RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 TACC3Q9Y6A5 838 aa8.16□□□□□ -1.1
MSH6-209ENST00000538136 NEMFO60524 1076 aa8.16□□□□□ -1.1
MSH6-209ENST00000538136 STAT6P42226 847 aa8.16□□□□□ -1.1
MSH6-209ENST00000538136 ANAPC15P60006 121 aa8.16□□□□□ -1.1
MSH6-209ENST00000538136 TRAF1Q13077 416 aa8.16□□□□□ -1.1
MSH6-209ENST00000538136 C15orf52Q6ZUT6 534 aaKnown RBP8.16□□□□□ -1.1
MSH6-209ENST00000538136 GPR142Q7Z601 462 aa8.16□□□□□ -1.1
MSH6-209ENST00000538136 AFG1LQ8WV93 481 aa8.16□□□□□ -1.1
MSH6-209ENST00000538136 PTPN18Q99952 460 aa8.16□□□□□ -1.1
MSH6-209ENST00000538136 ARHGEF35A5YM69 484 aa8.16□□□□□ -1.1
MSH6-209ENST00000538136 ALDH1A1P00352 501 aa8.16□□□□□ -1.1
MSH6-209ENST00000538136 CASP1P29466 404 aa8.16□□□□□ -1.1
MSH6-209ENST00000538136 USP8P40818 1118 aa8.16□□□□□ -1.1
MSH6-209ENST00000538136 TROAPQ12815 778 aa8.16□□□□□ -1.1
MSH6-209ENST00000538136 LRRC71Q8N4P6 559 aa8.16□□□□□ -1.1
MSH6-209ENST00000538136 TRAPPC12Q8WVT3 735 aa8.16□□□□□ -1.1
MSH6-209ENST00000538136 HMX1Q9NP08 348 aaPredicted RBP8.16□□□□□ -1.1
MSH6-209ENST00000538136 ORC4O43929 436 aa8.15□□□□□ -1.1
MSH6-209ENST00000538136 TBCAO75347 108 aaKnown RBP8.15□□□□□ -1.1
MSH6-209ENST00000538136 TNFAIP2Q03169 654 aa8.15□□□□□ -1.1
MSH6-209ENST00000538136 GLYCTKQ8IVS8 523 aa8.15□□□□□ -1.1
MSH6-209ENST00000538136 C7orf31Q8N865 590 aa8.15□□□□□ -1.1
MSH6-209ENST00000538136 NSUN7Q8NE18 718 aaKnown RBP8.15□□□□□ -1.1
MSH6-209ENST00000538136 GLT1D1Q96MS3 346 aa8.15□□□□□ -1.1
MSH6-209ENST00000538136 CERS4Q9HA82 394 aa8.15□□□□□ -1.1
MSH6-209ENST00000538136 BDP1A6H8Y1 2624 aa8.15□□□□□ -1.1
MSH6-209ENST00000538136 ASXL3Q9C0F0 2248 aa8.15□□□□□ -1.1
MSH6-209ENST00000538136 ARHGAP4P98171 946 aa8.15□□□□□ -1.1
MSH6-209ENST00000538136 NEK8Q86SG6 692 aa8.15□□□□□ -1.1
MSH6-209ENST00000538136 CEP170P1Q96L14 293 aa8.15□□□□□ -1.1
MSH6-209ENST00000538136 KIAA1683Q9H0B3 1180 aa8.15□□□□□ -1.1
MSH6-209ENST00000538136 KIAA1024Q9UPX6 916 aa8.15□□□□□ -1.1
MSH6-209ENST00000538136 PCDHB6Q9Y5E3 794 aa8.15□□□□□ -1.1
MSH6-209ENST00000538136 PPP2R3BQ9Y5P8 575 aa8.15□□□□□ -1.1
MSH6-209ENST00000538136 ZMYM6O95789 1325 aa8.15□□□□□ -1.1
MSH6-209ENST00000538136 SALL1Q9NSC2 1324 aa8.15□□□□□ -1.1
MSH6-209ENST00000538136 KBTBD13C9JR72 458 aa8.15□□□□□ -1.11
MSH6-209ENST00000538136 DDAH1O94760 285 aa8.15□□□□□ -1.11
MSH6-209ENST00000538136 DSG3P32926 999 aa8.15□□□□□ -1.11
MSH6-209ENST00000538136 RGS2P41220 211 aa8.15□□□□□ -1.11
MSH6-209ENST00000538136 PSMC6P62333 389 aa8.15□□□□□ -1.11
MSH6-209ENST00000538136 KARSQ15046 597 aaKnown RBP8.15□□□□□ -1.11
MSH6-209ENST00000538136 DCAF4Q8WV16 495 aa8.15□□□□□ -1.11
MSH6-209ENST00000538136 LBHD1Q9BQE6 289 aaPredicted RBP8.15□□□□□ -1.11
MSH6-209ENST00000538136 CFAP45Q9UL16 551 aa8.15□□□□□ -1.11
MSH6-209ENST00000538136 ANKRD26Q9UPS8 1709 aa8.15□□□□□ -1.11
MSH6-209ENST00000538136 MDM2Q00987 491 aaPredicted RBP8.14□□□□□ -1.11
MSH6-209ENST00000538136 RRAGBQ5VZM2 374 aa8.14□□□□□ -1.11
MSH6-209ENST00000538136 MYOCDQ8IZQ8 938 aa8.14□□□□□ -1.11
MSH6-209ENST00000538136 USP28Q96RU2 1077 aa8.14□□□□□ -1.11
MSH6-209ENST00000538136 ANKFY1Q9P2R3 1169 aa8.14□□□□□ -1.11
MSH6-209ENST00000538136 GABBR1Q9UBS5 961 aa8.14□□□□□ -1.11
MSH6-209ENST00000538136 SPTLC2O15270 562 aa8.14□□□□□ -1.11
MSH6-209ENST00000538136 CA12O43570 354 aa8.14□□□□□ -1.11
MSH6-209ENST00000538136 CYTH3O43739 400 aa8.14□□□□□ -1.11
MSH6-209ENST00000538136 TLR2O60603 784 aa8.14□□□□□ -1.11
MSH6-209ENST00000538136 CTCFP49711 727 aaPredicted RBP8.14□□□□□ -1.11
MSH6-209ENST00000538136 POLGP54098 1239 aaPredicted RBP8.14□□□□□ -1.11
MSH6-209ENST00000538136 FSTL1Q12841 308 aa8.14□□□□□ -1.11
MSH6-209ENST00000538136 SASS6Q6UVJ0 657 aa8.14□□□□□ -1.11
MSH6-209ENST00000538136 GRAMD1CQ8IYS0 662 aa8.14□□□□□ -1.11
MSH6-209ENST00000538136 ERO1AQ96HE7 468 aa8.14□□□□□ -1.11
MSH6-209ENST00000538136 XPNPEP3Q9NQH7 507 aa8.14□□□□□ -1.11
MSH6-209ENST00000538136 RABGAP1Q9Y3P9 1069 aa8.14□□□□□ -1.11
MSH6-209ENST00000538136 AFG3L2Q9Y4W6 797 aa8.14□□□□□ -1.11
MSH6-209ENST00000538136 CNTNAP1P78357 1384 aa8.14□□□□□ -1.11
MSH6-209ENST00000538136 POLR2DO15514 142 aaKnown RBP8.14□□□□□ -1.11
MSH6-209ENST00000538136 LIFRP42702 1097 aa8.14□□□□□ -1.11
MSH6-209ENST00000538136 NPEPPSP55786 919 aa8.14□□□□□ -1.11
MSH6-209ENST00000538136 TTLL4Q14679 1199 aa8.14□□□□□ -1.11
MSH6-209ENST00000538136 ALX1Q15699 326 aa8.14□□□□□ -1.11
MSH6-209ENST00000538136 CATSPERGQ6ZRH7 1159 aa8.14□□□□□ -1.11
MSH6-209ENST00000538136 ERMNQ8TAM6 284 aa8.14□□□□□ -1.11
MSH6-209ENST00000538136 NLRP7Q8WX94 980 aa8.14□□□□□ -1.11
MSH6-209ENST00000538136 PDCL3Q9H2J4 239 aa8.14□□□□□ -1.11
MSH6-209ENST00000538136 RBPJLQ9UBG7 517 aa8.14□□□□□ -1.11
MSH6-209ENST00000538136 FBXO40Q9UH90 709 aa8.14□□□□□ -1.11
MSH6-209ENST00000538136 PUF60Q9UHX1 559 aaKnown RBP8.14□□□□□ -1.11
MSH6-209ENST00000538136 CLIC4Q9Y696 253 aa8.14□□□□□ -1.11
MSH6-209ENST00000538136 M0QZ92 97 aa8.13□□□□□ -1.11
MSH6-209ENST00000538136 FAM13AO94988 1023 aa8.13□□□□□ -1.11
MSH6-209ENST00000538136 ZSCAN22P10073 491 aaPredicted RBP8.13□□□□□ -1.11
MSH6-209ENST00000538136 GCLCP48506 637 aaPredicted RBP8.13□□□□□ -1.11
MSH6-209ENST00000538136 ZFYVE27Q5T4F4 411 aa8.13□□□□□ -1.11
MSH6-209ENST00000538136 TNPO1Q92973 898 aaKnown RBP8.13□□□□□ -1.11
MSH6-209ENST00000538136 SEPT11Q9NVA2 429 aaKnown RBP8.13□□□□□ -1.11
MSH6-209ENST00000538136 CCDC39Q9UFE4 941 aa8.13□□□□□ -1.11
MSH6-209ENST00000538136 TOGARAM1Q9Y4F4 1720 aa8.13□□□□□ -1.11
MSH6-209ENST00000538136 IPO5O00410 1097 aaKnown RBP8.13□□□□□ -1.11
MSH6-209ENST00000538136 CYP2C9P11712 490 aa8.13□□□□□ -1.11
MSH6-209ENST00000538136 CCND2P30279 289 aa8.13□□□□□ -1.11
MSH6-209ENST00000538136 ARPP19P56211 112 aa8.13□□□□□ -1.11
MSH6-209ENST00000538136 CCDC144BQ3MJ40 725 aa8.13□□□□□ -1.11
MSH6-209ENST00000538136 FKBP1CQ5VVH2 108 aa8.13□□□□□ -1.11
MSH6-209ENST00000538136 PLA2G4FQ68DD2 849 aa8.13□□□□□ -1.11
MSH6-209ENST00000538136 ARMCX2Q7L311 632 aa8.13□□□□□ -1.11
MSH6-209ENST00000538136 POTEDQ86YR6 584 aa8.13□□□□□ -1.11
MSH6-209ENST00000538136 STARD7Q9NQZ5 370 aa8.13□□□□□ -1.11
MSH6-209ENST00000538136 MAD2L2Q9UI95 211 aa8.13□□□□□ -1.11
MSH6-209ENST00000538136 TLL2Q9Y6L7 1015 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms