RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 L2HGDHQ9H9P8 463 aa17.54■□□□□ 0.4
MKS1-204ENST00000537529 DNAI1Q9UI46 699 aa17.54■□□□□ 0.4
MKS1-204ENST00000537529 HERC5Q9UII4 1024 aaKnown RBP17.54■□□□□ 0.4
MKS1-204ENST00000537529 ARFGEF1Q9Y6D6 1849 aa17.53■□□□□ 0.4
MKS1-204ENST00000537529 LGALS16A8MUM7 142 aa17.53■□□□□ 0.4
MKS1-204ENST00000537529 GH2P01242 217 aa17.53■□□□□ 0.4
MKS1-204ENST00000537529 USP11P51784 963 aa17.53■□□□□ 0.4
MKS1-204ENST00000537529 UBXN1Q04323 297 aa17.53■□□□□ 0.4
MKS1-204ENST00000537529 MCM6Q14566 821 aa17.53■□□□□ 0.4
MKS1-204ENST00000537529 SYDE2Q5VT97 1194 aa17.53■□□□□ 0.4
MKS1-204ENST00000537529 TRIM65Q6PJ69 517 aa17.53■□□□□ 0.4
MKS1-204ENST00000537529 UNC13DQ70J99 1090 aa17.53■□□□□ 0.4
MKS1-204ENST00000537529 CSGALNACT2Q8N6G5 542 aa17.53■□□□□ 0.4
MKS1-204ENST00000537529 ANO3Q9BYT9 981 aa17.53■□□□□ 0.4
MKS1-204ENST00000537529 HDAC9Q9UKV0 1011 aa17.53■□□□□ 0.4
MKS1-204ENST00000537529 KDM3AQ9Y4C1 1321 aa17.53■□□□□ 0.4
MKS1-204ENST00000537529 CCDC175P0C221 793 aa17.52■□□□□ 0.4
MKS1-204ENST00000537529 FECHP22830 423 aa17.52■□□□□ 0.4
MKS1-204ENST00000537529 IKQ13123 557 aaPredicted RBP17.52■□□□□ 0.4
MKS1-204ENST00000537529 HAS1Q92839 578 aa17.52■□□□□ 0.4
MKS1-204ENST00000537529 PSMD1Q99460 953 aa17.52■□□□□ 0.4
MKS1-204ENST00000537529 ZNF215Q9UL58 517 aaPredicted RBP17.52■□□□□ 0.4
MKS1-204ENST00000537529 SPDYE2BA6NHP3 402 aa17.52■□□□□ 0.39
MKS1-204ENST00000537529 MYMKA6NI61 221 aa17.52■□□□□ 0.39
MKS1-204ENST00000537529 SOWAHDA6NJG2 315 aa17.52■□□□□ 0.39
MKS1-204ENST00000537529 USP17L15C9J2P7 530 aa17.52■□□□□ 0.39
MKS1-204ENST00000537529 USP17L13C9JLJ4 530 aa17.52■□□□□ 0.39
MKS1-204ENST00000537529 USP17L11C9JVI0 530 aa17.52■□□□□ 0.39
MKS1-204ENST00000537529 USP17L18D6R9N7 530 aa17.52■□□□□ 0.39
MKS1-204ENST00000537529 USP17L22D6RA61 530 aa17.52■□□□□ 0.39
MKS1-204ENST00000537529 USP17L17D6RBQ6 530 aa17.52■□□□□ 0.39
MKS1-204ENST00000537529 USP17L19D6RCP7 530 aa17.52■□□□□ 0.39
MKS1-204ENST00000537529 USP17L20D6RJB6 530 aa17.52■□□□□ 0.39
MKS1-204ENST00000537529 SLC26A4O43511 780 aa17.52■□□□□ 0.39
MKS1-204ENST00000537529 SPDYE6P0CI01 402 aa17.52■□□□□ 0.39
MKS1-204ENST00000537529 BMP3P12645 472 aa17.52■□□□□ 0.39
MKS1-204ENST00000537529 FXR1P51114 621 aaKnown RBP eCLIP17.52■□□□□ 0.39
MKS1-204ENST00000537529 USP17L24Q0WX57 530 aa17.52■□□□□ 0.39
MKS1-204ENST00000537529 STK4Q13043 487 aa17.52■□□□□ 0.39
MKS1-204ENST00000537529 USP17L6PQ6QN14 398 aa17.52■□□□□ 0.39
MKS1-204ENST00000537529 FBXO11Q86XK2 927 aa17.52■□□□□ 0.39
MKS1-204ENST00000537529 DUSP9Q99956 384 aaKnown RBP17.52■□□□□ 0.39
MKS1-204ENST00000537529 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.52■□□□□ 0.39
MKS1-204ENST00000537529 PSME4Q14997 1843 aa17.51■□□□□ 0.39
MKS1-204ENST00000537529 A0A1W2PQC6 194 aa17.51■□□□□ 0.39
MKS1-204ENST00000537529 FCER1AP12319 257 aa17.51■□□□□ 0.39
MKS1-204ENST00000537529 MOXD1Q6UVY6 613 aa17.51■□□□□ 0.39
MKS1-204ENST00000537529 MB21D1Q8N884 522 aa17.51■□□□□ 0.39
MKS1-204ENST00000537529 NUP88Q99567 741 aaPredicted RBP17.51■□□□□ 0.39
MKS1-204ENST00000537529 PCDHA12Q9UN75 941 aa17.51■□□□□ 0.39
MKS1-204ENST00000537529 CYP3A7-CYP3A51PA0A087WV96 503 aa17.51■□□□□ 0.39
MKS1-204ENST00000537529 CYP3A7P24462 503 aa17.51■□□□□ 0.39
MKS1-204ENST00000537529 DLGAP5Q15398 846 aa17.51■□□□□ 0.39
MKS1-204ENST00000537529 BTNL9Q6UXG8 535 aa17.51■□□□□ 0.39
MKS1-204ENST00000537529 LARGE2Q8N3Y3 721 aa17.51■□□□□ 0.39
MKS1-204ENST00000537529 PDCL2Q8N4E4 241 aa17.51■□□□□ 0.39
MKS1-204ENST00000537529 DESI2Q9BSY9 194 aa17.51■□□□□ 0.39
MKS1-204ENST00000537529 NT5C3AQ9H0P0 336 aa17.51■□□□□ 0.39
MKS1-204ENST00000537529 ABHD10Q9NUJ1 306 aa17.51■□□□□ 0.39
MKS1-204ENST00000537529 TCP10L2B9ZVM9 353 aa17.5■□□□□ 0.39
MKS1-204ENST00000537529 VIL1P09327 827 aaKnown RBP17.5■□□□□ 0.39
MKS1-204ENST00000537529 HYIQ5T013 277 aa17.5■□□□□ 0.39
MKS1-204ENST00000537529 ANKRD40Q6AI12 368 aa17.5■□□□□ 0.39
MKS1-204ENST00000537529 RAD9BQ6WBX8 426 aa17.5■□□□□ 0.39
MKS1-204ENST00000537529 TMTC1Q8IUR5 882 aa17.5■□□□□ 0.39
MKS1-204ENST00000537529 KIAA0895Q8NCT3 520 aa17.5■□□□□ 0.39
MKS1-204ENST00000537529 MBOAT7Q96N66 472 aa17.5■□□□□ 0.39
MKS1-204ENST00000537529 NUDT12Q9BQG2 462 aa17.5■□□□□ 0.39
MKS1-204ENST00000537529 ARHGEF10LQ9HCE6 1279 aa17.5■□□□□ 0.39
MKS1-204ENST00000537529 ZNF70Q9UC06 446 aaPredicted RBP17.5■□□□□ 0.39
MKS1-204ENST00000537529 PES1O00541 588 aaKnown RBP17.49■□□□□ 0.39
MKS1-204ENST00000537529 MEIS2O14770 477 aa17.49■□□□□ 0.39
MKS1-204ENST00000537529 DNM2P50570 870 aa17.49■□□□□ 0.39
MKS1-204ENST00000537529 JAG1P78504 1218 aa17.49■□□□□ 0.39
MKS1-204ENST00000537529 MTF1Q14872 753 aa17.49■□□□□ 0.39
MKS1-204ENST00000537529 SLFN12Q8IYM2 578 aa17.49■□□□□ 0.39
MKS1-204ENST00000537529 OGFOD1Q8N543 542 aa17.49■□□□□ 0.39
MKS1-204ENST00000537529 FAM151AQ8WW52 585 aa17.49■□□□□ 0.39
MKS1-204ENST00000537529 KCNMB3Q9NPA1 279 aa17.49■□□□□ 0.39
MKS1-204ENST00000537529 ADGRG1Q9Y653 693 aa17.49■□□□□ 0.39
MKS1-204ENST00000537529 PSMD14O00487 310 aa17.49■□□□□ 0.39
MKS1-204ENST00000537529 RAD17O75943 681 aa17.49■□□□□ 0.39
MKS1-204ENST00000537529 FOSP01100 380 aaPredicted RBP17.49■□□□□ 0.39
MKS1-204ENST00000537529 PSMD2Q13200 908 aa17.49■□□□□ 0.39
MKS1-204ENST00000537529 RRP1BQ14684 758 aaKnown RBP17.49■□□□□ 0.39
MKS1-204ENST00000537529 ZNF507Q8TCN5 953 aa17.49■□□□□ 0.39
MKS1-204ENST00000537529 CNOT6LQ96LI5 555 aaKnown RBP17.49■□□□□ 0.39
MKS1-204ENST00000537529 GMLQ99445 158 aa17.49■□□□□ 0.39
MKS1-204ENST00000537529 SLC39A2Q9NP94 309 aa17.49■□□□□ 0.39
MKS1-204ENST00000537529 CLRN2A0PK11 232 aa17.48■□□□□ 0.39
MKS1-204ENST00000537529 PRKCSHP14314 528 aaPredicted RBP17.48■□□□□ 0.39
MKS1-204ENST00000537529 CASQ1P31415 396 aa17.48■□□□□ 0.39
MKS1-204ENST00000537529 MMP14P50281 582 aa17.48■□□□□ 0.39
MKS1-204ENST00000537529 GNG11P61952 73 aa17.48■□□□□ 0.39
MKS1-204ENST00000537529 ARHGAP4P98171 946 aa17.48■□□□□ 0.39
MKS1-204ENST00000537529 TRAF1Q13077 416 aa17.48■□□□□ 0.39
MKS1-204ENST00000537529 CYP26C1Q6V0L0 522 aa17.48■□□□□ 0.39
MKS1-204ENST00000537529 DYMQ7RTS9 669 aa17.48■□□□□ 0.39
MKS1-204ENST00000537529 DDX12PQ92771 950 aa17.48■□□□□ 0.39
MKS1-204ENST00000537529 TUBGCP2Q9BSJ2 902 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms