -1.47
LRP6-203ENST00000538239 NDUFA8P51970 172 aa5.88□□□□□ -1.47
LRP6-203ENST00000538239 POLR2FP61218 127 aaKnown RBP5.88□□□□□ -1.47
LRP6-203ENST00000538239 SCARF1Q14162 830 aa5.88□□□□□ -1.47
LRP6-203ENST00000538239 STXBP2Q15833 593 aa5.88□□□□□ -1.47
LRP6-203ENST00000538239 KLHL7Q8IXQ5 586 aa5.88□□□□□ -1.47
LRP6-203ENST00000538239 NSRP1Q9H0G5 558 aaKnown RBP5.88□□□□□ -1.47
LRP6-203ENST00000538239 PLEKHA4Q9H4M7 779 aa5.88□□□□□ -1.47
LRP6-203ENST00000538239 POLIQ9UNA4 740 aa5.88□□□□□ -1.47
LRP6-203ENST00000538239 CEP170BQ9Y4F5 1589 aaPredicted RBP5.88□□□□□ -1.47
LRP6-203ENST00000538239 RC3H1Q5TC82 1133 aaKnown RBP5.88□□□□□ -1.47
LRP6-203ENST00000538239 NAPGQ99747 312 aaPredicted RBP5.88□□□□□ -1.47
LRP6-203ENST00000538239 PRDM10Q9NQV6 1147 aa5.88□□□□□ -1.47
LRP6-203ENST00000538239 INPP5FQ9Y2H2 1132 aa5.88□□□□□ -1.47
LRP6-203ENST00000538239 THAP12O43422 761 aa5.88□□□□□ -1.47
LRP6-203ENST00000538239 ZBTB16Q05516 673 aa5.88□□□□□ -1.47
LRP6-203ENST00000538239 NR5A1Q13285 461 aa5.88□□□□□ -1.47
LRP6-203ENST00000538239 BARGINQ6ZT62 677 aa5.88□□□□□ -1.47
LRP6-203ENST00000538239 EXOC8Q8IYI6 725 aa5.88□□□□□ -1.47
LRP6-203ENST00000538239 NME8Q8N427 588 aa5.88□□□□□ -1.47
LRP6-203ENST00000538239 C7orf31Q8N865 590 aa5.88□□□□□ -1.47
LRP6-203ENST00000538239 TBC1D16Q8TBP0 767 aa5.88□□□□□ -1.47
LRP6-203ENST00000538239 TBC1D31Q96DN5 1066 aa5.88□□□□□ -1.47
LRP6-203ENST00000538239 NACC1Q96RE7 527 aa5.88□□□□□ -1.47
LRP6-203ENST00000538239 RMDN3Q96TC7 470 aa5.88□□□□□ -1.47
LRP6-203ENST00000538239 RBSNQ9H1K0 784 aa5.88□□□□□ -1.47
LRP6-203ENST00000538239 FOXP1Q9H334 677 aaPredicted RBP5.88□□□□□ -1.47
LRP6-203ENST00000538239 RPAP3Q9H6T3 665 aaPredicted RBP5.88□□□□□ -1.47
LRP6-203ENST00000538239 PCDHA6Q9UN73 950 aa5.88□□□□□ -1.47
LRP6-203ENST00000538239 PCDHA8Q9Y5H6 950 aa5.88□□□□□ -1.47
LRP6-203ENST00000538239 OPA1O60313 960 aa5.88□□□□□ -1.47
LRP6-203ENST00000538239 ADKP55263 362 aaKnown RBP5.88□□□□□ -1.47
LRP6-203ENST00000538239 PEX26Q7Z412 305 aa5.88□□□□□ -1.47
LRP6-203ENST00000538239 DAAM2Q86T65 1068 aa5.88□□□□□ -1.47
LRP6-203ENST00000538239 TTC30AQ86WT1 665 aa5.88□□□□□ -1.47
LRP6-203ENST00000538239 RYBPQ8N488 228 aaPredicted RBP5.88□□□□□ -1.47
LRP6-203ENST00000538239 BANK1Q8NDB2 785 aa5.88□□□□□ -1.47
LRP6-203ENST00000538239 PPM1EQ8WY54 764 aa5.88□□□□□ -1.47
LRP6-203ENST00000538239 ISCA1Q9BUE6 129 aa5.88□□□□□ -1.47
LRP6-203ENST00000538239 RAB20Q9NX57 234 aa5.88□□□□□ -1.47
LRP6-203ENST00000538239 PCDHA7Q9UN72 937 aa5.88□□□□□ -1.47
LRP6-203ENST00000538239 ARHGEF40Q8TER5 1519 aa5.88□□□□□ -1.47
LRP6-203ENST00000538239 NBPF26B4DH59 902 aa5.88□□□□□ -1.47
LRP6-203ENST00000538239 MTMR1Q13613 665 aa5.88□□□□□ -1.47
LRP6-203ENST00000538239 C6orf163Q5TEZ5 329 aa5.88□□□□□ -1.47
LRP6-203ENST00000538239 NBPF10Q6P3W6 841 aaKnown RBP5.88□□□□□ -1.47
LRP6-203ENST00000538239 KRBA2Q6ZNG9 492 aa5.88□□□□□ -1.47
LRP6-203ENST00000538239 NBPF15Q8N660 670 aa5.88□□□□□ -1.47
LRP6-203ENST00000538239 STRBPQ96SI9 672 aaKnown RBP5.88□□□□□ -1.47
LRP6-203ENST00000538239 ARFGAP3Q9NP61 516 aa5.88□□□□□ -1.47
LRP6-203ENST00000538239 hCG_1984214I3L0E3 225 aa5.88□□□□□ -1.47
LRP6-203ENST00000538239 PSMD14O00487 310 aa5.88□□□□□ -1.47
LRP6-203ENST00000538239 LAD1O00515 517 aa5.88□□□□□ -1.47
LRP6-203ENST00000538239 SLU7O95391 586 aaKnown RBP5.88□□□□□ -1.47
LRP6-203ENST00000538239 ATXN8OSP0DMR3 200 aa5.88□□□□□ -1.47
LRP6-203ENST00000538239 FOXO4P98177 505 aa5.88□□□□□ -1.47
LRP6-203ENST00000538239 MAP7D1Q3KQU3 841 aa5.88□□□□□ -1.47
LRP6-203ENST00000538239 SCARA5Q6ZMJ2 495 aa5.88□□□□□ -1.47
LRP6-203ENST00000538239 ZNF713Q8N859 430 aaPredicted RBP5.88□□□□□ -1.47
LRP6-203ENST00000538239 RSAD2Q8WXG1 361 aa5.88□□□□□ -1.47
LRP6-203ENST00000538239 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.88□□□□□ -1.47
LRP6-203ENST00000538239 UTYO14607 1347 aa5.87□□□□□ -1.47
LRP6-203ENST00000538239 FCER1AP12319 257 aa5.87□□□□□ -1.47
LRP6-203ENST00000538239 CDC25AP30304 524 aa5.87□□□□□ -1.47
LRP6-203ENST00000538239 DDIT3P35638 169 aa5.87□□□□□ -1.47
LRP6-203ENST00000538239 VAV2P52735 878 aa5.87□□□□□ -1.47
LRP6-203ENST00000538239 PPARDQ03181 441 aa5.87□□□□□ -1.47
LRP6-203ENST00000538239 MTMR2Q13614 643 aa5.87□□□□□ -1.47
LRP6-203ENST00000538239 ANGEL2Q5VTE6 544 aaKnown RBP5.87□□□□□ -1.47
LRP6-203ENST00000538239 KAZNQ674X7 775 aa5.87□□□□□ -1.47
LRP6-203ENST00000538239 TAB3Q8N5C8 712 aaPredicted RBP5.87□□□□□ -1.47
LRP6-203ENST00000538239 CACTINQ8WUQ7 758 aaKnown RBP5.87□□□□□ -1.47
LRP6-203ENST00000538239 CEP95Q96GE4 821 aa5.87□□□□□ -1.47
LRP6-203ENST00000538239 TMEM106CQ9BVX2 250 aa5.87□□□□□ -1.47
LRP6-203ENST00000538239 NXF1Q9UBU9 619 aaKnown RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms